RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 RPS12P25398 132 aaKnown RBP31.65■■■□□ 2.66
TMEM248-205ENST00000433271 BTDP43251 543 aa31.65■■■□□ 2.66
TMEM248-205ENST00000433271 SLC4A4Q9Y6R1 1079 aa31.65■■■□□ 2.66
TMEM248-205ENST00000433271 RPAP1Q9BWH6 1393 aaPredicted RBP31.65■■■□□ 2.66
TMEM248-205ENST00000433271 UTRNP46939 3433 aa31.64■■■□□ 2.66
TMEM248-205ENST00000433271 PLCG2P16885 1265 aa31.64■■■□□ 2.66
TMEM248-205ENST00000433271 HSPA4P34932 840 aa31.64■■■□□ 2.66
TMEM248-205ENST00000433271 OGFOD1Q8N543 542 aa31.64■■■□□ 2.66
TMEM248-205ENST00000433271 ZDHHC15Q96MV8 337 aa31.64■■■□□ 2.66
TMEM248-205ENST00000433271 HDAC9Q9UKV0 1011 aa31.64■■■□□ 2.66
TMEM248-205ENST00000433271 NECTIN1Q15223 517 aa31.64■■■□□ 2.65
TMEM248-205ENST00000433271 C9orf131Q5VYM1 1079 aa31.64■■■□□ 2.65
TMEM248-205ENST00000433271 CRNKL1Q9BZJ0 848 aaKnown RBP31.64■■■□□ 2.65
TMEM248-205ENST00000433271 APPP05067 770 aa31.63■■■□□ 2.65
TMEM248-205ENST00000433271 USP17L8P0C7I0 530 aa31.63■■■□□ 2.65
TMEM248-205ENST00000433271 MMP14P50281 582 aa31.63■■■□□ 2.65
TMEM248-205ENST00000433271 ZNF541Q9H0D2 1346 aa31.63■■■□□ 2.65
TMEM248-205ENST00000433271 GSG1L2A8MUP6 293 aa31.62■■■□□ 2.65
TMEM248-205ENST00000433271 PRKAB2O43741 272 aa31.62■■■□□ 2.65
TMEM248-205ENST00000433271 ALX1Q15699 326 aa31.62■■■□□ 2.65
TMEM248-205ENST00000433271 FGAP02671 866 aa31.61■■■□□ 2.65
TMEM248-205ENST00000433271 APOBEC3HQ6NTF7 200 aaKnown RBP31.61■■■□□ 2.65
TMEM248-205ENST00000433271 NACAP1Q9BZK3 213 aa31.61■■■□□ 2.65
TMEM248-205ENST00000433271 CTNNA3Q9UI47 895 aa31.61■■■□□ 2.65
TMEM248-205ENST00000433271 GJA3Q9Y6H8 435 aa31.61■■■□□ 2.65
TMEM248-205ENST00000433271 SH3RF3Q8TEJ3 882 aaPredicted RBP31.6■■■□□ 2.65
TMEM248-205ENST00000433271 DPF2Q92785 391 aa31.6■■■□□ 2.65
TMEM248-205ENST00000433271 RBM5P52756 815 aaKnown RBP eCLIP31.6■■■□□ 2.65
TMEM248-205ENST00000433271 RHBDL3P58872 404 aa31.6■■■□□ 2.65
TMEM248-205ENST00000433271 IFNL3Q8IZI9 196 aa31.6■■■□□ 2.65
TMEM248-205ENST00000433271 GPC2Q8N158 579 aa31.6■■■□□ 2.65
TMEM248-205ENST00000433271 ZMYM6O95789 1325 aa31.59■■■□□ 2.65
TMEM248-205ENST00000433271 RNF20Q5VTR2 975 aa31.59■■■□□ 2.65
TMEM248-205ENST00000433271 GIMAP6Q6P9H5 292 aa31.59■■■□□ 2.65
TMEM248-205ENST00000433271 SDR42E1Q8WUS8 393 aa31.59■■■□□ 2.65
TMEM248-205ENST00000433271 KCNB2Q92953 911 aa31.59■■■□□ 2.65
TMEM248-205ENST00000433271 ANAPC15P60006 121 aa31.58■■■□□ 2.65
TMEM248-205ENST00000433271 CFAP100Q494V2 611 aa31.58■■■□□ 2.65
TMEM248-205ENST00000433271 CREB3L3Q68CJ9 461 aa31.58■■■□□ 2.65
TMEM248-205ENST00000433271 EPB41L4AQ9HCS5 686 aaPredicted RBP31.58■■■□□ 2.65
TMEM248-205ENST00000433271 ATP8A2Q9NTI2 1148 aa31.58■■■□□ 2.65
TMEM248-205ENST00000433271 GMPSP49915 693 aaPredicted RBP31.57■■■□□ 2.64
TMEM248-205ENST00000433271 SLC27A2O14975 620 aa31.57■■■□□ 2.64
TMEM248-205ENST00000433271 NAPBQ9H115 298 aa31.57■■■□□ 2.64
TMEM248-205ENST00000433271 PALD1Q9ULE6 856 aa31.57■■■□□ 2.64
TMEM248-205ENST00000433271 ZNF280AP59817 542 aaPredicted RBP31.56■■■□□ 2.64
TMEM248-205ENST00000433271 TEX11Q8IYF3 940 aa31.56■■■□□ 2.64
TMEM248-205ENST00000433271 USP40Q9NVE5 1235 aa31.56■■■□□ 2.64
TMEM248-205ENST00000433271 ADAMTSL1Q8N6G6 1762 aa31.55■■■□□ 2.64
TMEM248-205ENST00000433271 ZKSCAN1P17029 563 aaPredicted RBP31.55■■■□□ 2.64
TMEM248-205ENST00000433271 CDC42EP5Q6NZY7 148 aa31.55■■■□□ 2.64
TMEM248-205ENST00000433271 MTMR14Q8NCE2 650 aa31.55■■■□□ 2.64
TMEM248-205ENST00000433271 DDRGK1Q96HY6 314 aa31.55■■■□□ 2.64
TMEM248-205ENST00000433271 DCP1AQ9NPI6 582 aaPredicted RBP31.55■■■□□ 2.64
TMEM248-205ENST00000433271 RBM19Q9Y4C8 960 aaKnown RBP31.55■■■□□ 2.64
TMEM248-205ENST00000433271 PCDHAC2Q9Y5I4 1007 aa31.55■■■□□ 2.64
TMEM248-205ENST00000433271 TIAM2Q8IVF5 1701 aa31.55■■■□□ 2.64
TMEM248-205ENST00000433271 TDO2P48775 406 aa31.54■■■□□ 2.64
TMEM248-205ENST00000433271 DLGAP5Q15398 846 aa31.54■■■□□ 2.64
TMEM248-205ENST00000433271 RASEFQ8IZ41 740 aa31.54■■■□□ 2.64
TMEM248-205ENST00000433271 IL17RAQ96F46 866 aa31.54■■■□□ 2.64
TMEM248-205ENST00000433271 ZC3H4Q9UPT8 1303 aaKnown RBP31.54■■■□□ 2.64
TMEM248-205ENST00000433271 CYP21A2P08686 494 aa31.53■■■□□ 2.64
TMEM248-205ENST00000433271 USP5P45974 858 aa31.53■■■□□ 2.64
TMEM248-205ENST00000433271 IMMTQ16891 758 aaKnown RBP31.53■■■□□ 2.64
TMEM248-205ENST00000433271 TGFBRAP1Q8WUH2 860 aa31.53■■■□□ 2.64
TMEM248-205ENST00000433271 KIF2CQ99661 725 aa31.53■■■□□ 2.64
TMEM248-205ENST00000433271 MKRN1Q9UHC7 482 aaKnown RBP31.53■■■□□ 2.64
TMEM248-205ENST00000433271 SNX14Q9Y5W7 946 aa31.53■■■□□ 2.64
TMEM248-205ENST00000433271 SPDYE2BA6NHP3 402 aa31.53■■■□□ 2.64
TMEM248-205ENST00000433271 SPDYE6P0CI01 402 aa31.53■■■□□ 2.64
TMEM248-205ENST00000433271 TSGA10IPQ3SY00 556 aa31.53■■■□□ 2.64
TMEM248-205ENST00000433271 PRMT6Q96LA8 375 aaPredicted RBP31.53■■■□□ 2.64
TMEM248-205ENST00000433271 CNOT7Q9UIV1 285 aaKnown RBP31.53■■■□□ 2.64
TMEM248-205ENST00000433271 MICALL2Q8IY33 904 aa31.51■■■□□ 2.63
TMEM248-205ENST00000433271 MYOZ2Q9NPC6 264 aa31.51■■■□□ 2.63
TMEM248-205ENST00000433271 ZNF213O14771 459 aa31.5■■■□□ 2.63
TMEM248-205ENST00000433271 WDHD1O75717 1129 aaPredicted RBP31.5■■■□□ 2.63
TMEM248-205ENST00000433271 SHTN1A0MZ66 631 aa31.49■■■□□ 2.63
TMEM248-205ENST00000433271 ZBED3Q96IU2 234 aaPredicted RBP31.49■■■□□ 2.63
TMEM248-205ENST00000433271 DDNO94850 711 aaPredicted RBP31.48■■■□□ 2.63
TMEM248-205ENST00000433271 HAND2P61296 217 aa31.48■■■□□ 2.63
TMEM248-205ENST00000433271 DPY19L2Q6NUT2 758 aa31.48■■■□□ 2.63
TMEM248-205ENST00000433271 CTR9Q6PD62 1173 aa31.48■■■□□ 2.63
TMEM248-205ENST00000433271 MAPKAPK5Q8IW41 473 aa31.48■■■□□ 2.63
TMEM248-205ENST00000433271 TDRD3Q9H7E2 651 aaKnown RBP31.48■■■□□ 2.63
TMEM248-205ENST00000433271 GPRC5DQ9NZD1 345 aa31.48■■■□□ 2.63
TMEM248-205ENST00000433271 TAF6LQ9Y6J9 622 aa31.48■■■□□ 2.63
TMEM248-205ENST00000433271 FLT1P17948 1338 aa31.48■■■□□ 2.63
TMEM248-205ENST00000433271 USP17L12C9JPN9 530 aa31.47■■■□□ 2.63
TMEM248-205ENST00000433271 USP17L21D6R901 530 aa31.47■■■□□ 2.63
TMEM248-205ENST00000433271 H7C1D1 291 aa31.47■■■□□ 2.63
TMEM248-205ENST00000433271 KRT32Q14532 448 aa31.47■■■□□ 2.63
TMEM248-205ENST00000433271 SBK1Q52WX2 424 aa31.47■■■□□ 2.63
TMEM248-205ENST00000433271 MCM9Q9NXL9 1143 aa31.47■■■□□ 2.63
TMEM248-205ENST00000433271 ARPP21Q9UBL0 812 aaPredicted RBP31.47■■■□□ 2.63
TMEM248-205ENST00000433271 CDK5RAP2Q96SN8 1893 aa31.47■■■□□ 2.63
TMEM248-205ENST00000433271 DCAF8L1A6NGE4 600 aa31.46■■■□□ 2.63
TMEM248-205ENST00000433271 IDI2Q9BXS1 227 aa31.46■■■□□ 2.63
TMEM248-205ENST00000433271 WNT10BO00744 389 aa31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms