RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 PIDD1Q9HB75 910 aa8.91□□□□□ -0.98
PTPN4-204ENST00000431283 FAM105AQ9NUU6 356 aa8.91□□□□□ -0.98
PTPN4-204ENST00000431283 DAGLAQ9Y4D2 1042 aa8.91□□□□□ -0.98
PTPN4-204ENST00000431283 HOXA10P31260 410 aaPredicted RBP8.9□□□□□ -0.98
PTPN4-204ENST00000431283 WDR18Q9BV38 432 aa8.9□□□□□ -0.98
PTPN4-204ENST00000431283 SEMA6CQ9H3T2 930 aa8.9□□□□□ -0.98
PTPN4-204ENST00000431283 TMEM39AQ9NV64 488 aa8.9□□□□□ -0.98
PTPN4-204ENST00000431283 OAS3Q9Y6K5 1087 aaKnown RBP8.9□□□□□ -0.98
PTPN4-204ENST00000431283 SYNGAP1Q96PV0 1343 aa8.89□□□□□ -0.99
PTPN4-204ENST00000431283 PNMA6FA0A0J9YX94 578 aa8.89□□□□□ -0.99
PTPN4-204ENST00000431283 PAX4O43316 350 aa8.89□□□□□ -0.99
PTPN4-204ENST00000431283 ZSCAN29Q8IWY8 852 aaPredicted RBP8.89□□□□□ -0.99
PTPN4-204ENST00000431283 BCO2Q9BYV7 579 aa8.89□□□□□ -0.99
PTPN4-204ENST00000431283 ACSS3Q9H6R3 686 aa8.89□□□□□ -0.99
PTPN4-204ENST00000431283 AKAP2Q9Y2D5 859 aa8.89□□□□□ -0.99
PTPN4-204ENST00000431283 GSTP1P09211 210 aaKnown RBP8.88□□□□□ -0.99
PTPN4-204ENST00000431283 LIG1P18858 919 aa8.88□□□□□ -0.99
PTPN4-204ENST00000431283 ADMP35318 185 aa8.88□□□□□ -0.99
PTPN4-204ENST00000431283 FAAP100Q0VG06 881 aa8.88□□□□□ -0.99
PTPN4-204ENST00000431283 GLIS3Q8NEA6 775 aa8.88□□□□□ -0.99
PTPN4-204ENST00000431283 ATXN3LQ9H3M9 355 aa8.88□□□□□ -0.99
PTPN4-204ENST00000431283 LRRC4CQ9HCJ2 640 aa8.88□□□□□ -0.99
PTPN4-204ENST00000431283 FAM170BA6NMN3 283 aa8.87□□□□□ -0.99
PTPN4-204ENST00000431283 ID3Q02535 119 aa8.87□□□□□ -0.99
PTPN4-204ENST00000431283 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.87□□□□□ -0.99
PTPN4-204ENST00000431283 PI16Q6UXB8 463 aa8.87□□□□□ -0.99
PTPN4-204ENST00000431283 KCNB2Q92953 911 aa8.87□□□□□ -0.99
PTPN4-204ENST00000431283 CCDC86Q9H6F5 360 aaKnown RBP8.87□□□□□ -0.99
PTPN4-204ENST00000431283 LGR6Q9HBX8 967 aa8.87□□□□□ -0.99
PTPN4-204ENST00000431283 COL17A1Q9UMD9 1497 aaPredicted RBP8.87□□□□□ -0.99
PTPN4-204ENST00000431283 KRT82Q9NSB4 513 aa8.86□□□□□ -0.99
PTPN4-204ENST00000431283 BSDC1Q9NW68 430 aaPredicted RBP8.86□□□□□ -0.99
PTPN4-204ENST00000431283 PPP1R9AQ9ULJ8 1098 aa8.86□□□□□ -0.99
PTPN4-204ENST00000431283 TREHO43280 583 aa8.85□□□□□ -0.99
PTPN4-204ENST00000431283 MAPK8P45983 427 aa8.85□□□□□ -0.99
PTPN4-204ENST00000431283 ENOX2Q16206 610 aaKnown RBP8.85□□□□□ -0.99
PTPN4-204ENST00000431283 NXPE4Q6UWF7 544 aa8.85□□□□□ -0.99
PTPN4-204ENST00000431283 VSIG10LQ86VR7 867 aa8.85□□□□□ -0.99
PTPN4-204ENST00000431283 FBXL18Q96ME1 805 aa8.85□□□□□ -0.99
PTPN4-204ENST00000431283 GSX1Q9H4S2 264 aaPredicted RBP8.85□□□□□ -0.99
PTPN4-204ENST00000431283 RNGTTO60942 597 aaKnown RBP8.84□□□□□ -0.99
PTPN4-204ENST00000431283 ADAMTS4O75173 837 aa8.84□□□□□ -0.99
PTPN4-204ENST00000431283 ATP2B2Q01814 1243 aa8.84□□□□□ -0.99
PTPN4-204ENST00000431283 DSC3Q14574 896 aa8.84□□□□□ -0.99
PTPN4-204ENST00000431283 MSMPQ1L6U9 139 aa8.84□□□□□ -0.99
PTPN4-204ENST00000431283 CYP27C1Q4G0S4 372 aa8.84□□□□□ -0.99
PTPN4-204ENST00000431283 ZNF765Q7L2R6 523 aa8.84□□□□□ -0.99
PTPN4-204ENST00000431283 SULF2Q8IWU5 870 aa8.84□□□□□ -0.99
PTPN4-204ENST00000431283 SHISA5Q8N114 240 aa8.84□□□□□ -0.99
PTPN4-204ENST00000431283 EMILIN2Q9BXX0 1053 aa8.84□□□□□ -0.99
PTPN4-204ENST00000431283 CRIM1Q9NZV1 1036 aa8.84□□□□□ -0.99
PTPN4-204ENST00000431283 SAMM50Q9Y512 469 aa8.84□□□□□ -0.99
PTPN4-204ENST00000431283 IVNS1ABPQ9Y6Y0 642 aa8.84□□□□□ -0.99
PTPN4-204ENST00000431283 TMPRSS2O15393 492 aa8.83□□□□□ -1
PTPN4-204ENST00000431283 TAL1P17542 331 aaPredicted RBP8.83□□□□□ -1
PTPN4-204ENST00000431283 KCNA1Q09470 495 aa8.83□□□□□ -1
PTPN4-204ENST00000431283 TP53INP2Q8IXH6 220 aa8.83□□□□□ -1
PTPN4-204ENST00000431283 FBF1Q8TES7 1133 aa8.83□□□□□ -1
PTPN4-204ENST00000431283 WDR89Q96FK6 387 aaPredicted RBP8.83□□□□□ -1
PTPN4-204ENST00000431283 ACSBG1Q96GR2 724 aa8.83□□□□□ -1
PTPN4-204ENST00000431283 CBX8Q9HC52 389 aa8.83□□□□□ -1
PTPN4-204ENST00000431283 SSU72Q9NP77 194 aaKnown RBP8.83□□□□□ -1
PTPN4-204ENST00000431283 CCDC39Q9UFE4 941 aa8.83□□□□□ -1
PTPN4-204ENST00000431283 ARNTP27540 789 aa8.82□□□□□ -1
PTPN4-204ENST00000431283 GSTT1P30711 240 aa8.82□□□□□ -1
PTPN4-204ENST00000431283 KIF4BQ2VIQ3 1234 aa8.82□□□□□ -1
PTPN4-204ENST00000431283 OGFOD3Q6PK18 319 aa8.82□□□□□ -1
PTPN4-204ENST00000431283 SMYD4Q8IYR2 804 aaPredicted RBP8.82□□□□□ -1
PTPN4-204ENST00000431283 GATA6Q92908 595 aa8.82□□□□□ -1
PTPN4-204ENST00000431283 FANCD2OSQ96PS1 177 aa8.82□□□□□ -1
PTPN4-204ENST00000431283 SRCIN1Q9C0H9 1055 aa8.82□□□□□ -1
PTPN4-204ENST00000431283 ZNF862O60290 1169 aa8.81□□□□□ -1
PTPN4-204ENST00000431283 PRNPP04156 253 aa8.81□□□□□ -1
PTPN4-204ENST00000431283 MAP1SQ66K74 1059 aaPredicted RBP8.81□□□□□ -1
PTPN4-204ENST00000431283 ALG1LQ6GMV1 187 aa8.81□□□□□ -1
PTPN4-204ENST00000431283 CEP44Q9C0F1 390 aa8.81□□□□□ -1
PTPN4-204ENST00000431283 C1GALT1Q9NS00 363 aa8.81□□□□□ -1
PTPN4-204ENST00000431283 PATL2C9JE40 543 aaKnown RBP8.8□□□□□ -1
PTPN4-204ENST00000431283 DYNC1LI2O43237 492 aaPredicted RBP8.8□□□□□ -1
PTPN4-204ENST00000431283 NME2P22392 152 aa8.8□□□□□ -1
PTPN4-204ENST00000431283 FLCNQ8NFG4 579 aa8.8□□□□□ -1
PTPN4-204ENST00000431283 PICK1Q9NRD5 415 aa8.8□□□□□ -1
PTPN4-204ENST00000431283 GIPC1O14908 333 aa8.79□□□□□ -1
PTPN4-204ENST00000431283 HCLS1P14317 486 aaPredicted RBP8.79□□□□□ -1
PTPN4-204ENST00000431283 TXKP42681 527 aa8.79□□□□□ -1
PTPN4-204ENST00000431283 TTLL4Q14679 1199 aa8.79□□□□□ -1
PTPN4-204ENST00000431283 SEZ6L2Q6UXD5 910 aa8.79□□□□□ -1
PTPN4-204ENST00000431283 TPTE2Q6XPS3 522 aa8.79□□□□□ -1
PTPN4-204ENST00000431283 ARHGAP27Q6ZUM4 889 aa8.79□□□□□ -1
PTPN4-204ENST00000431283 AGBL5Q8NDL9 886 aa8.79□□□□□ -1
PTPN4-204ENST00000431283 DISC1Q9NRI5 854 aa8.79□□□□□ -1
PTPN4-204ENST00000431283 ZC3H7BQ9UGR2 993 aaKnown RBP8.79□□□□□ -1
PTPN4-204ENST00000431283 SPG7Q9UQ90 795 aa8.79□□□□□ -1
PTPN4-204ENST00000431283 FAM87AP0C7U9 286 aa8.78□□□□□ -1
PTPN4-204ENST00000431283 CDK5R2Q13319 367 aa8.78□□□□□ -1
PTPN4-204ENST00000431283 ABI1Q8IZP0 508 aa8.78□□□□□ -1
PTPN4-204ENST00000431283 ASB16Q96NS5 453 aa8.78□□□□□ -1
PTPN4-204ENST00000431283 PCOLCE2Q9UKZ9 415 aa8.78□□□□□ -1
PTPN4-204ENST00000431283 PPM1HQ9ULR3 514 aa8.78□□□□□ -1
PTPN4-204ENST00000431283 PDZD3Q86UT5 571 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms