RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 CCL15Q16663 113 aa27.08■■□□□ 1.93
RPUSD3-206ENST00000433535 CDC42EP5Q6NZY7 148 aa27.08■■□□□ 1.93
RPUSD3-206ENST00000433535 ZKSCAN4Q969J2 545 aaPredicted RBP27.08■■□□□ 1.93
RPUSD3-206ENST00000433535 CLUAP1Q96AJ1 413 aa27.08■■□□□ 1.93
RPUSD3-206ENST00000433535 SALL1Q9NSC2 1324 aa27.08■■□□□ 1.93
RPUSD3-206ENST00000433535 SPDYE5A6NIY4 337 aa27.07■■□□□ 1.92
RPUSD3-206ENST00000433535 SEMA3EO15041 775 aa27.07■■□□□ 1.92
RPUSD3-206ENST00000433535 GTF2A2P52657 109 aa27.07■■□□□ 1.92
RPUSD3-206ENST00000433535 NFIAQ12857 509 aa27.07■■□□□ 1.92
RPUSD3-206ENST00000433535 MTX1Q13505 466 aa27.07■■□□□ 1.92
RPUSD3-206ENST00000433535 ATF7IPQ6VMQ6 1270 aa27.07■■□□□ 1.92
RPUSD3-206ENST00000433535 MIGA2Q7L4E1 593 aa27.07■■□□□ 1.92
RPUSD3-206ENST00000433535 IPO8O15397 1037 aaKnown RBP27.06■■□□□ 1.92
RPUSD3-206ENST00000433535 TIMM10P62072 90 aa27.06■■□□□ 1.92
RPUSD3-206ENST00000433535 TFCP2Q12800 502 aa27.06■■□□□ 1.92
RPUSD3-206ENST00000433535 RASGRF1Q13972 1273 aa27.06■■□□□ 1.92
RPUSD3-206ENST00000433535 OTOP1Q7RTM1 612 aa27.06■■□□□ 1.92
RPUSD3-206ENST00000433535 CD99L2Q8TCZ2 262 aa27.06■■□□□ 1.92
RPUSD3-206ENST00000433535 HOOK2Q96ED9 719 aa27.06■■□□□ 1.92
RPUSD3-206ENST00000433535 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.06■■□□□ 1.92
RPUSD3-206ENST00000433535 MYH2Q9UKX2 1941 aa27.06■■□□□ 1.92
RPUSD3-206ENST00000433535 A0A1B0GUL7 405 aa27.05■■□□□ 1.92
RPUSD3-206ENST00000433535 DCAF15Q66K64 600 aa27.05■■□□□ 1.92
RPUSD3-206ENST00000433535 FAM151AQ8WW52 585 aa27.05■■□□□ 1.92
RPUSD3-206ENST00000433535 AK9Q5TCS8 1911 aa27.05■■□□□ 1.92
RPUSD3-206ENST00000433535 ERO1BQ86YB8 467 aa27.04■■□□□ 1.92
RPUSD3-206ENST00000433535 FAM43AQ8N2R8 423 aa27.04■■□□□ 1.92
RPUSD3-206ENST00000433535 ERO1AQ96HE7 468 aa27.04■■□□□ 1.92
RPUSD3-206ENST00000433535 INPP5BP32019 993 aa27.03■■□□□ 1.92
RPUSD3-206ENST00000433535 TAF1CQ15572 869 aaPredicted RBP27.03■■□□□ 1.92
RPUSD3-206ENST00000433535 XAGE2Q96GT9 111 aa27.03■■□□□ 1.92
RPUSD3-206ENST00000433535 ZNF341Q9BYN7 854 aa27.03■■□□□ 1.92
RPUSD3-206ENST00000433535 USP40Q9NVE5 1235 aa27.03■■□□□ 1.92
RPUSD3-206ENST00000433535 FAM198AQ9UFP1 575 aa27.03■■□□□ 1.92
RPUSD3-206ENST00000433535 DOCK2Q92608 1830 aa27.02■■□□□ 1.92
RPUSD3-206ENST00000433535 GNAI2P04899 355 aa27.02■■□□□ 1.92
RPUSD3-206ENST00000433535 CAP1Q01518 475 aa27.02■■□□□ 1.92
RPUSD3-206ENST00000433535 PNMA6EA0A0J9YXQ4 647 aa27.01■■□□□ 1.91
RPUSD3-206ENST00000433535 IRF6O14896 467 aa27.01■■□□□ 1.91
RPUSD3-206ENST00000433535 HNRNPUQ00839 825 aaKnown RBP eCLIP27.01■■□□□ 1.91
RPUSD3-206ENST00000433535 SP3Q02447 781 aa27.01■■□□□ 1.91
RPUSD3-206ENST00000433535 ZGPATQ8N5A5 531 aaKnown RBP27.01■■□□□ 1.91
RPUSD3-206ENST00000433535 ABCF2Q9UG63 623 aa27.01■■□□□ 1.91
RPUSD3-206ENST00000433535 AKAP2Q9Y2D5 859 aa27.01■■□□□ 1.91
RPUSD3-206ENST00000433535 GAKO14976 1311 aa27■■□□□ 1.91
RPUSD3-206ENST00000433535 DZIP1Q86YF9 867 aaKnown RBP27■■□□□ 1.91
RPUSD3-206ENST00000433535 ZFPM1Q8IX07 1006 aa27■■□□□ 1.91
RPUSD3-206ENST00000433535 MIER1Q8N108 512 aa27■■□□□ 1.91
RPUSD3-206ENST00000433535 TMEM57Q8N5G2 664 aa27■■□□□ 1.91
RPUSD3-206ENST00000433535 PDS5AQ29RF7 1337 aaKnown RBP26.99■■□□□ 1.91
RPUSD3-206ENST00000433535 ZBTB22O15209 634 aa26.99■■□□□ 1.91
RPUSD3-206ENST00000433535 CETPP11597 493 aa26.99■■□□□ 1.91
RPUSD3-206ENST00000433535 PPIL2Q13356 520 aa26.99■■□□□ 1.91
RPUSD3-206ENST00000433535 MVPQ14764 893 aaKnown RBP26.99■■□□□ 1.91
RPUSD3-206ENST00000433535 NEUROD6Q96NK8 337 aa26.99■■□□□ 1.91
RPUSD3-206ENST00000433535 ZFYVE28Q9HCC9 887 aa26.99■■□□□ 1.91
RPUSD3-206ENST00000433535 RFX7Q2KHR2 1363 aa26.98■■□□□ 1.91
RPUSD3-206ENST00000433535 SNAPC2Q13487 334 aa26.98■■□□□ 1.91
RPUSD3-206ENST00000433535 ZKSCAN2Q63HK3 967 aa26.98■■□□□ 1.91
RPUSD3-206ENST00000433535 EFCC1Q9HA90 598 aa26.98■■□□□ 1.91
RPUSD3-206ENST00000433535 PDE4DIPQ5VU43 2346 aa26.98■■□□□ 1.91
RPUSD3-206ENST00000433535 ZSWIM8A7E2V4 1837 aa26.97■■□□□ 1.91
RPUSD3-206ENST00000433535 BTBD19C9JJ37 291 aa26.97■■□□□ 1.91
RPUSD3-206ENST00000433535 TNRC18O15417 2968 aaPredicted RBP26.97■■□□□ 1.91
RPUSD3-206ENST00000433535 RGS3P49796 1198 aa26.97■■□□□ 1.91
RPUSD3-206ENST00000433535 PI16Q6UXB8 463 aa26.97■■□□□ 1.91
RPUSD3-206ENST00000433535 PTPN22Q9Y2R2 807 aa26.97■■□□□ 1.91
RPUSD3-206ENST00000433535 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.96■■□□□ 1.91
RPUSD3-206ENST00000433535 ZNF112Q9UJU3 913 aa26.96■■□□□ 1.91
RPUSD3-206ENST00000433535 ATRNL1Q5VV63 1379 aa26.96■■□□□ 1.91
RPUSD3-206ENST00000433535 PPATQ06203 517 aa26.95■■□□□ 1.9
RPUSD3-206ENST00000433535 MROH7-TTC4A0A0A0MT08 1334 aa26.94■■□□□ 1.9
RPUSD3-206ENST00000433535 BTDP43251 543 aa26.94■■□□□ 1.9
RPUSD3-206ENST00000433535 SPTY2D1Q68D10 685 aaPredicted RBP26.94■■□□□ 1.9
RPUSD3-206ENST00000433535 IDI2Q9BXS1 227 aa26.94■■□□□ 1.9
RPUSD3-206ENST00000433535 HMG20BQ9P0W2 317 aa26.94■■□□□ 1.9
RPUSD3-206ENST00000433535 HTTP42858 3142 aa26.94■■□□□ 1.9
RPUSD3-206ENST00000433535 MECOMQ03112 1051 aa26.93■■□□□ 1.9
RPUSD3-206ENST00000433535 G3BP1Q13283 466 aaKnown RBP eCLIP26.93■■□□□ 1.9
RPUSD3-206ENST00000433535 GORABQ5T7V8 394 aa26.93■■□□□ 1.9
RPUSD3-206ENST00000433535 ZNF384Q8TF68 577 aa26.93■■□□□ 1.9
RPUSD3-206ENST00000433535 ENTPD3O75355 529 aa26.92■■□□□ 1.9
RPUSD3-206ENST00000433535 WDHD1O75717 1129 aaPredicted RBP26.92■■□□□ 1.9
RPUSD3-206ENST00000433535 PICALMQ13492 652 aa26.92■■□□□ 1.9
RPUSD3-206ENST00000433535 NOL9Q5SY16 702 aaKnown RBP26.92■■□□□ 1.9
RPUSD3-206ENST00000433535 ERICH6Q7L0X2 663 aa26.92■■□□□ 1.9
RPUSD3-206ENST00000433535 SH3BP5LQ7L8J4 393 aa26.92■■□□□ 1.9
RPUSD3-206ENST00000433535 SLF2Q8IX21 1173 aa26.92■■□□□ 1.9
RPUSD3-206ENST00000433535 SPATA5Q8NB90 893 aa26.92■■□□□ 1.9
RPUSD3-206ENST00000433535 C1orf115Q9H7X2 142 aa26.92■■□□□ 1.9
RPUSD3-206ENST00000433535 ZCCHC17Q9NP64 241 aaKnown RBP26.92■■□□□ 1.9
RPUSD3-206ENST00000433535 DDX4Q9NQI0 724 aaKnown RBP26.92■■□□□ 1.9
RPUSD3-206ENST00000433535 TLR2O60603 784 aa26.91■■□□□ 1.9
RPUSD3-206ENST00000433535 SLURP2P0DP57 97 aa26.91■■□□□ 1.9
RPUSD3-206ENST00000433535 TBC1D9Q6ZT07 1266 aa26.91■■□□□ 1.9
RPUSD3-206ENST00000433535 ZSCAN29Q8IWY8 852 aaPredicted RBP26.91■■□□□ 1.9
RPUSD3-206ENST00000433535 KCNH4Q9UQ05 1017 aa26.91■■□□□ 1.9
RPUSD3-206ENST00000433535 ARID4AP29374 1257 aaPredicted RBP26.9■■□□□ 1.9
RPUSD3-206ENST00000433535 FAM163AQ96GL9 167 aaPredicted RBP26.9■■□□□ 1.9
RPUSD3-206ENST00000433535 ARHGAP39Q9C0H5 1083 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms