RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 ADGRA1Q86SQ6 560 aa16.32■□□□□ 0.2
HOXC4-202ENST00000430889 MTA3Q9BTC8 594 aa16.32■□□□□ 0.2
HOXC4-202ENST00000430889 NYXQ9GZU5 481 aa16.32■□□□□ 0.2
HOXC4-202ENST00000430889 RTEL1Q9NZ71 1219 aa16.32■□□□□ 0.2
HOXC4-202ENST00000430889 CCDC39Q9UFE4 941 aa16.32■□□□□ 0.2
HOXC4-202ENST00000430889 PDS5AQ29RF7 1337 aaKnown RBP16.32■□□□□ 0.2
HOXC4-202ENST00000430889 BAZ2AQ9UIF9 1905 aaKnown RBP16.31■□□□□ 0.2
HOXC4-202ENST00000430889 GOLGA6L4A6NEF3 574 aa16.31■□□□□ 0.2
HOXC4-202ENST00000430889 KDM4AO75164 1064 aa16.31■□□□□ 0.2
HOXC4-202ENST00000430889 GYG1P46976 350 aa16.31■□□□□ 0.2
HOXC4-202ENST00000430889 CTDSPL2Q05D32 466 aa16.31■□□□□ 0.2
HOXC4-202ENST00000430889 FBXO33Q7Z6M2 555 aa16.31■□□□□ 0.2
HOXC4-202ENST00000430889 ENGASEQ8NFI3 743 aa16.31■□□□□ 0.2
HOXC4-202ENST00000430889 C8orf76Q96K31 380 aa16.31■□□□□ 0.2
HOXC4-202ENST00000430889 FAM84BQ96KN1 310 aaPredicted RBP16.31■□□□□ 0.2
HOXC4-202ENST00000430889 TNMDQ9H2S6 317 aa16.31■□□□□ 0.2
HOXC4-202ENST00000430889 CNNM2Q9H8M5 875 aa16.31■□□□□ 0.2
HOXC4-202ENST00000430889 INCENPQ9NQS7 918 aa16.31■□□□□ 0.2
HOXC4-202ENST00000430889 USP21Q9UK80 565 aa16.31■□□□□ 0.2
HOXC4-202ENST00000430889 LAMB1P07942 1786 aa16.31■□□□□ 0.2
HOXC4-202ENST00000430889 CDC27P30260 824 aa16.3■□□□□ 0.2
HOXC4-202ENST00000430889 OTUD7BQ6GQQ9 843 aa16.3■□□□□ 0.2
HOXC4-202ENST00000430889 RAB11FIP4Q86YS3 637 aa16.3■□□□□ 0.2
HOXC4-202ENST00000430889 ZNF384Q8TF68 577 aa16.3■□□□□ 0.2
HOXC4-202ENST00000430889 RIOK1Q9BRS2 568 aaKnown RBP16.3■□□□□ 0.2
HOXC4-202ENST00000430889 GOLPH3LQ9H4A5 285 aa16.3■□□□□ 0.2
HOXC4-202ENST00000430889 DUOX1Q9NRD9 1551 aa16.3■□□□□ 0.2
HOXC4-202ENST00000430889 ZSWIM5Q9P217 1185 aa16.3■□□□□ 0.2
HOXC4-202ENST00000430889 USP25Q9UHP3 1055 aa16.3■□□□□ 0.2
HOXC4-202ENST00000430889 ZKSCAN5Q9Y2L8 839 aa16.3■□□□□ 0.2
HOXC4-202ENST00000430889 IRS2Q9Y4H2 1338 aa16.3■□□□□ 0.2
HOXC4-202ENST00000430889 CCDC88AQ3V6T2 1871 aa16.3■□□□□ 0.2
HOXC4-202ENST00000430889 UBR3Q6ZT12 1888 aa16.3■□□□□ 0.2
HOXC4-202ENST00000430889 AP5Z1O43299 807 aa16.3■□□□□ 0.2
HOXC4-202ENST00000430889 ZNF500O60304 480 aaPredicted RBP16.3■□□□□ 0.2
HOXC4-202ENST00000430889 TM4SF1P30408 202 aa16.3■□□□□ 0.2
HOXC4-202ENST00000430889 METAP2P50579 478 aaKnown RBP eCLIP16.3■□□□□ 0.2
HOXC4-202ENST00000430889 KIF23Q02241 960 aaPredicted RBP16.3■□□□□ 0.2
HOXC4-202ENST00000430889 SNW1Q13573 536 aaKnown RBP16.3■□□□□ 0.2
HOXC4-202ENST00000430889 CAMK4Q16566 473 aa16.3■□□□□ 0.2
HOXC4-202ENST00000430889 BRAPQ7Z569 592 aa16.3■□□□□ 0.2
HOXC4-202ENST00000430889 BICD2Q8TD16 824 aa16.3■□□□□ 0.2
HOXC4-202ENST00000430889 GNL3LQ9NVN8 582 aaKnown RBP16.3■□□□□ 0.2
HOXC4-202ENST00000430889 LRP2BPQ9P2M1 347 aa16.3■□□□□ 0.2
HOXC4-202ENST00000430889 ANAPC4Q9UJX5 808 aa16.3■□□□□ 0.2
HOXC4-202ENST00000430889 SLC4A4Q9Y6R1 1079 aa16.3■□□□□ 0.2
HOXC4-202ENST00000430889 STK36Q9NRP7 1315 aa16.29■□□□□ 0.2
HOXC4-202ENST00000430889 MYH2Q9UKX2 1941 aa16.29■□□□□ 0.2
HOXC4-202ENST00000430889 KIF28PB7ZC32 967 aa16.29■□□□□ 0.2
HOXC4-202ENST00000430889 CPLX1O14810 134 aa16.29■□□□□ 0.2
HOXC4-202ENST00000430889 SEMA3EO15041 775 aa16.29■□□□□ 0.2
HOXC4-202ENST00000430889 GNPATO15228 680 aa16.29■□□□□ 0.2
HOXC4-202ENST00000430889 CYP7A1P22680 504 aa16.29■□□□□ 0.2
HOXC4-202ENST00000430889 BICDL1Q6ZP65 573 aa16.29■□□□□ 0.2
HOXC4-202ENST00000430889 LINC00301Q8NCQ3 95 aa16.29■□□□□ 0.2
HOXC4-202ENST00000430889 FAM200AQ8TCP9 573 aa16.29■□□□□ 0.2
HOXC4-202ENST00000430889 KRT23Q9C075 422 aa16.29■□□□□ 0.2
HOXC4-202ENST00000430889 POLR3EQ9NVU0 708 aa16.29■□□□□ 0.2
HOXC4-202ENST00000430889 CCNL1Q9UK58 526 aaPredicted RBP16.29■□□□□ 0.2
HOXC4-202ENST00000430889 ZBTB43O43298 467 aa16.28■□□□□ 0.2
HOXC4-202ENST00000430889 ONECUT3O60422 494 aaPredicted RBP16.28■□□□□ 0.2
HOXC4-202ENST00000430889 RANBP6O60518 1105 aaKnown RBP16.28■□□□□ 0.2
HOXC4-202ENST00000430889 YEATS4O95619 227 aa16.28■□□□□ 0.2
HOXC4-202ENST00000430889 ADCY5O95622 1261 aa16.28■□□□□ 0.2
HOXC4-202ENST00000430889 RPS8P62241 208 aaKnown RBP16.28■□□□□ 0.2
HOXC4-202ENST00000430889 TMEM67Q5HYA8 995 aa16.28■□□□□ 0.2
HOXC4-202ENST00000430889 MYSM1Q5VVJ2 828 aa16.28■□□□□ 0.2
HOXC4-202ENST00000430889 SETDB2Q96T68 719 aa16.28■□□□□ 0.2
HOXC4-202ENST00000430889 NACAP1Q9BZK3 213 aa16.28■□□□□ 0.2
HOXC4-202ENST00000430889 IQSEC3Q9UPP2 1182 aaPredicted RBP16.28■□□□□ 0.2
HOXC4-202ENST00000430889 A0A1W2PQ27 194 aa16.27■□□□□ 0.2
HOXC4-202ENST00000430889 A0A1W2PQ64 194 aa16.27■□□□□ 0.2
HOXC4-202ENST00000430889 A0A1W2PQD8 194 aa16.27■□□□□ 0.2
HOXC4-202ENST00000430889 CDKL5O76039 1030 aa16.27■□□□□ 0.2
HOXC4-202ENST00000430889 CEBPZQ03701 1054 aaKnown RBP16.27■□□□□ 0.2
HOXC4-202ENST00000430889 CCAR1Q8IX12 1150 aaKnown RBP16.27■□□□□ 0.2
HOXC4-202ENST00000430889 CKAP2LQ8IYA6 745 aa16.27■□□□□ 0.2
HOXC4-202ENST00000430889 MIGA1Q8NAN2 632 aa16.27■□□□□ 0.2
HOXC4-202ENST00000430889 ARHGEF1Q92888 912 aaKnown RBP16.27■□□□□ 0.2
HOXC4-202ENST00000430889 GJB4Q9NTQ9 266 aa16.27■□□□□ 0.2
HOXC4-202ENST00000430889 KLRK1P26718 216 aa16.27■□□□□ 0.19
HOXC4-202ENST00000430889 TDO2P48775 406 aa16.27■□□□□ 0.19
HOXC4-202ENST00000430889 RCAN1P53805 252 aa16.27■□□□□ 0.19
HOXC4-202ENST00000430889 CAVIN4Q5BKX8 364 aa16.27■□□□□ 0.19
HOXC4-202ENST00000430889 MFSD6Q6ZSS7 791 aa16.27■□□□□ 0.19
HOXC4-202ENST00000430889 NBPF5PQ86XG9 351 aaPredicted RBP16.27■□□□□ 0.19
HOXC4-202ENST00000430889 AIFM3Q96NN9 605 aa16.27■□□□□ 0.19
HOXC4-202ENST00000430889 NLRP3Q96P20 1036 aa16.27■□□□□ 0.19
HOXC4-202ENST00000430889 PCDHA7Q9UN72 937 aa16.27■□□□□ 0.19
HOXC4-202ENST00000430889 RTCBQ9Y3I0 505 aaKnown RBP16.27■□□□□ 0.19
HOXC4-202ENST00000430889 MYH6P13533 1939 aa16.26■□□□□ 0.19
HOXC4-202ENST00000430889 MAGEB6P1A0A0J9YX57 407 aa16.26■□□□□ 0.19
HOXC4-202ENST00000430889 GOLGA8AA7E2F4 631 aa16.26■□□□□ 0.19
HOXC4-202ENST00000430889 CTAGE5O15320 804 aa16.26■□□□□ 0.19
HOXC4-202ENST00000430889 ZPR1O75312 459 aa16.26■□□□□ 0.19
HOXC4-202ENST00000430889 RXRAP19793 462 aa16.26■□□□□ 0.19
HOXC4-202ENST00000430889 FAM160A1Q05DH4 1040 aa16.26■□□□□ 0.19
HOXC4-202ENST00000430889 PPARAQ07869 468 aa16.26■□□□□ 0.19
HOXC4-202ENST00000430889 ADALQ6DHV7 355 aa16.26■□□□□ 0.19
HOXC4-202ENST00000430889 CLIC4Q9Y696 253 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms