RNA–Protein interactions for RNA: ENST00000433496.5

RFC4-207, Transcript of replication factor C subunit 4, humanhuman

TSL 5 BASIC

Gene RFC4, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-207ENST00000433496 PRDX5P30044 214 aa11.91□□□□□ -0.5
RFC4-207ENST00000433496 ADORA1P30542 326 aa11.91□□□□□ -0.5
RFC4-207ENST00000433496 SPTY2D1Q68D10 685 aaPredicted RBP11.91□□□□□ -0.5
RFC4-207ENST00000433496 IFNL1Q8IU54 200 aa11.91□□□□□ -0.5
RFC4-207ENST00000433496 TMEM57Q8N5G2 664 aa11.91□□□□□ -0.5
RFC4-207ENST00000433496 OPTNQ96CV9 577 aa11.91□□□□□ -0.5
RFC4-207ENST00000433496 TEPSINQ96N21 525 aa11.91□□□□□ -0.5
RFC4-207ENST00000433496 FOXD4L1Q9NU39 408 aa11.91□□□□□ -0.5
RFC4-207ENST00000433496 ABCF2Q9UG63 623 aa11.91□□□□□ -0.5
RFC4-207ENST00000433496 TNNQ9UQP3 1299 aa11.91□□□□□ -0.5
RFC4-207ENST00000433496 DAGLAQ9Y4D2 1042 aa11.91□□□□□ -0.5
RFC4-207ENST00000433496 PDS5AQ29RF7 1337 aaKnown RBP11.9□□□□□ -0.5
RFC4-207ENST00000433496 GPR25O00155 361 aa11.9□□□□□ -0.5
RFC4-207ENST00000433496 WDHD1O75717 1129 aaPredicted RBP11.9□□□□□ -0.5
RFC4-207ENST00000433496 TIMM10P62072 90 aa11.9□□□□□ -0.5
RFC4-207ENST00000433496 MAP3K9P80192 1104 aa11.9□□□□□ -0.5
RFC4-207ENST00000433496 RASGRF1Q13972 1273 aa11.9□□□□□ -0.5
RFC4-207ENST00000433496 VGLL4Q14135 290 aa11.9□□□□□ -0.5
RFC4-207ENST00000433496 DIXDC1Q155Q3 683 aa11.9□□□□□ -0.5
RFC4-207ENST00000433496 PKN2Q16513 984 aaKnown RBP11.9□□□□□ -0.5
RFC4-207ENST00000433496 NOM1Q5C9Z4 860 aaKnown RBP11.9□□□□□ -0.5
RFC4-207ENST00000433496 APOBEC3HQ6NTF7 200 aaKnown RBP11.9□□□□□ -0.5
RFC4-207ENST00000433496 ZNF296Q8WUU4 475 aaPredicted RBP11.9□□□□□ -0.5
RFC4-207ENST00000433496 XAGE2Q96GT9 111 aa11.9□□□□□ -0.5
RFC4-207ENST00000433496 WRNIP1Q96S55 665 aa11.9□□□□□ -0.5
RFC4-207ENST00000433496 MAST2Q6P0Q8 1798 aa11.9□□□□□ -0.51
RFC4-207ENST00000433496 FKTNO75072 461 aa11.89□□□□□ -0.51
RFC4-207ENST00000433496 GTF2A2P52657 109 aa11.89□□□□□ -0.51
RFC4-207ENST00000433496 CDAN1Q8IWY9 1227 aa11.89□□□□□ -0.51
RFC4-207ENST00000433496 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.89□□□□□ -0.515e-6■□□□□ 9.5
RFC4-207ENST00000433496 OTUD5Q96G74 571 aa11.89□□□□□ -0.51
RFC4-207ENST00000433496 CFHR5Q9BXR6 569 aa11.89□□□□□ -0.51
RFC4-207ENST00000433496 ZNF341Q9BYN7 854 aa11.89□□□□□ -0.51
RFC4-207ENST00000433496 USP40Q9NVE5 1235 aa11.89□□□□□ -0.51
RFC4-207ENST00000433496 PNMA6EA0A0J9YXQ4 647 aa11.88□□□□□ -0.51
RFC4-207ENST00000433496 TCP10Q12799 353 aa11.88□□□□□ -0.51
RFC4-207ENST00000433496 CDC42EP5Q6NZY7 148 aa11.88□□□□□ -0.51
RFC4-207ENST00000433496 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.88□□□□□ -0.51
RFC4-207ENST00000433496 FAM151AQ8WW52 585 aa11.88□□□□□ -0.51
RFC4-207ENST00000433496 CCL15-CCL14A0A0B4J2E2 113 aa11.87□□□□□ -0.51
RFC4-207ENST00000433496 IGF2BP3O00425 579 aaKnown RBP eCLIP11.87□□□□□ -0.51
RFC4-207ENST00000433496 UQCRFS1P1P0C7P4 283 aa11.87□□□□□ -0.51
RFC4-207ENST00000433496 MS4A1P11836 297 aa11.87□□□□□ -0.51
RFC4-207ENST00000433496 GSTO1P78417 241 aa11.87□□□□□ -0.51
RFC4-207ENST00000433496 CCL15Q16663 113 aa11.87□□□□□ -0.51
RFC4-207ENST00000433496 ERICH6Q7L0X2 663 aa11.87□□□□□ -0.51
RFC4-207ENST00000433496 ERO1BQ86YB8 467 aa11.87□□□□□ -0.51
RFC4-207ENST00000433496 ZSCAN29Q8IWY8 852 aaPredicted RBP11.87□□□□□ -0.51
RFC4-207ENST00000433496 SPDYE5A6NIY4 337 aa11.86□□□□□ -0.51
RFC4-207ENST00000433496 SURF6O75683 361 aaKnown RBP11.86□□□□□ -0.51
RFC4-207ENST00000433496 CETPP11597 493 aa11.86□□□□□ -0.51
RFC4-207ENST00000433496 GJA5P36382 358 aa11.86□□□□□ -0.51
RFC4-207ENST00000433496 MLLT1Q03111 559 aaPredicted RBP11.86□□□□□ -0.51
RFC4-207ENST00000433496 TTC39AQ5SRH9 613 aa11.86□□□□□ -0.51
RFC4-207ENST00000433496 MIGA2Q7L4E1 593 aa11.86□□□□□ -0.51
RFC4-207ENST00000433496 SPATA5Q8NB90 893 aa11.86□□□□□ -0.51
RFC4-207ENST00000433496 ERO1AQ96HE7 468 aa11.86□□□□□ -0.51
RFC4-207ENST00000433496 NOL10Q9BSC4 688 aaKnown RBP11.86□□□□□ -0.51
RFC4-207ENST00000433496 C1orf115Q9H7X2 142 aa11.86□□□□□ -0.51
RFC4-207ENST00000433496 RAI14Q9P0K7 980 aa11.86□□□□□ -0.51
RFC4-207ENST00000433496 DOCK1Q14185 1865 aa11.86□□□□□ -0.51
RFC4-207ENST00000433496 MROH7-TTC4A0A0A0MT08 1334 aa11.86□□□□□ -0.51
RFC4-207ENST00000433496 GAKO14976 1311 aa11.86□□□□□ -0.51
RFC4-207ENST00000433496 LDHCP07864 332 aa11.85□□□□□ -0.51
RFC4-207ENST00000433496 BTDP43251 543 aa11.85□□□□□ -0.51
RFC4-207ENST00000433496 RGS3P49796 1198 aa11.85□□□□□ -0.51
RFC4-207ENST00000433496 ATP8B2P98198 1209 aa11.85□□□□□ -0.51
RFC4-207ENST00000433496 NFIAQ12857 509 aa11.85□□□□□ -0.51
RFC4-207ENST00000433496 CRHR2Q13324 411 aa11.85□□□□□ -0.51
RFC4-207ENST00000433496 SNAPC2Q13487 334 aa11.85□□□□□ -0.51
RFC4-207ENST00000433496 POLA2Q14181 598 aa11.85□□□□□ -0.51
RFC4-207ENST00000433496 TAF1CQ15572 869 aaPredicted RBP11.85□□□□□ -0.51
RFC4-207ENST00000433496 CCDC158Q5M9N0 1113 aa11.85□□□□□ -0.51
RFC4-207ENST00000433496 SSH3Q8TE77 659 aa11.85□□□□□ -0.51
RFC4-207ENST00000433496 ZKSCAN4Q969J2 545 aaPredicted RBP11.85□□□□□ -0.51
RFC4-207ENST00000433496 HMG20BQ9P0W2 317 aa11.85□□□□□ -0.51
RFC4-207ENST00000433496 LRP2BPQ9P2M1 347 aa11.85□□□□□ -0.51
RFC4-207ENST00000433496 SNCAIPQ9Y6H5 919 aa11.85□□□□□ -0.51
RFC4-207ENST00000433496 ATAD5Q96QE3 1844 aa11.84□□□□□ -0.51
RFC4-207ENST00000433496 TESPA1A2RU30 521 aaPredicted RBP11.84□□□□□ -0.51
RFC4-207ENST00000433496 ENTPD3O75355 529 aa11.84□□□□□ -0.51
RFC4-207ENST00000433496 ARID4AP29374 1257 aaPredicted RBP11.84□□□□□ -0.51
RFC4-207ENST00000433496 MECOMQ03112 1051 aa11.84□□□□□ -0.51
RFC4-207ENST00000433496 PPIL2Q13356 520 aa11.84□□□□□ -0.51
RFC4-207ENST00000433496 PICALMQ13492 652 aa11.84□□□□□ -0.51
RFC4-207ENST00000433496 ARHGEF6Q15052 776 aa11.84□□□□□ -0.51
RFC4-207ENST00000433496 TNNI3KQ59H18 835 aa11.84□□□□□ -0.51
RFC4-207ENST00000433496 FBXO46Q6PJ61 603 aaPredicted RBP11.84□□□□□ -0.51
RFC4-207ENST00000433496 BRI3BPQ8WY22 251 aa11.84□□□□□ -0.51
RFC4-207ENST00000433496 IDI2Q9BXS1 227 aa11.84□□□□□ -0.51
RFC4-207ENST00000433496 ZFYVE28Q9HCC9 887 aa11.84□□□□□ -0.51
RFC4-207ENST00000433496 GPR108Q9NPR9 543 aa11.84□□□□□ -0.51
RFC4-207ENST00000433496 HPS5Q9UPZ3 1129 aa11.84□□□□□ -0.51
RFC4-207ENST00000433496 TRIM17Q9Y577 477 aa11.84□□□□□ -0.51
RFC4-207ENST00000433496 FPGT-TNNI3KV9GXZ4 949 aa11.84□□□□□ -0.51
RFC4-207ENST00000433496 MYO5AQ9Y4I1 1855 aaKnown RBP11.84□□□□□ -0.51
RFC4-207ENST00000433496 CDK5RAP2Q96SN8 1893 aa11.83□□□□□ -0.52
RFC4-207ENST00000433496 RLBP1P12271 317 aa11.83□□□□□ -0.52
RFC4-207ENST00000433496 SOX10P56693 466 aa11.83□□□□□ -0.52
RFC4-207ENST00000433496 PPATQ06203 517 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms