RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 SMC5Q8IY18 1101 aa18.85■□□□□ 0.61
TREX1-201ENST00000433541 NSUN4Q96CB9 384 aaKnown RBP18.85■□□□□ 0.61
TREX1-201ENST00000433541 USP40Q9NVE5 1235 aa18.85■□□□□ 0.61
TREX1-201ENST00000433541 TTC41PQ6P2S7 1318 aa18.84■□□□□ 0.61
TREX1-201ENST00000433541 HTRA3P83110 453 aa18.84■□□□□ 0.61
TREX1-201ENST00000433541 APOBEC3HQ6NTF7 200 aaKnown RBP18.84■□□□□ 0.61
TREX1-201ENST00000433541 PAXIP1Q6ZW49 1069 aaPredicted RBP18.84■□□□□ 0.61
TREX1-201ENST00000433541 MAGEB6Q8N7X4 407 aa18.84■□□□□ 0.61
TREX1-201ENST00000433541 OTUD7AQ8TE49 926 aaPredicted RBP18.84■□□□□ 0.61
TREX1-201ENST00000433541 EDC3Q96F86 508 aaKnown RBP18.84■□□□□ 0.61
TREX1-201ENST00000433541 HAUS7Q99871 368 aa18.84■□□□□ 0.61
TREX1-201ENST00000433541 DEFB129Q9H1M3 183 aa18.84■□□□□ 0.61
TREX1-201ENST00000433541 CYP7A1P22680 504 aa18.83■□□□□ 0.6
TREX1-201ENST00000433541 CDC42EP5Q6NZY7 148 aa18.83■□□□□ 0.6
TREX1-201ENST00000433541 CHD1LQ86WJ1 897 aa18.83■□□□□ 0.6
TREX1-201ENST00000433541 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.83■□□□□ 0.6
TREX1-201ENST00000433541 CREBZFQ9NS37 354 aa18.83■□□□□ 0.6
TREX1-201ENST00000433541 GAKO14976 1311 aa18.82■□□□□ 0.6
TREX1-201ENST00000433541 BAG3O95817 575 aa18.82■□□□□ 0.6
TREX1-201ENST00000433541 MAP4K4O95819 1239 aaPredicted RBP18.82■□□□□ 0.6
TREX1-201ENST00000433541 NUCB1Q02818 461 aa18.82■□□□□ 0.6
TREX1-201ENST00000433541 RASA3Q14644 834 aa18.82■□□□□ 0.6
TREX1-201ENST00000433541 C2orf69Q8N8R5 385 aa18.82■□□□□ 0.6
TREX1-201ENST00000433541 PPP2R3BQ9Y5P8 575 aa18.82■□□□□ 0.6
TREX1-201ENST00000433541 GLRX3O76003 335 aaKnown RBP18.81■□□□□ 0.6
TREX1-201ENST00000433541 TCP10Q12799 353 aa18.81■□□□□ 0.6
TREX1-201ENST00000433541 PICALMQ13492 652 aa18.81■□□□□ 0.6
TREX1-201ENST00000433541 PRKG1Q13976 671 aa18.81■□□□□ 0.6
TREX1-201ENST00000433541 SLC9C2Q5TAH2 1124 aa18.81■□□□□ 0.6
TREX1-201ENST00000433541 GBA2Q9HCG7 927 aaPredicted RBP18.81■□□□□ 0.6
TREX1-201ENST00000433541 AATFQ9NY61 560 aaKnown RBP eCLIP18.81■□□□□ 0.6
TREX1-201ENST00000433541 GRM1Q13255 1194 aa18.8■□□□□ 0.6
TREX1-201ENST00000433541 CST9Q5W186 159 aa18.8■□□□□ 0.6
TREX1-201ENST00000433541 FAM163AQ96GL9 167 aaPredicted RBP18.8■□□□□ 0.6
TREX1-201ENST00000433541 CCDC136Q96JN2 1154 aa18.8■□□□□ 0.6
TREX1-201ENST00000433541 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.8■□□□□ 0.6
TREX1-201ENST00000433541 CDK5RAP2Q96SN8 1893 aa18.8■□□□□ 0.6
TREX1-201ENST00000433541 GPR75-ASB3A0A0A6YYF3 556 aa18.79■□□□□ 0.6
TREX1-201ENST00000433541 IGSF3O75054 1194 aa18.79■□□□□ 0.6
TREX1-201ENST00000433541 PLCG2P16885 1265 aa18.79■□□□□ 0.6
TREX1-201ENST00000433541 SUPT20HL1Q3ZLR7 823 aa18.79■□□□□ 0.6
TREX1-201ENST00000433541 ZSCAN25Q6NSZ9 544 aa18.79■□□□□ 0.6
TREX1-201ENST00000433541 ZSCAN29Q8IWY8 852 aaPredicted RBP18.79■□□□□ 0.6
TREX1-201ENST00000433541 TEX11Q8IYF3 940 aa18.79■□□□□ 0.6
TREX1-201ENST00000433541 MIGA1Q8NAN2 632 aa18.79■□□□□ 0.6
TREX1-201ENST00000433541 ZNF384Q8TF68 577 aa18.79■□□□□ 0.6
TREX1-201ENST00000433541 TMEM39BQ9GZU3 492 aa18.79■□□□□ 0.6
TREX1-201ENST00000433541 PAPPA2Q9BXP8 1791 aa18.78■□□□□ 0.6
TREX1-201ENST00000433541 PDE6AP16499 860 aa18.78■□□□□ 0.6
TREX1-201ENST00000433541 MKRN1Q9UHC7 482 aaKnown RBP18.78■□□□□ 0.6
TREX1-201ENST00000433541 RGS3P49796 1198 aa18.77■□□□□ 0.6
TREX1-201ENST00000433541 PDE1AP54750 535 aa18.77■□□□□ 0.6
TREX1-201ENST00000433541 HUNKP57058 714 aa18.77■□□□□ 0.6
TREX1-201ENST00000433541 LRRFIP1Q32MZ4 808 aaKnown RBP18.77■□□□□ 0.6
TREX1-201ENST00000433541 ARMC9Q7Z3E5 817 aa18.77■□□□□ 0.6
TREX1-201ENST00000433541 ADGRA1Q86SQ6 560 aa18.77■□□□□ 0.6
TREX1-201ENST00000433541 FAM83AQ86UY5 434 aa18.77■□□□□ 0.6
TREX1-201ENST00000433541 SH3RF3Q8TEJ3 882 aaPredicted RBP18.77■□□□□ 0.6
TREX1-201ENST00000433541 FSD1Q9BTV5 496 aa18.77■□□□□ 0.6
TREX1-201ENST00000433541 FOCADQ5VW36 1801 aa18.77■□□□□ 0.59
TREX1-201ENST00000433541 ZNF532Q9HCE3 1301 aa18.76■□□□□ 0.59
TREX1-201ENST00000433541 MAGEB6P1A0A0J9YX57 407 aa18.76■□□□□ 0.59
TREX1-201ENST00000433541 TRIM6-TRIM34B2RNG4 842 aa18.76■□□□□ 0.59
TREX1-201ENST00000433541 PPP1R12BO60237 982 aaPredicted RBP18.76■□□□□ 0.59
TREX1-201ENST00000433541 NFIAQ12857 509 aa18.76■□□□□ 0.59
TREX1-201ENST00000433541 NBPF12Q5TAG4 269 aaPredicted RBP18.76■□□□□ 0.59
TREX1-201ENST00000433541 FKBP1CQ5VVH2 108 aa18.76■□□□□ 0.59
TREX1-201ENST00000433541 TMED8Q6PL24 325 aaPredicted RBP18.76■□□□□ 0.59
TREX1-201ENST00000433541 PI4K2BQ8TCG2 481 aa18.76■□□□□ 0.59
TREX1-201ENST00000433541 HOOK2Q96ED9 719 aa18.76■□□□□ 0.59
TREX1-201ENST00000433541 ANGEL1Q9UNK9 670 aaKnown RBP18.76■□□□□ 0.59
TREX1-201ENST00000433541 MYH1P12882 1939 aa18.75■□□□□ 0.59
TREX1-201ENST00000433541 USP5P45974 858 aa18.75■□□□□ 0.59
TREX1-201ENST00000433541 DYNLL1P63167 89 aaKnown RBP18.75■□□□□ 0.59
TREX1-201ENST00000433541 DEFB115Q30KQ5 88 aa18.75■□□□□ 0.59
TREX1-201ENST00000433541 CERS3Q8IU89 383 aa18.75■□□□□ 0.59
TREX1-201ENST00000433541 FAM151AQ8WW52 585 aa18.75■□□□□ 0.59
TREX1-201ENST00000433541 TLL2Q9Y6L7 1015 aa18.75■□□□□ 0.59
TREX1-201ENST00000433541 CNTNAP1P78357 1384 aa18.75■□□□□ 0.59
TREX1-201ENST00000433541 SALL3Q9BXA9 1300 aa18.74■□□□□ 0.59
TREX1-201ENST00000433541 ADD2P35612 726 aa18.74■□□□□ 0.59
TREX1-201ENST00000433541 RHBDL3P58872 404 aa18.74■□□□□ 0.59
TREX1-201ENST00000433541 FKBP1BP68106 108 aa18.74■□□□□ 0.59
TREX1-201ENST00000433541 MOB2Q70IA6 237 aa18.74■□□□□ 0.59
TREX1-201ENST00000433541 CENPQQ7L2Z9 268 aaPredicted RBP18.74■□□□□ 0.59
TREX1-201ENST00000433541 SAPCD2Q86UD0 394 aa18.74■□□□□ 0.59
TREX1-201ENST00000433541 KBTBD3Q8NAB2 608 aa18.74■□□□□ 0.59
TREX1-201ENST00000433541 RILPL2Q969X0 211 aa18.74■□□□□ 0.59
TREX1-201ENST00000433541 FAM198AQ9UFP1 575 aa18.74■□□□□ 0.59
TREX1-201ENST00000433541 STAP2Q9UGK3 403 aa18.74■□□□□ 0.59
TREX1-201ENST00000433541 NAV1Q8NEY1 1877 aa18.73■□□□□ 0.59
TREX1-201ENST00000433541 UBE2Q2LH0YL09 131 aa18.73■□□□□ 0.59
TREX1-201ENST00000433541 ENTPD3O75355 529 aa18.73■□□□□ 0.59
TREX1-201ENST00000433541 WDHD1O75717 1129 aaPredicted RBP18.73■□□□□ 0.59
TREX1-201ENST00000433541 IREB2P48200 963 aaKnown RBP18.73■□□□□ 0.59
TREX1-201ENST00000433541 MAPKAPK5Q8IW41 473 aa18.73■□□□□ 0.59
TREX1-201ENST00000433541 TGFBRAP1Q8WUH2 860 aa18.73■□□□□ 0.59
TREX1-201ENST00000433541 CSRNP1Q96S65 589 aa18.73■□□□□ 0.59
TREX1-201ENST00000433541 IDI2Q9BXS1 227 aa18.73■□□□□ 0.59
TREX1-201ENST00000433541 FZD1Q9UP38 647 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms