RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 SHTN1A0MZ66 631 aa12.72□□□□□ -0.37
HLA-DMB-259ENST00000438510 SPDYE2BA6NHP3 402 aa12.72□□□□□ -0.37
HLA-DMB-259ENST00000438510 SPDYE6P0CI01 402 aa12.72□□□□□ -0.37
HLA-DMB-259ENST00000438510 EPS15P42566 896 aa12.72□□□□□ -0.37
HLA-DMB-259ENST00000438510 BTDP43251 543 aa12.72□□□□□ -0.37
HLA-DMB-259ENST00000438510 C1QTNF8P60827 252 aa12.72□□□□□ -0.37
HLA-DMB-259ENST00000438510 TBC1D10BQ4KMP7 808 aaPredicted RBP12.72□□□□□ -0.37
HLA-DMB-259ENST00000438510 SAMD7Q7Z3H4 446 aa12.72□□□□□ -0.37
HLA-DMB-259ENST00000438510 PNMA8AQ86V59 439 aaPredicted RBP12.72□□□□□ -0.37
HLA-DMB-259ENST00000438510 TAF1DQ9H5J8 278 aaPredicted RBP12.72□□□□□ -0.37
HLA-DMB-259ENST00000438510 DDX60LQ5H9U9 1706 aaKnown RBP12.71□□□□□ -0.37
HLA-DMB-259ENST00000438510 BAZ2AQ9UIF9 1905 aaKnown RBP12.71□□□□□ -0.37
HLA-DMB-259ENST00000438510 MAGEB6P1A0A0J9YX57 407 aa12.71□□□□□ -0.37
HLA-DMB-259ENST00000438510 WNT10BO00744 389 aa12.71□□□□□ -0.37
HLA-DMB-259ENST00000438510 CDC45O75419 566 aa12.71□□□□□ -0.37
HLA-DMB-259ENST00000438510 ZMYM1Q5SVZ6 1142 aa12.71□□□□□ -0.37
HLA-DMB-259ENST00000438510 RBM26Q5T8P6 1007 aaKnown RBP12.71□□□□□ -0.37
HLA-DMB-259ENST00000438510 ADGRA1Q86SQ6 560 aa12.71□□□□□ -0.37
HLA-DMB-259ENST00000438510 ZNF526Q8TF50 670 aaPredicted RBP12.71□□□□□ -0.37
HLA-DMB-259ENST00000438510 RUFY2Q8WXA3 655 aa12.71□□□□□ -0.37
HLA-DMB-259ENST00000438510 AIDAQ96BJ3 306 aa12.71□□□□□ -0.37
HLA-DMB-259ENST00000438510 ZBED3Q96IU2 234 aaPredicted RBP12.71□□□□□ -0.37
HLA-DMB-259ENST00000438510 RRAGCQ9HB90 399 aa12.71□□□□□ -0.37
HLA-DMB-259ENST00000438510 GPBP1L1Q9HC44 474 aaPredicted RBP12.71□□□□□ -0.37
HLA-DMB-259ENST00000438510 HELLSQ9NRZ9 838 aa12.71□□□□□ -0.37
HLA-DMB-259ENST00000438510 AATFQ9NY61 560 aaKnown RBP eCLIP12.71□□□□□ -0.37
HLA-DMB-259ENST00000438510 TMOD2Q9NZR1 351 aa12.71□□□□□ -0.37
HLA-DMB-259ENST00000438510 RAD50Q92878 1312 aa12.7□□□□□ -0.38
HLA-DMB-259ENST00000438510 LAMA4Q16363 1823 aa12.7□□□□□ -0.38
HLA-DMB-259ENST00000438510 POTECB2RU33 542 aa12.7□□□□□ -0.38
HLA-DMB-259ENST00000438510 MFAP1P55081 439 aaKnown RBP12.7□□□□□ -0.38
HLA-DMB-259ENST00000438510 PPP4CP60510 307 aa12.7□□□□□ -0.38
HLA-DMB-259ENST00000438510 NMIQ13287 307 aaPredicted RBP12.7□□□□□ -0.38
HLA-DMB-259ENST00000438510 APOBEC3HQ6NTF7 200 aaKnown RBP12.7□□□□□ -0.38
HLA-DMB-259ENST00000438510 MIGA1Q8NAN2 632 aa12.7□□□□□ -0.38
HLA-DMB-259ENST00000438510 TRPM4Q8TD43 1214 aa12.7□□□□□ -0.38
HLA-DMB-259ENST00000438510 PRMT6Q96LA8 375 aaPredicted RBP12.7□□□□□ -0.38
HLA-DMB-259ENST00000438510 PITPNM2Q9BZ72 1349 aa12.69□□□□□ -0.38
HLA-DMB-259ENST00000438510 MYH8P13535 1937 aa12.69□□□□□ -0.38
HLA-DMB-259ENST00000438510 MBD4O95243 580 aa12.69□□□□□ -0.38
HLA-DMB-259ENST00000438510 EGFRP00533 1210 aa12.69□□□□□ -0.38
HLA-DMB-259ENST00000438510 CHGBP05060 677 aa12.69□□□□□ -0.38
HLA-DMB-259ENST00000438510 CHMLP26374 656 aa12.69□□□□□ -0.38
HLA-DMB-259ENST00000438510 NBPF9Q3BBW0 867 aa12.69□□□□□ -0.38
HLA-DMB-259ENST00000438510 SPDYE2Q495Y8 402 aa12.69□□□□□ -0.38
HLA-DMB-259ENST00000438510 MCMDC2Q4G0Z9 681 aa12.69□□□□□ -0.38
HLA-DMB-259ENST00000438510 EAPPQ56P03 285 aaPredicted RBP12.69□□□□□ -0.38
HLA-DMB-259ENST00000438510 CWC27Q6UX04 472 aaKnown RBP12.69□□□□□ -0.38
HLA-DMB-259ENST00000438510 ZC3H15Q8WU90 426 aaKnown RBP12.69□□□□□ -0.38
HLA-DMB-259ENST00000438510 RIOK1Q9BRS2 568 aaKnown RBP12.69□□□□□ -0.38
HLA-DMB-259ENST00000438510 CRNKL1Q9BZJ0 848 aaKnown RBP12.69□□□□□ -0.38
HLA-DMB-259ENST00000438510 PUS7LQ9H0K6 701 aaKnown RBP12.69□□□□□ -0.38
HLA-DMB-259ENST00000438510 NMRK2Q9NPI5 230 aa12.69□□□□□ -0.38
HLA-DMB-259ENST00000438510 USP40Q9NVE5 1235 aa12.69□□□□□ -0.38
HLA-DMB-259ENST00000438510 A0A0D9SFI3 127 aa12.68□□□□□ -0.38
HLA-DMB-259ENST00000438510 M0R2C6 588 aa12.68□□□□□ -0.38
HLA-DMB-259ENST00000438510 GPAA1O43292 621 aa12.68□□□□□ -0.38
HLA-DMB-259ENST00000438510 GNAT2P19087 354 aa12.68□□□□□ -0.38
HLA-DMB-259ENST00000438510 TNNI2P48788 182 aa12.68□□□□□ -0.38
HLA-DMB-259ENST00000438510 DYNLL1P63167 89 aaKnown RBP12.68□□□□□ -0.38
HLA-DMB-259ENST00000438510 TNFAIP1Q13829 316 aa12.68□□□□□ -0.38
HLA-DMB-259ENST00000438510 SLFNL1Q499Z3 407 aa12.68□□□□□ -0.38
HLA-DMB-259ENST00000438510 CDC42EP5Q6NZY7 148 aa12.68□□□□□ -0.38
HLA-DMB-259ENST00000438510 APOBEC3FQ8IUX4 373 aaKnown RBP12.68□□□□□ -0.38
HLA-DMB-259ENST00000438510 TEX11Q8IYF3 940 aa12.68□□□□□ -0.38
HLA-DMB-259ENST00000438510 LCORLQ8N3X6 602 aa12.68□□□□□ -0.38
HLA-DMB-259ENST00000438510 OSBP2Q969R2 916 aa12.68□□□□□ -0.38
HLA-DMB-259ENST00000438510 FAM227BQ96M60 508 aa12.68□□□□□ -0.38
HLA-DMB-259ENST00000438510 TDRD3Q9H7E2 651 aaKnown RBP12.68□□□□□ -0.38
HLA-DMB-259ENST00000438510 VEZTQ9HBM0 779 aa12.68□□□□□ -0.38
HLA-DMB-259ENST00000438510 PCDHAC2Q9Y5I4 1007 aa12.68□□□□□ -0.38
HLA-DMB-259ENST00000438510 CCDC171Q6TFL3 1326 aa12.67□□□□□ -0.38
HLA-DMB-259ENST00000438510 CLRN2A0PK11 232 aa12.67□□□□□ -0.38
HLA-DMB-259ENST00000438510 HIRAP54198 1017 aaPredicted RBP12.67□□□□□ -0.38
HLA-DMB-259ENST00000438510 RHBDL3P58872 404 aa12.67□□□□□ -0.38
HLA-DMB-259ENST00000438510 ANGEL2Q5VTE6 544 aaKnown RBP12.67□□□□□ -0.38
HLA-DMB-259ENST00000438510 FKBP1CQ5VVH2 108 aa12.67□□□□□ -0.38
HLA-DMB-259ENST00000438510 LDHDQ86WU2 507 aa12.67□□□□□ -0.38
HLA-DMB-259ENST00000438510 SH3RF3Q8TEJ3 882 aaPredicted RBP12.67□□□□□ -0.38
HLA-DMB-259ENST00000438510 DCPSQ96C86 337 aaKnown RBP12.67□□□□□ -0.38
HLA-DMB-259ENST00000438510 DDRGK1Q96HY6 314 aa12.67□□□□□ -0.38
HLA-DMB-259ENST00000438510 SEC62Q99442 399 aaKnown RBP12.67□□□□□ -0.38
HLA-DMB-259ENST00000438510 ARMT1Q9H993 441 aa12.67□□□□□ -0.38
HLA-DMB-259ENST00000438510 GGA3Q9NZ52 723 aa12.67□□□□□ -0.38
HLA-DMB-259ENST00000438510 ZNF70Q9UC06 446 aaPredicted RBP12.67□□□□□ -0.38
HLA-DMB-259ENST00000438510 CLEC11AQ9Y240 323 aa12.67□□□□□ -0.38
HLA-DMB-259ENST00000438510 TRPM7Q96QT4 1865 aa12.67□□□□□ -0.38
HLA-DMB-259ENST00000438510 RPAP1Q9BWH6 1393 aaPredicted RBP12.67□□□□□ -0.38
HLA-DMB-259ENST00000438510 COL2A1P02458 1487 aaPredicted RBP12.66□□□□□ -0.38
HLA-DMB-259ENST00000438510 EIF5BO60841 1220 aaKnown RBP12.66□□□□□ -0.38
HLA-DMB-259ENST00000438510 USP5P45974 858 aa12.66□□□□□ -0.38
HLA-DMB-259ENST00000438510 STRBPQ96SI9 672 aaKnown RBP12.66□□□□□ -0.38
HLA-DMB-259ENST00000438510 IDI2Q9BXS1 227 aa12.66□□□□□ -0.38
HLA-DMB-259ENST00000438510 SGSM2O43147 1006 aa12.65□□□□□ -0.38
HLA-DMB-259ENST00000438510 ENTPD3O75355 529 aa12.65□□□□□ -0.38
HLA-DMB-259ENST00000438510 WDHD1O75717 1129 aaPredicted RBP12.65□□□□□ -0.38
HLA-DMB-259ENST00000438510 PICALMQ13492 652 aa12.65□□□□□ -0.38
HLA-DMB-259ENST00000438510 FAM83AQ86UY5 434 aa12.65□□□□□ -0.38
HLA-DMB-259ENST00000438510 SULF1Q8IWU6 871 aa12.65□□□□□ -0.38
HLA-DMB-259ENST00000438510 ESYT1Q9BSJ8 1104 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms