RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 RRAGCQ9HB90 399 aa20.23■□□□□ 0.83
CALD1-209ENST00000436461 HACL1Q9UJ83 578 aa20.23■□□□□ 0.83
CALD1-209ENST00000436461 GPR75-ASB3A0A0A6YYF3 556 aa20.22■□□□□ 0.83
CALD1-209ENST00000436461 SPDYE2BA6NHP3 402 aa20.22■□□□□ 0.83
CALD1-209ENST00000436461 MBD4O95243 580 aa20.22■□□□□ 0.83
CALD1-209ENST00000436461 SPDYE6P0CI01 402 aa20.22■□□□□ 0.83
CALD1-209ENST00000436461 HIRAP54198 1017 aaPredicted RBP20.22■□□□□ 0.83
CALD1-209ENST00000436461 ZNF589Q86UQ0 364 aaPredicted RBP20.22■□□□□ 0.83
CALD1-209ENST00000436461 RIOK1Q9BRS2 568 aaKnown RBP20.22■□□□□ 0.83
CALD1-209ENST00000436461 NMRK2Q9NPI5 230 aa20.22■□□□□ 0.83
CALD1-209ENST00000436461 SCAF8Q9UPN6 1271 aaKnown RBP20.22■□□□□ 0.83
CALD1-209ENST00000436461 MAGEB6P1A0A0J9YX57 407 aa20.21■□□□□ 0.83
CALD1-209ENST00000436461 CLRN2A0PK11 232 aa20.21■□□□□ 0.83
CALD1-209ENST00000436461 EPHX2P34913 555 aa20.21■□□□□ 0.83
CALD1-209ENST00000436461 CACNB3P54284 484 aa20.21■□□□□ 0.83
CALD1-209ENST00000436461 SH3RF3Q8TEJ3 882 aaPredicted RBP20.21■□□□□ 0.83
CALD1-209ENST00000436461 MRIQ9BWK5 157 aa20.21■□□□□ 0.83
CALD1-209ENST00000436461 ADARB2Q9NS39 739 aaKnown RBP20.21■□□□□ 0.83
CALD1-209ENST00000436461 HIP1O00291 1037 aa20.2■□□□□ 0.82
CALD1-209ENST00000436461 GPAA1O43292 621 aa20.2■□□□□ 0.82
CALD1-209ENST00000436461 CDC42EP5Q6NZY7 148 aa20.2■□□□□ 0.82
CALD1-209ENST00000436461 AIDAQ96BJ3 306 aa20.2■□□□□ 0.82
CALD1-209ENST00000436461 ZBED3Q96IU2 234 aaPredicted RBP20.2■□□□□ 0.82
CALD1-209ENST00000436461 TAF1DQ9H5J8 278 aaPredicted RBP20.2■□□□□ 0.82
CALD1-209ENST00000436461 RHBDL3P58872 404 aa20.2■□□□□ 0.82
CALD1-209ENST00000436461 MCMDC2Q4G0Z9 681 aa20.2■□□□□ 0.82
CALD1-209ENST00000436461 MTMR14Q8NCE2 650 aa20.2■□□□□ 0.82
CALD1-209ENST00000436461 NOL10Q9BSC4 688 aaKnown RBP20.2■□□□□ 0.82
CALD1-209ENST00000436461 HELLSQ9NRZ9 838 aa20.2■□□□□ 0.82
CALD1-209ENST00000436461 USP40Q9NVE5 1235 aa20.2■□□□□ 0.82
CALD1-209ENST00000436461 POLR2AP24928 1970 aaKnown RBP20.19■□□□□ 0.82
CALD1-209ENST00000436461 PRKAB2O43741 272 aa20.19■□□□□ 0.82
CALD1-209ENST00000436461 IGSF3O75054 1194 aa20.19■□□□□ 0.82
CALD1-209ENST00000436461 EAPPQ56P03 285 aaPredicted RBP20.19■□□□□ 0.82
CALD1-209ENST00000436461 IQCA1LA6NCM1 817 aa20.18■□□□□ 0.82
CALD1-209ENST00000436461 BAG3O95817 575 aa20.18■□□□□ 0.82
CALD1-209ENST00000436461 POTEIP0CG38 1075 aa20.18■□□□□ 0.82
CALD1-209ENST00000436461 POTEJP0CG39 1038 aa20.18■□□□□ 0.82
CALD1-209ENST00000436461 PPP4CP60510 307 aa20.18■□□□□ 0.82
CALD1-209ENST00000436461 VPS53Q5VIR6 699 aa20.18■□□□□ 0.82
CALD1-209ENST00000436461 SDR42E1Q8WUS8 393 aa20.18■□□□□ 0.82
CALD1-209ENST00000436461 FOCADQ5VW36 1801 aa20.18■□□□□ 0.82
CALD1-209ENST00000436461 BAZ2AQ9UIF9 1905 aaKnown RBP20.17■□□□□ 0.82
CALD1-209ENST00000436461 NFIAQ12857 509 aa20.17■□□□□ 0.82
CALD1-209ENST00000436461 STRBPQ96SI9 672 aaKnown RBP20.17■□□□□ 0.82
CALD1-209ENST00000436461 ESYT1Q9BSJ8 1104 aa20.17■□□□□ 0.82
CALD1-209ENST00000436461 VEZTQ9HBM0 779 aa20.17■□□□□ 0.82
CALD1-209ENST00000436461 MMP14P50281 582 aa20.16■□□□□ 0.82
CALD1-209ENST00000436461 TMED8Q6PL24 325 aaPredicted RBP20.16■□□□□ 0.82
CALD1-209ENST00000436461 TICAM2Q86XR7 235 aa20.16■□□□□ 0.82
CALD1-209ENST00000436461 TEX11Q8IYF3 940 aa20.16■□□□□ 0.82
CALD1-209ENST00000436461 ZNF70Q9UC06 446 aaPredicted RBP20.16■□□□□ 0.82
CALD1-209ENST00000436461 CCDC171Q6TFL3 1326 aa20.16■□□□□ 0.82
CALD1-209ENST00000436461 SGSM2O43147 1006 aa20.16■□□□□ 0.82
CALD1-209ENST00000436461 WDHD1O75717 1129 aaPredicted RBP20.16■□□□□ 0.82
CALD1-209ENST00000436461 VEGFAP15692 232 aaPredicted RBP20.16■□□□□ 0.82
CALD1-209ENST00000436461 YY1P25490 414 aa20.16■□□□□ 0.82
CALD1-209ENST00000436461 PICALMQ13492 652 aa20.16■□□□□ 0.82
CALD1-209ENST00000436461 SPDYE2Q495Y8 402 aa20.16■□□□□ 0.82
CALD1-209ENST00000436461 C8orf34Q49A92 452 aa20.16■□□□□ 0.82
CALD1-209ENST00000436461 ANGEL2Q5VTE6 544 aaKnown RBP20.16■□□□□ 0.82
CALD1-209ENST00000436461 CASC1Q6TDU7 716 aa20.16■□□□□ 0.82
CALD1-209ENST00000436461 TGFBRAP1Q8WUH2 860 aa20.16■□□□□ 0.82
CALD1-209ENST00000436461 DDX4Q9NQI0 724 aaKnown RBP20.16■□□□□ 0.82
CALD1-209ENST00000436461 GGA3Q9NZ52 723 aa20.16■□□□□ 0.82
CALD1-209ENST00000436461 SLC4A4Q9Y6R1 1079 aa20.16■□□□□ 0.82
CALD1-209ENST00000436461 NAV1Q8NEY1 1877 aa20.15■□□□□ 0.82
CALD1-209ENST00000436461 TCP10L2B9ZVM9 353 aa20.15■□□□□ 0.82
CALD1-209ENST00000436461 MYO1BO43795 1136 aa20.15■□□□□ 0.82
CALD1-209ENST00000436461 RUFY2Q8WXA3 655 aa20.15■□□□□ 0.82
CALD1-209ENST00000436461 FOXP2O15409 715 aa20.14■□□□□ 0.81
CALD1-209ENST00000436461 TCP10Q12799 353 aa20.14■□□□□ 0.81
CALD1-209ENST00000436461 USP50Q70EL3 339 aaPredicted RBP20.14■□□□□ 0.81
CALD1-209ENST00000436461 MAPKAPK5Q8IW41 473 aa20.14■□□□□ 0.81
CALD1-209ENST00000436461 RAD50Q92878 1312 aa20.14■□□□□ 0.81
CALD1-209ENST00000436461 PLCG2P16885 1265 aa20.13■□□□□ 0.81
CALD1-209ENST00000436461 USP5P45974 858 aa20.13■□□□□ 0.81
CALD1-209ENST00000436461 SLC4A8Q2Y0W8 1093 aa20.13■□□□□ 0.81
CALD1-209ENST00000436461 ZFPM1Q8IX07 1006 aa20.13■□□□□ 0.81
CALD1-209ENST00000436461 CRNKL1Q9BZJ0 848 aaKnown RBP20.13■□□□□ 0.81
CALD1-209ENST00000436461 GPBP1L1Q9HC44 474 aaPredicted RBP20.13■□□□□ 0.81
CALD1-209ENST00000436461 FAM198AQ9UFP1 575 aa20.13■□□□□ 0.81
CALD1-209ENST00000436461 MYH1P12882 1939 aa20.13■□□□□ 0.81
CALD1-209ENST00000436461 EPB41L4AQ9HCS5 686 aaPredicted RBP20.13■□□□□ 0.81
CALD1-209ENST00000436461 FLT1P17948 1338 aa20.12■□□□□ 0.81
CALD1-209ENST00000436461 GSG1L2A8MUP6 293 aa20.12■□□□□ 0.81
CALD1-209ENST00000436461 APPP05067 770 aa20.12■□□□□ 0.81
CALD1-209ENST00000436461 HSPD1P10809 573 aaKnown RBP20.12■□□□□ 0.81
CALD1-209ENST00000436461 PTH1RQ03431 593 aa20.12■□□□□ 0.81
CALD1-209ENST00000436461 DLK2Q6UY11 383 aa20.12■□□□□ 0.81
CALD1-209ENST00000436461 TMOD2Q9NZR1 351 aa20.12■□□□□ 0.81
CALD1-209ENST00000436461 CLEC11AQ9Y240 323 aa20.12■□□□□ 0.81
CALD1-209ENST00000436461 DDX60LQ5H9U9 1706 aaKnown RBP20.11■□□□□ 0.81
CALD1-209ENST00000436461 SEC24BO95487 1268 aa20.11■□□□□ 0.81
CALD1-209ENST00000436461 EVX2Q03828 476 aa20.11■□□□□ 0.81
CALD1-209ENST00000436461 PNMA8AQ86V59 439 aaPredicted RBP20.11■□□□□ 0.81
CALD1-209ENST00000436461 DCP1AQ9NPI6 582 aaPredicted RBP20.11■□□□□ 0.81
CALD1-209ENST00000436461 ANO2Q9NQ90 1003 aa20.11■□□□□ 0.81
CALD1-209ENST00000436461 SAP30BPQ9UHR5 308 aaKnown RBP20.11■□□□□ 0.81
CALD1-209ENST00000436461 CNTNAP1P78357 1384 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms