RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 KANSL2Q9H9L4 492 aa8.48□□□□□ -1.05
SPEN-202ENST00000438066 KCNH4Q9UQ05 1017 aa8.48□□□□□ -1.05
SPEN-202ENST00000438066 UHRF1BP1Q6BDS2 1440 aa8.47□□□□□ -1.05
SPEN-202ENST00000438066 METTL12A8MUP2 240 aa8.47□□□□□ -1.05
SPEN-202ENST00000438066 TFE3P19532 575 aaPredicted RBP8.47□□□□□ -1.05
SPEN-202ENST00000438066 LMNB2Q03252 620 aa8.47□□□□□ -1.05
SPEN-202ENST00000438066 CCINQ13939 588 aa8.47□□□□□ -1.05
SPEN-202ENST00000438066 SEZ6Q53EL9 994 aa8.47□□□□□ -1.05
SPEN-202ENST00000438066 PGBD3Q8N328 593 aa8.47□□□□□ -1.05
SPEN-202ENST00000438066 CELF2-AS1Q8N7Q2 184 aa8.47□□□□□ -1.05
SPEN-202ENST00000438066 SH3TC2Q8TF17 1288 aa8.47□□□□□ -1.05
SPEN-202ENST00000438066 CEP44Q9C0F1 390 aa8.47□□□□□ -1.05
SPEN-202ENST00000438066 ZFATQ9P243 1243 aa8.47□□□□□ -1.05
SPEN-202ENST00000438066 SPHKAPQ2M3C7 1700 aa8.47□□□□□ -1.05
SPEN-202ENST00000438066 DIP2BQ9P265 1576 aa8.47□□□□□ -1.05
SPEN-202ENST00000438066 FIGNL2A6NMB9 653 aa8.46□□□□□ -1.05
SPEN-202ENST00000438066 ENC1O14682 589 aa8.46□□□□□ -1.05
SPEN-202ENST00000438066 TLR3O15455 904 aaKnown RBP8.46□□□□□ -1.05
SPEN-202ENST00000438066 SFSWAPQ12872 951 aaKnown RBP8.46□□□□□ -1.05
SPEN-202ENST00000438066 COL13A1Q5TAT6 717 aaPredicted RBP8.46□□□□□ -1.05
SPEN-202ENST00000438066 CYB5RLQ6IPT4 315 aa8.46□□□□□ -1.05
SPEN-202ENST00000438066 FAM169BQ8N8A8 192 aa8.46□□□□□ -1.05
SPEN-202ENST00000438066 GSX2Q9BZM3 304 aa8.46□□□□□ -1.05
SPEN-202ENST00000438066 ST7Q9NRC1 585 aa8.46□□□□□ -1.05
SPEN-202ENST00000438066 FANCLQ9NW38 375 aa8.46□□□□□ -1.05
SPEN-202ENST00000438066 ABCA6Q8N139 1617 aa8.46□□□□□ -1.05
SPEN-202ENST00000438066 FRMPD1Q5SYB0 1578 aa8.46□□□□□ -1.06
SPEN-202ENST00000438066 MLH3Q9UHC1 1453 aa8.46□□□□□ -1.06
SPEN-202ENST00000438066 GRIN2CQ14957 1233 aa8.46□□□□□ -1.06
SPEN-202ENST00000438066 SPRED3Q2MJR0 410 aa8.46□□□□□ -1.06
SPEN-202ENST00000438066 NBPF8Q3BBV2 869 aa8.46□□□□□ -1.06
SPEN-202ENST00000438066 FBXW10Q5XX13 1052 aa8.46□□□□□ -1.06
SPEN-202ENST00000438066 FAM196AQ6ZSG2 479 aa8.46□□□□□ -1.06
SPEN-202ENST00000438066 GAS2L1Q99501 681 aaPredicted RBP8.46□□□□□ -1.06
SPEN-202ENST00000438066 DNAJC7Q99615 494 aa8.46□□□□□ -1.06
SPEN-202ENST00000438066 KLHL42Q9P2K6 505 aa8.46□□□□□ -1.06
SPEN-202ENST00000438066 TRPM2O94759 1503 aa8.45□□□□□ -1.06
SPEN-202ENST00000438066 RALGAPBQ86X10 1494 aa8.45□□□□□ -1.06
SPEN-202ENST00000438066 SPATA31E1Q6ZUB1 1445 aa8.45□□□□□ -1.06
SPEN-202ENST00000438066 CEP152O94986 1710 aa8.45□□□□□ -1.06
SPEN-202ENST00000438066 TTLL8A6PVC2 850 aa8.45□□□□□ -1.06
SPEN-202ENST00000438066 CDC45O75419 566 aa8.45□□□□□ -1.06
SPEN-202ENST00000438066 PAGE1O75459 146 aa8.45□□□□□ -1.06
SPEN-202ENST00000438066 KCNQ4P56696 695 aa8.45□□□□□ -1.06
SPEN-202ENST00000438066 PLEKHG4Q58EX7 1191 aa8.45□□□□□ -1.06
SPEN-202ENST00000438066 SAMD5Q5TGI4 173 aa8.45□□□□□ -1.06
SPEN-202ENST00000438066 AGMOQ6ZNB7 445 aa8.45□□□□□ -1.06
SPEN-202ENST00000438066 NLRP8Q86W28 1048 aa8.45□□□□□ -1.06
SPEN-202ENST00000438066 SLITRK4Q8IW52 837 aa8.45□□□□□ -1.06
SPEN-202ENST00000438066 FBXO27Q8NI29 283 aa8.45□□□□□ -1.06
SPEN-202ENST00000438066 NECAB3Q96P71 396 aaPredicted RBP8.45□□□□□ -1.06
SPEN-202ENST00000438066 HHIPQ96QV1 700 aa8.45□□□□□ -1.06
SPEN-202ENST00000438066 SPC25Q9HBM1 224 aa8.45□□□□□ -1.06
SPEN-202ENST00000438066 PCDH12Q9NPG4 1184 aa8.45□□□□□ -1.06
SPEN-202ENST00000438066 CCDC144AA2RUR9 1427 aa8.45□□□□□ -1.06
SPEN-202ENST00000438066 PPRC1Q5VV67 1664 aaKnown RBP8.44□□□□□ -1.06
SPEN-202ENST00000438066 DHX29Q7Z478 1369 aaKnown RBP8.44□□□□□ -1.06
SPEN-202ENST00000438066 DNAJC6O75061 913 aa8.44□□□□□ -1.06
SPEN-202ENST00000438066 MCM4P33991 863 aa8.44□□□□□ -1.06
SPEN-202ENST00000438066 TNNI3KQ59H18 835 aa8.44□□□□□ -1.06
SPEN-202ENST00000438066 BNC2Q6ZN30 1099 aaPredicted RBP8.44□□□□□ -1.06
SPEN-202ENST00000438066 LRP10Q7Z4F1 713 aa8.44□□□□□ -1.06
SPEN-202ENST00000438066 LILRB2Q8N423 598 aa8.44□□□□□ -1.06
SPEN-202ENST00000438066 PNMA5Q96PV4 448 aa8.44□□□□□ -1.06
SPEN-202ENST00000438066 BRINP2Q9C0B6 783 aa8.44□□□□□ -1.06
SPEN-202ENST00000438066 ZFYVE1Q9HBF4 777 aa8.44□□□□□ -1.06
SPEN-202ENST00000438066 SEC31BQ9NQW1 1179 aa8.44□□□□□ -1.06
SPEN-202ENST00000438066 TRPM1Q7Z4N2 1603 aa8.44□□□□□ -1.06
SPEN-202ENST00000438066 EFCAB6Q5THR3 1501 aa8.44□□□□□ -1.06
SPEN-202ENST00000438066 F13A1P00488 732 aa8.43□□□□□ -1.06
SPEN-202ENST00000438066 F11P03951 625 aa8.43□□□□□ -1.06
SPEN-202ENST00000438066 PSAPP07602 524 aa8.43□□□□□ -1.06
SPEN-202ENST00000438066 NFKB1P19838 968 aa8.43□□□□□ -1.06
SPEN-202ENST00000438066 TRIM42Q8IWZ5 723 aa8.43□□□□□ -1.06
SPEN-202ENST00000438066 DZANK1Q9NVP4 752 aa8.43□□□□□ -1.06
SPEN-202ENST00000438066 LMTK2Q8IWU2 1503 aa8.43□□□□□ -1.06
SPEN-202ENST00000438066 A2MP01023 1474 aa8.43□□□□□ -1.06
SPEN-202ENST00000438066 DCDC2BA2VCK2 349 aa8.43□□□□□ -1.06
SPEN-202ENST00000438066 TRIM37O94972 964 aa8.43□□□□□ -1.06
SPEN-202ENST00000438066 KIF4AO95239 1232 aa8.43□□□□□ -1.06
SPEN-202ENST00000438066 LMNB1P20700 586 aa8.43□□□□□ -1.06
SPEN-202ENST00000438066 ITPKAP23677 461 aa8.43□□□□□ -1.06
SPEN-202ENST00000438066 EIF6P56537 245 aaKnown RBP8.43□□□□□ -1.06
SPEN-202ENST00000438066 HYAL2Q12891 473 aa8.43□□□□□ -1.06
SPEN-202ENST00000438066 EFHC2Q5JST6 749 aa8.43□□□□□ -1.06
SPEN-202ENST00000438066 MRPL14Q6P1L8 145 aaKnown RBP8.43□□□□□ -1.06
SPEN-202ENST00000438066 ASAP3Q8TDY4 903 aa8.43□□□□□ -1.06
SPEN-202ENST00000438066 JARID2Q92833 1246 aaPredicted RBP8.43□□□□□ -1.06
SPEN-202ENST00000438066 PLD4Q96BZ4 506 aa8.43□□□□□ -1.06
SPEN-202ENST00000438066 NSUN5Q96P11 429 aaKnown RBP8.43□□□□□ -1.06
SPEN-202ENST00000438066 FERD3LQ96RJ6 166 aa8.43□□□□□ -1.06
SPEN-202ENST00000438066 SLKQ9H2G2 1235 aaPredicted RBP8.43□□□□□ -1.06
SPEN-202ENST00000438066 METTL14Q9HCE5 456 aaKnown RBP8.43□□□□□ -1.06
SPEN-202ENST00000438066 GPN3Q9UHW5 284 aaPredicted RBP8.43□□□□□ -1.06
SPEN-202ENST00000438066 MSRB2Q9Y3D2 182 aa8.43□□□□□ -1.06
SPEN-202ENST00000438066 PTPRTO14522 1441 aa8.43□□□□□ -1.06
SPEN-202ENST00000438066 DIP2CQ9Y2E4 1556 aa8.42□□□□□ -1.06
SPEN-202ENST00000438066 LAMC1P11047 1609 aa8.42□□□□□ -1.06
SPEN-202ENST00000438066 CLTCL1P53675 1640 aa8.42□□□□□ -1.06
SPEN-202ENST00000438066 ESYT3A0FGR9 886 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms