RNA–Protein interactions for RNA: ENST00000438191.1

RPE-209, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-209ENST00000438191 PHOX2BQ99453 314 aa12.07□□□□□ -0.48
RPE-209ENST00000438191 POLR3GLQ9BT43 218 aa12.07□□□□□ -0.48
RPE-209ENST00000438191 TMEM39BQ9GZU3 492 aa12.07□□□□□ -0.48
RPE-209ENST00000438191 ZNF70Q9UC06 446 aaPredicted RBP12.07□□□□□ -0.48
RPE-209ENST00000438191 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.06□□□□□ -0.48
RPE-209ENST00000438191 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.06□□□□□ -0.48
RPE-209ENST00000438191 F8W031 263 aaPredicted RBP12.06□□□□□ -0.48
RPE-209ENST00000438191 MAP3K21Q5TCX8 1036 aa12.06□□□□□ -0.48
RPE-209ENST00000438191 CACNA1BQ00975 2339 aa12.06□□□□□ -0.48
RPE-209ENST00000438191 FRMPD3Q5JV73 1810 aa12.06□□□□□ -0.48
RPE-209ENST00000438191 PRKAR2BP31323 418 aa12.05□□□□□ -0.48
RPE-209ENST00000438191 CCT4P50991 539 aaKnown RBP12.05□□□□□ -0.48
RPE-209ENST00000438191 RTP1P59025 263 aa12.05□□□□□ -0.48
RPE-209ENST00000438191 AIMP1Q12904 312 aaKnown RBP12.05□□□□□ -0.48
RPE-209ENST00000438191 LHX8Q68G74 356 aa12.05□□□□□ -0.48
RPE-209ENST00000438191 ISCA1Q9BUE6 129 aa12.05□□□□□ -0.48
RPE-209ENST00000438191 SENP6Q9GZR1 1112 aaPredicted RBP12.05□□□□□ -0.48
RPE-209ENST00000438191 CFAP54Q96N23 3096 aa12.05□□□□□ -0.48
RPE-209ENST00000438191 PLXNB2O15031 1838 aa12.04□□□□□ -0.48
RPE-209ENST00000438191 PLXNA1Q9UIW2 1896 aa12.04□□□□□ -0.48
RPE-209ENST00000438191 REV3LO60673 3130 aa12.04□□□□□ -0.48
RPE-209ENST00000438191 HTATSF1O43719 755 aaKnown RBP12.04□□□□□ -0.48
RPE-209ENST00000438191 IGFBP4P22692 258 aa12.04□□□□□ -0.48
RPE-209ENST00000438191 ATN1P54259 1190 aaPredicted RBP12.04□□□□□ -0.48
RPE-209ENST00000438191 ANKRD18AQ8IVF6 992 aa12.04□□□□□ -0.48
RPE-209ENST00000438191 XAGE3Q8WTP9 111 aa12.04□□□□□ -0.48
RPE-209ENST00000438191 TRIB2Q92519 343 aa12.04□□□□□ -0.48
RPE-209ENST00000438191 GJD2Q9UKL4 321 aa12.04□□□□□ -0.48
RPE-209ENST00000438191 USP34Q70CQ2 3546 aa12.04□□□□□ -0.48
RPE-209ENST00000438191 WDFY4Q6ZS81 3184 aa12.04□□□□□ -0.48
RPE-209ENST00000438191 SPEF2Q9C093 1822 aa12.03□□□□□ -0.48
RPE-209ENST00000438191 TCP10L2B9ZVM9 353 aa12.03□□□□□ -0.48
RPE-209ENST00000438191 TLL1O43897 1013 aa12.03□□□□□ -0.48
RPE-209ENST00000438191 PRKAR2AP13861 404 aaKnown RBP12.03□□□□□ -0.48
RPE-209ENST00000438191 RBM5P52756 815 aaKnown RBP eCLIP12.03□□□□□ -0.48
RPE-209ENST00000438191 EPHB4P54760 987 aa12.03□□□□□ -0.48
RPE-209ENST00000438191 PNISRQ8TF01 805 aaKnown RBP12.03□□□□□ -0.48
RPE-209ENST00000438191 UIMC1Q96RL1 719 aa12.03□□□□□ -0.48
RPE-209ENST00000438191 RSPH6AQ9H0K4 717 aa12.03□□□□□ -0.48
RPE-209ENST00000438191 TDRD3Q9H7E2 651 aaKnown RBP12.03□□□□□ -0.48
RPE-209ENST00000438191 BAHCC1Q9P281 2608 aa12.02□□□□□ -0.49
RPE-209ENST00000438191 ERC2O15083 957 aa12.02□□□□□ -0.49
RPE-209ENST00000438191 KLRK1P26718 216 aa12.02□□□□□ -0.49
RPE-209ENST00000438191 CCDC152Q4G0S7 254 aa12.02□□□□□ -0.49
RPE-209ENST00000438191 CD320Q9NPF0 282 aa12.02□□□□□ -0.49
RPE-209ENST00000438191 MINPP1Q9UNW1 487 aa12.02□□□□□ -0.49
RPE-209ENST00000438191 RLFQ13129 1914 aa12.01□□□□□ -0.49
RPE-209ENST00000438191 ATP5J2-PTCD1G3V325 749 aa12.01□□□□□ -0.49
RPE-209ENST00000438191 EIF2S2P20042 333 aaKnown RBP12.01□□□□□ -0.49
RPE-209ENST00000438191 TNNI2P48788 182 aa12.01□□□□□ -0.49
RPE-209ENST00000438191 COL26A1Q96A83 441 aa12.01□□□□□ -0.49
RPE-209ENST00000438191 CD209Q9NNX6 404 aa12.01□□□□□ -0.49
RPE-209ENST00000438191 PRDM5Q9NQX1 630 aaPredicted RBP12.01□□□□□ -0.49
RPE-209ENST00000438191 ATP11BQ9Y2G3 1177 aa12.01□□□□□ -0.49
RPE-209ENST00000438191 PKD1L2Q7Z442 2459 aa12.01□□□□□ -0.49
RPE-209ENST00000438191 SPTBN4Q9H254 2564 aa12□□□□□ -0.49
RPE-209ENST00000438191 ITGB8P26012 769 aa12□□□□□ -0.49
RPE-209ENST00000438191 INPP5BP32019 993 aa12□□□□□ -0.49
RPE-209ENST00000438191 FKBP1AP62942 108 aaKnown RBP12□□□□□ -0.49
RPE-209ENST00000438191 ERMP1Q7Z2K6 904 aa12□□□□□ -0.49
RPE-209ENST00000438191 CCDC85AQ96PX6 553 aaPredicted RBP12□□□□□ -0.49
RPE-209ENST00000438191 PDLIM7Q9NR12 457 aa12□□□□□ -0.49
RPE-209ENST00000438191 LEMD3Q9Y2U8 911 aa12□□□□□ -0.49
RPE-209ENST00000438191 ZNF318Q5VUA4 2279 aa12□□□□□ -0.49
RPE-209ENST00000438191 CCND3P30281 292 aaPredicted RBP11.99□□□□□ -0.49
RPE-209ENST00000438191 PBX2P40425 430 aa11.99□□□□□ -0.49
RPE-209ENST00000438191 SH3RF1Q7Z6J0 888 aa11.99□□□□□ -0.49
RPE-209ENST00000438191 PBX4Q9BYU1 374 aa11.99□□□□□ -0.49
RPE-209ENST00000438191 TRIM43BA6NCK2 446 aa11.98□□□□□ -0.49
RPE-209ENST00000438191 CXCL11O14625 94 aa11.98□□□□□ -0.49
RPE-209ENST00000438191 RGS20O76081 388 aa11.98□□□□□ -0.49
RPE-209ENST00000438191 CACNB2Q08289 660 aaPredicted RBP11.98□□□□□ -0.49
RPE-209ENST00000438191 AMER1Q5JTC6 1135 aaPredicted RBP11.98□□□□□ -0.49
RPE-209ENST00000438191 ANKRD13CQ8N6S4 541 aa11.98□□□□□ -0.49
RPE-209ENST00000438191 TRIM43Q96BQ3 446 aaPredicted RBP11.98□□□□□ -0.49
RPE-209ENST00000438191 BSDC1Q9NW68 430 aaPredicted RBP11.98□□□□□ -0.49
RPE-209ENST00000438191 SLC45A1Q9Y2W3 748 aa11.98□□□□□ -0.49
RPE-209ENST00000438191 CHD9Q3L8U1 2897 aa11.98□□□□□ -0.49
RPE-209ENST00000438191 RPAP1Q9BWH6 1393 aaPredicted RBP11.97□□□□□ -0.49
RPE-209ENST00000438191 TRIM28Q13263 835 aaKnown RBP11.97□□□□□ -0.49
RPE-209ENST00000438191 CSPP1Q1MSJ5 1256 aa11.97□□□□□ -0.49
RPE-209ENST00000438191 FAM110CQ1W6H9 321 aa11.97□□□□□ -0.49
RPE-209ENST00000438191 MICALL1Q8N3F8 863 aa11.97□□□□□ -0.49
RPE-209ENST00000438191 SMCR8Q8TEV9 937 aaPredicted RBP11.97□□□□□ -0.49
RPE-209ENST00000438191 KNSTRNQ9Y448 316 aa11.97□□□□□ -0.49
RPE-209ENST00000438191 KMT2BQ9UMN6 2715 aaPredicted RBP11.97□□□□□ -0.49
RPE-209ENST00000438191 PTPRFP10586 1907 aa11.96□□□□□ -0.49
RPE-209ENST00000438191 PDE8AO60658 829 aa11.96□□□□□ -0.49
RPE-209ENST00000438191 CYP2B6P20813 491 aa11.96□□□□□ -0.49
RPE-209ENST00000438191 SKIV2LQ15477 1246 aaKnown RBP11.96□□□□□ -0.49
RPE-209ENST00000438191 SLC39A5Q6ZMH5 540 aa11.96□□□□□ -0.49
RPE-209ENST00000438191 FASTKD5Q7L8L6 764 aaKnown RBP11.96□□□□□ -0.49
RPE-209ENST00000438191 DZIP1LQ8IYY4 767 aaKnown RBP11.96□□□□□ -0.49
RPE-209ENST00000438191 PLBD2Q8NHP8 589 aa11.96□□□□□ -0.49
RPE-209ENST00000438191 HERVK_113Q902F9 699 aa11.96□□□□□ -0.49
RPE-209ENST00000438191 HOOK2Q96ED9 719 aa11.96□□□□□ -0.49
RPE-209ENST00000438191 ZNF341Q9BYN7 854 aa11.96□□□□□ -0.49
RPE-209ENST00000438191 A0A0G2JLL6 359 aaPredicted RBP11.95□□□□□ -0.5
RPE-209ENST00000438191 GRXCR1A8MXD5 290 aa11.95□□□□□ -0.5
RPE-209ENST00000438191 HSP90B1P14625 803 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms