RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 ITGB5P18084 799 aa6.72□□□□□ -1.33
HMGB1P31-201ENST00000437242 HNRNPUQ00839 825 aaKnown RBP eCLIP6.72□□□□□ -1.33
HMGB1P31-201ENST00000437242 PTPN12Q05209 780 aaKnown RBP6.72□□□□□ -1.33
HMGB1P31-201ENST00000437242 CYP27C1Q4G0S4 372 aa6.72□□□□□ -1.33
HMGB1P31-201ENST00000437242 SEZ6L2Q6UXD5 910 aa6.72□□□□□ -1.33
HMGB1P31-201ENST00000437242 C1orf115Q9H7X2 142 aa6.72□□□□□ -1.33
HMGB1P31-201ENST00000437242 PIDD1Q9HB75 910 aa6.72□□□□□ -1.33
HMGB1P31-201ENST00000437242 ABCB6Q9NP58 842 aa6.72□□□□□ -1.33
HMGB1P31-201ENST00000437242 C1GALT1Q9NS00 363 aa6.72□□□□□ -1.33
HMGB1P31-201ENST00000437242 SLC5A6Q9Y289 635 aa6.72□□□□□ -1.33
HMGB1P31-201ENST00000437242 SYNGAP1Q96PV0 1343 aa6.72□□□□□ -1.33
HMGB1P31-201ENST00000437242 GADD45BO75293 160 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P31-201ENST00000437242 FZD5Q13467 585 aa6.71□□□□□ -1.34
HMGB1P31-201ENST00000437242 COL19A1Q14993 1142 aa6.71□□□□□ -1.34
HMGB1P31-201ENST00000437242 PRPF40BQ6NWY9 871 aaKnown RBP6.71□□□□□ -1.34
HMGB1P31-201ENST00000437242 OGFOD3Q6PK18 319 aa6.71□□□□□ -1.34
HMGB1P31-201ENST00000437242 STK11IPQ8N1F8 1099 aa6.71□□□□□ -1.34
HMGB1P31-201ENST00000437242 FAM129BQ96TA1 746 aa6.71□□□□□ -1.34
HMGB1P31-201ENST00000437242 PPP1R9AQ9ULJ8 1098 aa6.71□□□□□ -1.34
HMGB1P31-201ENST00000437242 TMPRSS2O15393 492 aa6.7□□□□□ -1.34
HMGB1P31-201ENST00000437242 LIG1P18858 919 aa6.7□□□□□ -1.34
HMGB1P31-201ENST00000437242 ARHGAP4P98171 946 aa6.7□□□□□ -1.34
HMGB1P31-201ENST00000437242 PLCL1Q15111 1095 aa6.7□□□□□ -1.34
HMGB1P31-201ENST00000437242 RPS26P11Q5JNZ5 115 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P31-201ENST00000437242 BCL7CQ8WUZ0 217 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P31-201ENST00000437242 ATXN3LQ9H3M9 355 aa6.7□□□□□ -1.34
HMGB1P31-201ENST00000437242 TRAK1Q9UPV9 953 aa6.7□□□□□ -1.34
HMGB1P31-201ENST00000437242 ECM1Q16610 540 aa6.69□□□□□ -1.34
HMGB1P31-201ENST00000437242 ZNF574Q6ZN55 896 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P31-201ENST00000437242 TMC1Q8TDI8 760 aa6.69□□□□□ -1.34
HMGB1P31-201ENST00000437242 CCDC74AQ96AQ1 378 aa6.69□□□□□ -1.34
HMGB1P31-201ENST00000437242 MISP3Q96FF7 219 aa6.69□□□□□ -1.34
HMGB1P31-201ENST00000437242 CITED4Q96RK1 184 aa6.69□□□□□ -1.34
HMGB1P31-201ENST00000437242 ZC3H12CQ9C0D7 883 aaKnown RBP6.69□□□□□ -1.34
HMGB1P31-201ENST00000437242 DNAJC25Q9H1X3 360 aa6.69□□□□□ -1.34
HMGB1P31-201ENST00000437242 CCDC86Q9H6F5 360 aaKnown RBP6.69□□□□□ -1.34
HMGB1P31-201ENST00000437242 GTF3C3Q9Y5Q9 886 aa6.69□□□□□ -1.34
HMGB1P31-201ENST00000437242 TMEM238LA0A1B0GVL6 79 aa6.68□□□□□ -1.34
HMGB1P31-201ENST00000437242 EIF1AYO14602 144 aaKnown RBP6.68□□□□□ -1.34
HMGB1P31-201ENST00000437242 SLFN14P0C7P3 912 aa6.68□□□□□ -1.34
HMGB1P31-201ENST00000437242 FAM87AP0C7U9 286 aa6.68□□□□□ -1.34
HMGB1P31-201ENST00000437242 ZNF157P51786 506 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P31-201ENST00000437242 ID3Q02535 119 aa6.68□□□□□ -1.34
HMGB1P31-201ENST00000437242 CDK5R2Q13319 367 aa6.68□□□□□ -1.34
HMGB1P31-201ENST00000437242 POU5F2Q8N7G0 328 aa6.68□□□□□ -1.34
HMGB1P31-201ENST00000437242 CRIM1Q9NZV1 1036 aa6.68□□□□□ -1.34
HMGB1P31-201ENST00000437242 BIN1O00499 593 aa6.67□□□□□ -1.34
HMGB1P31-201ENST00000437242 GPR182O15218 404 aa6.67□□□□□ -1.34
HMGB1P31-201ENST00000437242 WDR89Q96FK6 387 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P31-201ENST00000437242 FANCD2OSQ96PS1 177 aa6.67□□□□□ -1.34
HMGB1P31-201ENST00000437242 NIF3L1Q9GZT8 377 aa6.67□□□□□ -1.34
HMGB1P31-201ENST00000437242 PAPLNO95428 1278 aa6.66□□□□□ -1.34
HMGB1P31-201ENST00000437242 C8AP07357 584 aa6.66□□□□□ -1.34
HMGB1P31-201ENST00000437242 GSTP1P09211 210 aaKnown RBP6.66□□□□□ -1.34
HMGB1P31-201ENST00000437242 FAAP100Q0VG06 881 aa6.66□□□□□ -1.34
HMGB1P31-201ENST00000437242 ZNF792Q3KQV3 632 aa6.66□□□□□ -1.34
HMGB1P31-201ENST00000437242 SMYD4Q8IYR2 804 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P31-201ENST00000437242 PLD6Q8N2A8 252 aaKnown RBP6.66□□□□□ -1.34
HMGB1P31-201ENST00000437242 FAM181AQ8N9Y4 354 aa6.66□□□□□ -1.34
HMGB1P31-201ENST00000437242 NETO1Q8TDF5 533 aa6.66□□□□□ -1.34
HMGB1P31-201ENST00000437242 KRT82Q9NSB4 513 aa6.66□□□□□ -1.34
HMGB1P31-201ENST00000437242 GPN3Q9UHW5 284 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P31-201ENST00000437242 ZNF862O60290 1169 aa6.65□□□□□ -1.34
HMGB1P31-201ENST00000437242 RNGTTO60942 597 aaKnown RBP6.65□□□□□ -1.34
HMGB1P31-201ENST00000437242 JAG1P78504 1218 aa6.65□□□□□ -1.34
HMGB1P31-201ENST00000437242 PPP2R3AQ06190 1150 aa6.65□□□□□ -1.34
HMGB1P31-201ENST00000437242 GRM2Q14416 872 aa6.65□□□□□ -1.34
HMGB1P31-201ENST00000437242 KIF4BQ2VIQ3 1234 aa6.65□□□□□ -1.34
HMGB1P31-201ENST00000437242 DTHD1Q6ZMT9 781 aa6.65□□□□□ -1.34
HMGB1P31-201ENST00000437242 ARHGAP27Q6ZUM4 889 aa6.65□□□□□ -1.34
HMGB1P31-201ENST00000437242 SPRED2Q7Z698 418 aa6.65□□□□□ -1.34
HMGB1P31-201ENST00000437242 WFDC3Q8IUB2 231 aa6.65□□□□□ -1.34
HMGB1P31-201ENST00000437242 FCGRTP55899 365 aa6.64□□□□□ -1.35
HMGB1P31-201ENST00000437242 BNIP3Q12983 259 aa6.64□□□□□ -1.35
HMGB1P31-201ENST00000437242 TTLL4Q14679 1199 aa6.64□□□□□ -1.35
HMGB1P31-201ENST00000437242 GLIS3Q8NEA6 775 aa6.64□□□□□ -1.35
HMGB1P31-201ENST00000437242 DMRTB1Q96MA1 342 aa6.64□□□□□ -1.35
HMGB1P31-201ENST00000437242 CSRNP1Q96S65 589 aa6.64□□□□□ -1.35
HMGB1P31-201ENST00000437242 ARID1BQ8NFD5 2236 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P31-201ENST00000437242 IGHA2P01877 340 aa6.63□□□□□ -1.35
HMGB1P31-201ENST00000437242 HCLS1P14317 486 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P31-201ENST00000437242 FUT4P22083 530 aa6.63□□□□□ -1.35
HMGB1P31-201ENST00000437242 EPS8L3Q8TE67 593 aaKnown RBP6.63□□□□□ -1.35
HMGB1P31-201ENST00000437242 KCNB2Q92953 911 aa6.63□□□□□ -1.35
HMGB1P31-201ENST00000437242 RC3H2Q9HBD1 1191 aaKnown RBP6.63□□□□□ -1.35
HMGB1P31-201ENST00000437242 DISC1Q9NRI5 854 aa6.63□□□□□ -1.35
HMGB1P31-201ENST00000437242 TMEM39AQ9NV64 488 aa6.63□□□□□ -1.35
HMGB1P31-201ENST00000437242 PCDHGC5Q9Y5F6 944 aa6.63□□□□□ -1.35
HMGB1P31-201ENST00000437242 CD8BP10966 210 aa6.62□□□□□ -1.35
HMGB1P31-201ENST00000437242 IFI16Q16666 785 aaKnown RBP6.62□□□□□ -1.35
HMGB1P31-201ENST00000437242 ALKBH8Q96BT7 664 aaKnown RBP6.62□□□□□ -1.35
HMGB1P31-201ENST00000437242 SSU72Q9NP77 194 aaKnown RBP6.62□□□□□ -1.35
HMGB1P31-201ENST00000437242 NLRP2Q9NX02 1062 aa6.62□□□□□ -1.35
HMGB1P31-201ENST00000437242 PPP4R2Q9NY27 417 aa6.62□□□□□ -1.35
HMGB1P31-201ENST00000437242 PCOLCE2Q9UKZ9 415 aa6.62□□□□□ -1.35
HMGB1P31-201ENST00000437242 LEFTY1O75610 366 aa6.61□□□□□ -1.35
HMGB1P31-201ENST00000437242 PRKCQQ04759 706 aa6.61□□□□□ -1.35
HMGB1P31-201ENST00000437242 TXNDC2Q86VQ3 553 aa6.61□□□□□ -1.35
HMGB1P31-201ENST00000437242 SULF2Q8IWU5 870 aa6.61□□□□□ -1.35
HMGB1P31-201ENST00000437242 HRASLS5Q96KN8 279 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms