RNA–Protein interactions for RNA: ENST00000431311.1

LINC01343-201, Transcript of long intergenic non-protein coding RNA 1343, humanhuman

TSL 3 BASIC

Gene LINC01343, Length 2,283 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01343-201ENST00000431311 SFPQP23246 707 aaKnown RBP eCLIP12.23□□□□□ -0.45
LINC01343-201ENST00000431311 RFC5P40937 340 aa12.23□□□□□ -0.45
LINC01343-201ENST00000431311 SLC39A6Q13433 755 aa12.23□□□□□ -0.45
LINC01343-201ENST00000431311 ARMCX5Q6P1M9 558 aa12.23□□□□□ -0.45
LINC01343-201ENST00000431311 ZNF790Q6PG37 636 aa12.23□□□□□ -0.45
LINC01343-201ENST00000431311 TMC6Q7Z403 805 aa12.23□□□□□ -0.45
LINC01343-201ENST00000431311 MRPS27Q92552 414 aaKnown RBP12.23□□□□□ -0.45
LINC01343-201ENST00000431311 SIL1Q9H173 461 aa12.23□□□□□ -0.45
LINC01343-201ENST00000431311 CTDNEP1O95476 244 aa12.22□□□□□ -0.45
LINC01343-201ENST00000431311 HMGB1P09429 215 aaKnown RBP12.22□□□□□ -0.45
LINC01343-201ENST00000431311 NUDT7P0C024 238 aa12.22□□□□□ -0.45
LINC01343-201ENST00000431311 PNMA6AP0CW24 399 aaPredicted RBP12.22□□□□□ -0.45
LINC01343-201ENST00000431311 CDK11BP21127 795 aaKnown RBP12.22□□□□□ -0.45
LINC01343-201ENST00000431311 ME1P48163 572 aa12.22□□□□□ -0.45
LINC01343-201ENST00000431311 PRSS12P56730 875 aa12.22□□□□□ -0.45
LINC01343-201ENST00000431311 LRRN4CLQ8ND94 238 aa12.22□□□□□ -0.45
LINC01343-201ENST00000431311 EDC3Q96F86 508 aaKnown RBP12.22□□□□□ -0.45
LINC01343-201ENST00000431311 XPO4Q9C0E2 1151 aaKnown RBP12.22□□□□□ -0.45
LINC01343-201ENST00000431311 PRDM11Q9NQV5 511 aa12.22□□□□□ -0.45
LINC01343-201ENST00000431311 LIMD1Q9UGP4 676 aa12.22□□□□□ -0.45
LINC01343-201ENST00000431311 PHLPP2Q6ZVD8 1323 aa12.22□□□□□ -0.45
LINC01343-201ENST00000431311 SALL1Q9NSC2 1324 aa12.22□□□□□ -0.45
LINC01343-201ENST00000431311 PKD1L3Q7Z443 1732 aa12.22□□□□□ -0.45
LINC01343-201ENST00000431311 CCP110O43303 1012 aa12.22□□□□□ -0.45
LINC01343-201ENST00000431311 SMC2O95347 1197 aa12.22□□□□□ -0.45
LINC01343-201ENST00000431311 ATP5JP18859 108 aa12.22□□□□□ -0.45
LINC01343-201ENST00000431311 ARHGAP29Q52LW3 1261 aa12.22□□□□□ -0.45
LINC01343-201ENST00000431311 LRRC2Q9BYS8 371 aa12.22□□□□□ -0.45
LINC01343-201ENST00000431311 ARGLU1Q9NWB6 273 aaPredicted RBP12.22□□□□□ -0.45
LINC01343-201ENST00000431311 WDR17Q8IZU2 1322 aa12.21□□□□□ -0.45
LINC01343-201ENST00000431311 A0A1W2PQ27 194 aa12.21□□□□□ -0.45
LINC01343-201ENST00000431311 A0A1W2PQ64 194 aa12.21□□□□□ -0.45
LINC01343-201ENST00000431311 A0A1W2PQD8 194 aa12.21□□□□□ -0.45
LINC01343-201ENST00000431311 TULP2O00295 520 aa12.21□□□□□ -0.45
LINC01343-201ENST00000431311 ZRANB2O95218 330 aaKnown RBP eCLIP12.21□□□□□ -0.45
LINC01343-201ENST00000431311 PLA2G4AP47712 749 aa12.21□□□□□ -0.45
LINC01343-201ENST00000431311 TPM4P67936 248 aa12.21□□□□□ -0.45
LINC01343-201ENST00000431311 SLC20A2Q08357 652 aa12.21□□□□□ -0.45
LINC01343-201ENST00000431311 ADALQ6DHV7 355 aa12.21□□□□□ -0.45
LINC01343-201ENST00000431311 ERCC4Q92889 916 aaPredicted RBP12.21□□□□□ -0.45
LINC01343-201ENST00000431311 DCAF5Q96JK2 942 aa12.21□□□□□ -0.45
LINC01343-201ENST00000431311 SDF4Q9BRK5 362 aa12.21□□□□□ -0.45
LINC01343-201ENST00000431311 IFNKQ9P0W0 207 aa12.21□□□□□ -0.45
LINC01343-201ENST00000431311 KIAA1468Q9P260 1216 aa12.21□□□□□ -0.45
LINC01343-201ENST00000431311 PCDHA7Q9UN72 937 aa12.21□□□□□ -0.45
LINC01343-201ENST00000431311 LTBP4Q8N2S1 1624 aa12.21□□□□□ -0.46
LINC01343-201ENST00000431311 ZRSR1Q15695 479 aaKnown RBP12.21□□□□□ -0.46
LINC01343-201ENST00000431311 DPCR1Q3MIW9 517 aa12.21□□□□□ -0.46
LINC01343-201ENST00000431311 MCMDC2Q4G0Z9 681 aa12.21□□□□□ -0.46
LINC01343-201ENST00000431311 CCDC129Q6ZRS4 1044 aa12.21□□□□□ -0.46
LINC01343-201ENST00000431311 STOX1Q6ZVD7 989 aa12.21□□□□□ -0.46
LINC01343-201ENST00000431311 DHX32Q7L7V1 743 aaKnown RBP12.21□□□□□ -0.46
LINC01343-201ENST00000431311 AGXT2Q9BYV1 514 aa12.21□□□□□ -0.46
LINC01343-201ENST00000431311 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.21□□□□□ -0.46
LINC01343-201ENST00000431311 COL5A2P05997 1499 aaPredicted RBP12.2□□□□□ -0.46
LINC01343-201ENST00000431311 DDX58O95786 925 aaKnown RBP12.2□□□□□ -0.46
LINC01343-201ENST00000431311 ETF1P62495 437 aaKnown RBP12.2□□□□□ -0.46
LINC01343-201ENST00000431311 TMCO3Q6UWJ1 677 aa12.2□□□□□ -0.46
LINC01343-201ENST00000431311 SRRTQ9BXP5 876 aaKnown RBP12.2□□□□□ -0.46
LINC01343-201ENST00000431311 RTEL1Q9NZ71 1219 aa12.2□□□□□ -0.46
LINC01343-201ENST00000431311 ORC3Q9UBD5 711 aaPredicted RBP12.2□□□□□ -0.46
LINC01343-201ENST00000431311 FAM198AQ9UFP1 575 aa12.2□□□□□ -0.46
LINC01343-201ENST00000431311 AFDNP55196 1824 aaKnown RBP12.2□□□□□ -0.46
LINC01343-201ENST00000431311 APOBRQ0VD83 1088 aa12.2□□□□□ -0.46
LINC01343-201ENST00000431311 KLHDC4Q8TBB5 520 aa12.2□□□□□ -0.46
LINC01343-201ENST00000431311 RBM46Q8TBY0 533 aaKnown RBP12.2□□□□□ -0.46
LINC01343-201ENST00000431311 UBXN4Q92575 508 aa12.2□□□□□ -0.46
LINC01343-201ENST00000431311 ABCA3Q99758 1704 aa12.2□□□□□ -0.46
LINC01343-201ENST00000431311 NEDD4P46934 1319 aa12.19□□□□□ -0.46
LINC01343-201ENST00000431311 CARMIL3Q8ND23 1372 aa12.19□□□□□ -0.46
LINC01343-201ENST00000431311 A0A1B0GVL5 298 aa12.19□□□□□ -0.46
LINC01343-201ENST00000431311 ATP8B1O43520 1251 aa12.19□□□□□ -0.46
LINC01343-201ENST00000431311 NLRP12P59046 1061 aa12.19□□□□□ -0.46
LINC01343-201ENST00000431311 TEX35Q5T0J7 233 aa12.19□□□□□ -0.46
LINC01343-201ENST00000431311 HOMER1Q86YM7 354 aa12.19□□□□□ -0.46
LINC01343-201ENST00000431311 SYTL4Q96C24 671 aaPredicted RBP12.19□□□□□ -0.46
LINC01343-201ENST00000431311 ZNF496Q96IT1 587 aaPredicted RBP12.19□□□□□ -0.46
LINC01343-201ENST00000431311 SEC62Q99442 399 aaKnown RBP12.19□□□□□ -0.46
LINC01343-201ENST00000431311 DNAJC2Q99543 621 aaKnown RBP12.19□□□□□ -0.46
LINC01343-201ENST00000431311 DDX21Q9NR30 783 aaKnown RBP eCLIP12.19□□□□□ -0.46
LINC01343-201ENST00000431311 DBNLQ9UJU6 430 aaKnown RBP12.19□□□□□ -0.46
LINC01343-201ENST00000431311 NHSL1Q5SYE7 1610 aa12.19□□□□□ -0.46
LINC01343-201ENST00000431311 SH3TC1Q8TE82 1336 aa12.19□□□□□ -0.46
LINC01343-201ENST00000431311 NDUFA8P51970 172 aa12.18□□□□□ -0.46
LINC01343-201ENST00000431311 EXOSC10Q01780 885 aaKnown RBP12.18□□□□□ -0.46
LINC01343-201ENST00000431311 TNNI3KQ59H18 835 aa12.18□□□□□ -0.46
LINC01343-201ENST00000431311 TOM1L2Q6ZVM7 507 aa12.18□□□□□ -0.46
LINC01343-201ENST00000431311 CHMP4CQ96CF2 233 aa12.18□□□□□ -0.46
LINC01343-201ENST00000431311 FPGT-TNNI3KV9GXZ4 949 aa12.18□□□□□ -0.46
LINC01343-201ENST00000431311 C5P01031 1676 aa12.18□□□□□ -0.46
LINC01343-201ENST00000431311 TADA3O75528 432 aa12.18□□□□□ -0.46
LINC01343-201ENST00000431311 TPM1P09493 284 aa12.18□□□□□ -0.46
LINC01343-201ENST00000431311 HNRNPH2P55795 449 aaKnown RBP12.18□□□□□ -0.46
LINC01343-201ENST00000431311 CCT2P78371 535 aaKnown RBP12.18□□□□□ -0.46
LINC01343-201ENST00000431311 GUCY1B3Q02153 619 aa12.18□□□□□ -0.46
LINC01343-201ENST00000431311 NCAPHQ15003 741 aa12.18□□□□□ -0.46
LINC01343-201ENST00000431311 LINC00301Q8NCQ3 95 aa12.18□□□□□ -0.46
LINC01343-201ENST00000431311 BANK1Q8NDB2 785 aa12.18□□□□□ -0.46
LINC01343-201ENST00000431311 MNS1Q8NEH6 495 aa12.18□□□□□ -0.46
LINC01343-201ENST00000431311 SPIRE2Q8WWL2 714 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms