RNA–Protein interactions for RNA: ENST00000435495.6

PTPN12-206, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2 BASIC

Gene PTPN12, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-206ENST00000435495 GALNT12Q8IXK2 581 aa5.44□□□□□ -1.54
PTPN12-206ENST00000435495 JARID2Q92833 1246 aaPredicted RBP5.44□□□□□ -1.54
PTPN12-206ENST00000435495 ZKSCAN3Q9BRR0 538 aa5.44□□□□□ -1.54
PTPN12-206ENST00000435495 SRRTQ9BXP5 876 aaKnown RBP5.44□□□□□ -1.54
PTPN12-206ENST00000435495 PTPRHQ9HD43 1115 aa5.44□□□□□ -1.54
PTPN12-206ENST00000435495 SIRPGQ9P1W8 387 aa5.44□□□□□ -1.54
PTPN12-206ENST00000435495 ANAPC4Q9UJX5 808 aa5.44□□□□□ -1.54
PTPN12-206ENST00000435495 GRIN3BO60391 1043 aa5.44□□□□□ -1.54
PTPN12-206ENST00000435495 GREM1O60565 184 aa5.44□□□□□ -1.54
PTPN12-206ENST00000435495 MASP1P48740 699 aa5.44□□□□□ -1.54
PTPN12-206ENST00000435495 FOXC1Q12948 553 aa5.44□□□□□ -1.54
PTPN12-206ENST00000435495 NFE2Q16621 373 aaPredicted RBP5.44□□□□□ -1.54
PTPN12-206ENST00000435495 BRDTQ58F21 947 aaPredicted RBP5.44□□□□□ -1.54
PTPN12-206ENST00000435495 MRM1Q6IN84 353 aaKnown RBP5.44□□□□□ -1.54
PTPN12-206ENST00000435495 PODNQ7Z5L7 613 aa5.44□□□□□ -1.54
PTPN12-206ENST00000435495 KIAA0907Q7Z7F0 614 aaPredicted RBP5.44□□□□□ -1.54
PTPN12-206ENST00000435495 RELL1Q8IUW5 271 aa5.44□□□□□ -1.54
PTPN12-206ENST00000435495 MSRB2Q9Y3D2 182 aa5.44□□□□□ -1.54
PTPN12-206ENST00000435495 IRS4O14654 1257 aaPredicted RBP5.43□□□□□ -1.54
PTPN12-206ENST00000435495 GTF2E1P29083 439 aaPredicted RBP5.43□□□□□ -1.54
PTPN12-206ENST00000435495 FAAP100Q0VG06 881 aa5.43□□□□□ -1.54
PTPN12-206ENST00000435495 INO80DQ53TQ3 878 aaPredicted RBP5.43□□□□□ -1.54
PTPN12-206ENST00000435495 NBPF6Q5VWK0 638 aa5.43□□□□□ -1.54
PTPN12-206ENST00000435495 ADAMTSL4Q6UY14 1074 aa5.43□□□□□ -1.54
PTPN12-206ENST00000435495 CHPFQ8IZ52 775 aa5.43□□□□□ -1.54
PTPN12-206ENST00000435495 NBPF4Q96M43 638 aa5.43□□□□□ -1.54
PTPN12-206ENST00000435495 NSUN5Q96P11 429 aaKnown RBP5.43□□□□□ -1.54
PTPN12-206ENST00000435495 RSRP1Q9BUV0 290 aa5.43□□□□□ -1.54
PTPN12-206ENST00000435495 SLKQ9H2G2 1235 aaPredicted RBP5.43□□□□□ -1.54
PTPN12-206ENST00000435495 SUPT16HQ9Y5B9 1047 aaKnown RBP5.43□□□□□ -1.54
PTPN12-206ENST00000435495 HIP1RO75146 1068 aa5.43□□□□□ -1.54
PTPN12-206ENST00000435495 RNASEH2AO75792 299 aaKnown RBP5.43□□□□□ -1.54
PTPN12-206ENST00000435495 POU3F3P20264 500 aaPredicted RBP5.43□□□□□ -1.54
PTPN12-206ENST00000435495 VEGFBP49765 207 aa5.43□□□□□ -1.54
PTPN12-206ENST00000435495 TMEM95Q3KNT9 176 aa5.43□□□□□ -1.54
PTPN12-206ENST00000435495 C6orf15Q6UXA7 325 aaPredicted RBP5.43□□□□□ -1.54
PTPN12-206ENST00000435495 MSL3Q8N5Y2 521 aaKnown RBP5.43□□□□□ -1.54
PTPN12-206ENST00000435495 APPBP2Q92624 585 aa5.43□□□□□ -1.54
PTPN12-206ENST00000435495 TCF12Q99081 682 aa5.43□□□□□ -1.54
PTPN12-206ENST00000435495 IFT122Q9HBG6 1241 aa5.43□□□□□ -1.54
PTPN12-206ENST00000435495 ZFATQ9P243 1243 aa5.43□□□□□ -1.54
PTPN12-206ENST00000435495 R3HCC1Q9Y3T6 440 aaKnown RBP5.43□□□□□ -1.54
PTPN12-206ENST00000435495 MMP20O60882 483 aa5.42□□□□□ -1.54
PTPN12-206ENST00000435495 GJB6O95452 261 aa5.42□□□□□ -1.54
PTPN12-206ENST00000435495 ASMTLO95671 621 aa5.42□□□□□ -1.54
PTPN12-206ENST00000435495 TGFB3P10600 412 aa5.42□□□□□ -1.54
PTPN12-206ENST00000435495 TIMP2P16035 220 aa5.42□□□□□ -1.54
PTPN12-206ENST00000435495 CDK8P49336 464 aa5.42□□□□□ -1.54
PTPN12-206ENST00000435495 MMP14P50281 582 aa5.42□□□□□ -1.54
PTPN12-206ENST00000435495 EXOSC10Q01780 885 aaKnown RBP5.42□□□□□ -1.54
PTPN12-206ENST00000435495 MTERF2Q49AM1 385 aa5.42□□□□□ -1.54
PTPN12-206ENST00000435495 CCDC93Q567U6 631 aa5.42□□□□□ -1.54
PTPN12-206ENST00000435495 TTBK2Q6IQ55 1244 aa5.42□□□□□ -1.54
PTPN12-206ENST00000435495 XKR5Q6UX68 686 aa5.42□□□□□ -1.54
PTPN12-206ENST00000435495 GRIP2Q9C0E4 1043 aa5.42□□□□□ -1.54
PTPN12-206ENST00000435495 SRCIN1Q9C0H9 1055 aa5.42□□□□□ -1.54
PTPN12-206ENST00000435495 MRPS23Q9Y3D9 190 aaKnown RBP5.42□□□□□ -1.54
PTPN12-206ENST00000435495 MYL1P05976 194 aa5.42□□□□□ -1.54
PTPN12-206ENST00000435495 SRGNP10124 158 aa5.42□□□□□ -1.54
PTPN12-206ENST00000435495 TRAPPC10P48553 1259 aa5.42□□□□□ -1.54
PTPN12-206ENST00000435495 ANKRD24Q8TF21 1146 aa5.42□□□□□ -1.54
PTPN12-206ENST00000435495 NT5C1AQ9BXI3 368 aa5.42□□□□□ -1.54
PTPN12-206ENST00000435495 RUBCNLQ9H714 662 aa5.42□□□□□ -1.54
PTPN12-206ENST00000435495 POLMQ9NP87 494 aaPredicted RBP5.42□□□□□ -1.54
PTPN12-206ENST00000435495 TMEM260Q9NX78 707 aa5.42□□□□□ -1.54
PTPN12-206ENST00000435495 DIS3Q9Y2L1 958 aaKnown RBP5.42□□□□□ -1.54
PTPN12-206ENST00000435495 PTCH2Q9Y6C5 1203 aa5.42□□□□□ -1.54
PTPN12-206ENST00000435495 PDPK1O15530 556 aa5.41□□□□□ -1.54
PTPN12-206ENST00000435495 PTPN11Q06124 597 aaPredicted RBP5.41□□□□□ -1.54
PTPN12-206ENST00000435495 PPP2R5AQ15172 486 aa5.41□□□□□ -1.54
PTPN12-206ENST00000435495 FAM196AQ6ZSG2 479 aa5.41□□□□□ -1.54
PTPN12-206ENST00000435495 NYAP1Q6ZVC0 841 aa5.41□□□□□ -1.54
PTPN12-206ENST00000435495 C14orf80Q86SX3 495 aa5.41□□□□□ -1.54
PTPN12-206ENST00000435495 MYRIPQ8NFW9 859 aa5.41□□□□□ -1.54
PTPN12-206ENST00000435495 FERD3LQ96RJ6 166 aa5.41□□□□□ -1.54
PTPN12-206ENST00000435495 BRD7Q9NPI1 651 aa5.41□□□□□ -1.54
PTPN12-206ENST00000435495 SETD1BQ9UPS6 1966 aaKnown RBP5.41□□□□□ -1.54
PTPN12-206ENST00000435495 TNFRSF10AO00220 468 aa5.41□□□□□ -1.54
PTPN12-206ENST00000435495 SCGB1D2O95969 90 aa5.41□□□□□ -1.54
PTPN12-206ENST00000435495 CT47B1P0C2W7 299 aaPredicted RBP5.41□□□□□ -1.54
PTPN12-206ENST00000435495 FAM200BP0CF97 657 aa5.41□□□□□ -1.54
PTPN12-206ENST00000435495 CLCQ05315 142 aa5.41□□□□□ -1.54
PTPN12-206ENST00000435495 ALDH1L2Q3SY69 923 aa5.41□□□□□ -1.54
PTPN12-206ENST00000435495 SUGP1Q8IWZ8 645 aaKnown RBP5.41□□□□□ -1.54
PTPN12-206ENST00000435495 ZIC5Q96T25 663 aa5.41□□□□□ -1.54
PTPN12-206ENST00000435495 LIN7BQ9HAP6 207 aa5.41□□□□□ -1.54
PTPN12-206ENST00000435495 BRMS1Q9HCU9 246 aa5.41□□□□□ -1.54
PTPN12-206ENST00000435495 PCDHB10Q9UN67 800 aa5.41□□□□□ -1.54
PTPN12-206ENST00000435495 SLC45A1Q9Y2W3 748 aa5.41□□□□□ -1.54
PTPN12-206ENST00000435495 CCDC163A0A0D9SF12 145 aa5.4□□□□□ -1.54
PTPN12-206ENST00000435495 BICDL2A1A5D9 508 aa5.4□□□□□ -1.54
PTPN12-206ENST00000435495 PRSS47A8MTI9 375 aa5.4□□□□□ -1.54
PTPN12-206ENST00000435495 RBAK-RBAKDNI3L0D1 243 aa5.4□□□□□ -1.54
PTPN12-206ENST00000435495 ALDH1L1O75891 902 aa5.4□□□□□ -1.54
PTPN12-206ENST00000435495 CD2BP2O95400 341 aaKnown RBP5.4□□□□□ -1.54
PTPN12-206ENST00000435495 SETDB1Q15047 1291 aa5.4□□□□□ -1.54
PTPN12-206ENST00000435495 GNASQ5JWF2 1037 aa5.4□□□□□ -1.54
PTPN12-206ENST00000435495 GRIN3AQ8TCU5 1115 aa5.4□□□□□ -1.54
PTPN12-206ENST00000435495 STK35Q8TDR2 534 aa5.4□□□□□ -1.54
PTPN12-206ENST00000435495 ASAP3Q8TDY4 903 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms