RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 AKAP4Q5JQC9 854 aa4.23□□□□□ -1.73
CDC40-204ENST00000431461 SLC23A3Q6PIS1 610 aa4.23□□□□□ -1.73
CDC40-204ENST00000431461 PLD6Q8N2A8 252 aaKnown RBP4.23□□□□□ -1.73
CDC40-204ENST00000431461 FAM181AQ8N9Y4 354 aa4.23□□□□□ -1.73
CDC40-204ENST00000431461 ZKSCAN3Q9BRR0 538 aa4.23□□□□□ -1.73
CDC40-204ENST00000431461 BHLHE41Q9C0J9 482 aaPredicted RBP4.23□□□□□ -1.73
CDC40-204ENST00000431461 SEMA6CQ9H3T2 930 aa4.23□□□□□ -1.73
CDC40-204ENST00000431461 GSX1Q9H4S2 264 aaPredicted RBP4.23□□□□□ -1.73
CDC40-204ENST00000431461 ACSS3Q9H6R3 686 aa4.23□□□□□ -1.73
CDC40-204ENST00000431461 SLAIN2Q9P270 581 aa4.23□□□□□ -1.73
CDC40-204ENST00000431461 SEPT3Q9UH03 358 aa4.23□□□□□ -1.73
CDC40-204ENST00000431461 DAGLAQ9Y4D2 1042 aa4.23□□□□□ -1.73
CDC40-204ENST00000431461 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.22□□□□□ -1.73
CDC40-204ENST00000431461 EDN3P14138 238 aa4.22□□□□□ -1.73
CDC40-204ENST00000431461 DNM1Q05193 864 aaKnown RBP4.22□□□□□ -1.73
CDC40-204ENST00000431461 KCNMB1Q16558 191 aa4.22□□□□□ -1.73
CDC40-204ENST00000431461 MLANAQ16655 118 aa4.22□□□□□ -1.73
CDC40-204ENST00000431461 HELQQ8TDG4 1101 aa4.22□□□□□ -1.73
CDC40-204ENST00000431461 C1GALT1Q9NS00 363 aa4.22□□□□□ -1.73
CDC40-204ENST00000431461 FAM105AQ9NUU6 356 aa4.22□□□□□ -1.73
CDC40-204ENST00000431461 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.22□□□□□ -1.73
CDC40-204ENST00000431461 SYNGAP1Q96PV0 1343 aa4.21□□□□□ -1.73
CDC40-204ENST00000431461 ZNF503-AS2A6NEH8 195 aa4.21□□□□□ -1.74
CDC40-204ENST00000431461 METTL12A8MUP2 240 aa4.21□□□□□ -1.74
CDC40-204ENST00000431461 EREGO14944 169 aa4.21□□□□□ -1.74
CDC40-204ENST00000431461 TNFRSF21O75509 655 aa4.21□□□□□ -1.74
CDC40-204ENST00000431461 ATP2B4P23634 1241 aa4.21□□□□□ -1.74
CDC40-204ENST00000431461 NRSN2Q9GZP1 204 aa4.21□□□□□ -1.74
CDC40-204ENST00000431461 NFIBO00712 420 aa4.2□□□□□ -1.74
CDC40-204ENST00000431461 CTSBP07858 339 aa4.2□□□□□ -1.74
CDC40-204ENST00000431461 EIF1AXP47813 144 aaKnown RBP4.2□□□□□ -1.74
CDC40-204ENST00000431461 EHHADHQ08426 723 aa4.2□□□□□ -1.74
CDC40-204ENST00000431461 ECM1Q16610 540 aa4.2□□□□□ -1.74
CDC40-204ENST00000431461 IFI16Q16666 785 aaKnown RBP4.2□□□□□ -1.74
CDC40-204ENST00000431461 ANGEL2Q5VTE6 544 aaKnown RBP4.2□□□□□ -1.74
CDC40-204ENST00000431461 PEAR1Q5VY43 1037 aaPredicted RBP4.2□□□□□ -1.74
CDC40-204ENST00000431461 ALKBH2Q6NS38 261 aa4.2□□□□□ -1.74
CDC40-204ENST00000431461 SYDE1Q6ZW31 735 aaPredicted RBP4.2□□□□□ -1.74
CDC40-204ENST00000431461 PRDM7Q9NQW5 492 aa4.2□□□□□ -1.74
CDC40-204ENST00000431461 U3KQE9 123 aa4.2□□□□□ -1.74
CDC40-204ENST00000431461 TMEM265A0A087WTH1 108 aa4.19□□□□□ -1.74
CDC40-204ENST00000431461 PHACTR2O75167 634 aa4.19□□□□□ -1.74
CDC40-204ENST00000431461 ECEL1O95672 775 aa4.19□□□□□ -1.74
CDC40-204ENST00000431461 MAOBP27338 520 aa4.19□□□□□ -1.74
CDC40-204ENST00000431461 CDK5R2Q13319 367 aa4.19□□□□□ -1.74
CDC40-204ENST00000431461 HRASLS5Q96KN8 279 aa4.19□□□□□ -1.74
CDC40-204ENST00000431461 LATS2Q9NRM7 1088 aa4.19□□□□□ -1.74
CDC40-204ENST00000431461 RAD18Q9NS91 495 aa4.19□□□□□ -1.74
CDC40-204ENST00000431461 POLIQ9UNA4 740 aa4.19□□□□□ -1.74
CDC40-204ENST00000431461 SNX11Q9Y5W9 270 aa4.19□□□□□ -1.74
CDC40-204ENST00000431461 IGHA2P01877 340 aa4.18□□□□□ -1.74
CDC40-204ENST00000431461 CYP11A1P05108 521 aa4.18□□□□□ -1.74
CDC40-204ENST00000431461 INHBBP09529 407 aa4.18□□□□□ -1.74
CDC40-204ENST00000431461 NPR3P17342 541 aa4.18□□□□□ -1.74
CDC40-204ENST00000431461 MPSTP25325 297 aa4.18□□□□□ -1.74
CDC40-204ENST00000431461 AFMP43652 599 aa4.18□□□□□ -1.74
CDC40-204ENST00000431461 ASPAP45381 313 aa4.18□□□□□ -1.74
CDC40-204ENST00000431461 USP5P45974 858 aa4.18□□□□□ -1.74
CDC40-204ENST00000431461 SNX29Q8TEQ0 813 aa4.18□□□□□ -1.74
CDC40-204ENST00000431461 PBXIP1Q96AQ6 731 aa4.18□□□□□ -1.74
CDC40-204ENST00000431461 A0A096LPE4 126 aa4.17□□□□□ -1.74
CDC40-204ENST00000431461 A0A1W2PPZ6 126 aa4.17□□□□□ -1.74
CDC40-204ENST00000431461 KRT1P04264 644 aa4.17□□□□□ -1.74
CDC40-204ENST00000431461 FAM87AP0C7U9 286 aa4.17□□□□□ -1.74
CDC40-204ENST00000431461 C1QTNF9P0C862 333 aa4.17□□□□□ -1.74
CDC40-204ENST00000431461 ITIH2P19823 946 aa4.17□□□□□ -1.74
CDC40-204ENST00000431461 AOC3Q16853 763 aa4.17□□□□□ -1.74
CDC40-204ENST00000431461 ZNF423Q2M1K9 1284 aa4.17□□□□□ -1.74
CDC40-204ENST00000431461 ARHGAP27Q6ZUM4 889 aa4.17□□□□□ -1.74
CDC40-204ENST00000431461 FBXO15Q8NCQ5 510 aaPredicted RBP4.17□□□□□ -1.74
CDC40-204ENST00000431461 RELTQ969Z4 430 aa4.17□□□□□ -1.74
CDC40-204ENST00000431461 LIN37Q96GY3 246 aaPredicted RBP4.17□□□□□ -1.74
CDC40-204ENST00000431461 CLEC4MQ9H2X3 399 aaPredicted RBP4.17□□□□□ -1.74
CDC40-204ENST00000431461 ZFYVE28Q9HCC9 887 aa4.17□□□□□ -1.74
CDC40-204ENST00000431461 CRIM1Q9NZV1 1036 aa4.17□□□□□ -1.74
CDC40-204ENST00000431461 FOXD3Q9UJU5 478 aaPredicted RBP4.17□□□□□ -1.74
CDC40-204ENST00000431461 TIMELESSQ9UNS1 1208 aa4.17□□□□□ -1.74
CDC40-204ENST00000431461 AMOTL2Q9Y2J4 779 aa4.17□□□□□ -1.74
CDC40-204ENST00000431461 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.16□□□□□ -1.74
CDC40-204ENST00000431461 GLI1P08151 1106 aa4.16□□□□□ -1.74
CDC40-204ENST00000431461 PCDH1Q08174 1060 aa4.16□□□□□ -1.74
CDC40-204ENST00000431461 POU4F3Q15319 338 aa4.16□□□□□ -1.74
CDC40-204ENST00000431461 CCNJLQ8IV13 435 aa4.16□□□□□ -1.74
CDC40-204ENST00000431461 GTF3C2Q8WUA4 911 aaPredicted RBP4.16□□□□□ -1.74
CDC40-204ENST00000431461 BORCS6Q96GS4 357 aa4.16□□□□□ -1.74
CDC40-204ENST00000431461 POLR3DP05423 398 aaPredicted RBP4.15□□□□□ -1.75
CDC40-204ENST00000431461 MED14OSP0DP75 135 aa4.15□□□□□ -1.75
CDC40-204ENST00000431461 SSFA2P28290 1259 aa4.15□□□□□ -1.75
CDC40-204ENST00000431461 PDE3AQ14432 1141 aa4.15□□□□□ -1.75
CDC40-204ENST00000431461 CIAPIN1Q6FI81 312 aa4.15□□□□□ -1.75
CDC40-204ENST00000431461 DDX54Q8TDD1 881 aaKnown RBP4.15□□□□□ -1.75
CDC40-204ENST00000431461 ASB11Q8WXH4 323 aa4.15□□□□□ -1.75
CDC40-204ENST00000431461 LEFTY1O75610 366 aa4.14□□□□□ -1.75
CDC40-204ENST00000431461 FAM13AO94988 1023 aa4.14□□□□□ -1.75
CDC40-204ENST00000431461 CEACAM5P06731 702 aa4.14□□□□□ -1.75
CDC40-204ENST00000431461 TMEM253P0C7T8 217 aa4.14□□□□□ -1.75
CDC40-204ENST00000431461 GRIA4P48058 902 aa4.14□□□□□ -1.75
CDC40-204ENST00000431461 AAMPQ13685 434 aa4.14□□□□□ -1.75
CDC40-204ENST00000431461 PRR23BQ6ZRT6 265 aa4.14□□□□□ -1.75
CDC40-204ENST00000431461 TCF12Q99081 682 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms