RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.8□□□□□ -0.36
ATG4B-212ENST00000430617 LTBP2Q14767 1821 aa12.8□□□□□ -0.36
ATG4B-212ENST00000430617 ZNF853P0CG23 659 aa12.79□□□□□ -0.36
ATG4B-212ENST00000430617 CALD1Q05682 793 aaKnown RBP12.79□□□□□ -0.36
ATG4B-212ENST00000430617 PPIL2Q13356 520 aa12.79□□□□□ -0.36
ATG4B-212ENST00000430617 MOGSQ13724 837 aa12.79□□□□□ -0.36
ATG4B-212ENST00000430617 FAM109BQ6ICB4 259 aaPredicted RBP12.79□□□□□ -0.36
ATG4B-212ENST00000430617 IFT57Q9NWB7 429 aa12.79□□□□□ -0.36
ATG4B-212ENST00000430617 LAS1LQ9Y4W2 734 aaKnown RBP12.79□□□□□ -0.36
ATG4B-212ENST00000430617 MAST2Q6P0Q8 1798 aa12.79□□□□□ -0.36
ATG4B-212ENST00000430617 BCRP11274 1271 aa12.78□□□□□ -0.36
ATG4B-212ENST00000430617 IL1R1P14778 569 aa12.78□□□□□ -0.36
ATG4B-212ENST00000430617 FLT3LGP49771 235 aa12.78□□□□□ -0.36
ATG4B-212ENST00000430617 FCGRTP55899 365 aa12.78□□□□□ -0.36
ATG4B-212ENST00000430617 ANKRD23Q86SG2 305 aa12.78□□□□□ -0.36
ATG4B-212ENST00000430617 WRNIP1Q96S55 665 aa12.78□□□□□ -0.36
ATG4B-212ENST00000430617 ANKRD2Q9GZV1 360 aa12.78□□□□□ -0.36
ATG4B-212ENST00000430617 MYH16Q9H6N6 1097 aa12.78□□□□□ -0.36
ATG4B-212ENST00000430617 TAF5LO75529 589 aa12.77□□□□□ -0.37
ATG4B-212ENST00000430617 HOXB7P09629 217 aa12.77□□□□□ -0.37
ATG4B-212ENST00000430617 PLA2G5P39877 138 aa12.77□□□□□ -0.37
ATG4B-212ENST00000430617 KCNJ4P48050 445 aa12.77□□□□□ -0.37
ATG4B-212ENST00000430617 FKBP1AP62942 108 aaKnown RBP12.77□□□□□ -0.37
ATG4B-212ENST00000430617 CHRNDQ07001 517 aa12.77□□□□□ -0.37
ATG4B-212ENST00000430617 METTL22Q9BUU2 404 aaPredicted RBP12.77□□□□□ -0.37
ATG4B-212ENST00000430617 MYH13Q9UKX3 1938 aa12.77□□□□□ -0.37
ATG4B-212ENST00000430617 NCOR1O75376 2440 aa12.77□□□□□ -0.37
ATG4B-212ENST00000430617 IGKV5-2P06315 115 aa12.76□□□□□ -0.37
ATG4B-212ENST00000430617 CYP2C8P10632 490 aa12.76□□□□□ -0.37
ATG4B-212ENST00000430617 IGHMBP2P38935 993 aaKnown RBP12.76□□□□□ -0.37
ATG4B-212ENST00000430617 CACNB3P54284 484 aa12.76□□□□□ -0.37
ATG4B-212ENST00000430617 DZIP1LQ8IYY4 767 aaKnown RBP12.76□□□□□ -0.37
ATG4B-212ENST00000430617 MAFAQ8NHW3 353 aaPredicted RBP12.76□□□□□ -0.37
ATG4B-212ENST00000430617 PXYLP1Q8TE99 480 aa12.76□□□□□ -0.37
ATG4B-212ENST00000430617 TSR2Q969E8 191 aaKnown RBP12.76□□□□□ -0.37
ATG4B-212ENST00000430617 CDX2Q99626 313 aaPredicted RBP12.76□□□□□ -0.37
ATG4B-212ENST00000430617 CAPN2P17655 700 aa12.75□□□□□ -0.37
ATG4B-212ENST00000430617 ITGA6P23229 1130 aa12.75□□□□□ -0.37
ATG4B-212ENST00000430617 GNAI1P63096 354 aa12.75□□□□□ -0.37
ATG4B-212ENST00000430617 MDM2Q00987 491 aaPredicted RBP12.75□□□□□ -0.37
ATG4B-212ENST00000430617 PPATQ06203 517 aa12.75□□□□□ -0.37
ATG4B-212ENST00000430617 FAM205AQ6ZU69 1335 aa12.75□□□□□ -0.37
ATG4B-212ENST00000430617 C15orf52Q6ZUT6 534 aaKnown RBP12.75□□□□□ -0.37
ATG4B-212ENST00000430617 DOCK2Q92608 1830 aa12.75□□□□□ -0.37
ATG4B-212ENST00000430617 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.75□□□□□ -0.379e-8■■■□□ 15.9
ATG4B-212ENST00000430617 TTF2Q9UNY4 1162 aaKnown RBP12.75□□□□□ -0.37
ATG4B-212ENST00000430617 INPP5BP32019 993 aa12.74□□□□□ -0.37
ATG4B-212ENST00000430617 GPAT2Q6NUI2 795 aa12.74□□□□□ -0.37
ATG4B-212ENST00000430617 ANKLE1Q8NAG6 615 aa12.74□□□□□ -0.37
ATG4B-212ENST00000430617 NBPF3Q9H094 633 aa12.74□□□□□ -0.37
ATG4B-212ENST00000430617 MBIPQ9NS73 344 aa12.74□□□□□ -0.37
ATG4B-212ENST00000430617 SERPINA10Q9UK55 444 aa12.74□□□□□ -0.37
ATG4B-212ENST00000430617 KCNH4Q9UQ05 1017 aa12.74□□□□□ -0.37
ATG4B-212ENST00000430617 PFASO15067 1338 aa12.73□□□□□ -0.37
ATG4B-212ENST00000430617 TNNI2P48788 182 aa12.73□□□□□ -0.37
ATG4B-212ENST00000430617 IRF5Q13568 498 aa12.73□□□□□ -0.37
ATG4B-212ENST00000430617 GRIK5Q16478 980 aa12.73□□□□□ -0.37
ATG4B-212ENST00000430617 ZNF804AQ7Z570 1209 aa12.73□□□□□ -0.37
ATG4B-212ENST00000430617 MPHOSPH8Q99549 860 aa12.73□□□□□ -0.37
ATG4B-212ENST00000430617 C11orf49Q9H6J7 331 aa12.73□□□□□ -0.37
ATG4B-212ENST00000430617 TAOK2Q9UL54 1235 aa12.73□□□□□ -0.37
ATG4B-212ENST00000430617 MAP3K2Q9Y2U5 619 aa12.73□□□□□ -0.37
ATG4B-212ENST00000430617 TCF20Q9UGU0 1960 aaKnown RBP12.72□□□□□ -0.37
ATG4B-212ENST00000430617 DOCK1Q14185 1865 aa12.72□□□□□ -0.37
ATG4B-212ENST00000430617 BDP1A6H8Y1 2624 aa12.72□□□□□ -0.37
ATG4B-212ENST00000430617 CRKP46108 304 aa12.72□□□□□ -0.37
ATG4B-212ENST00000430617 TRIM32Q13049 653 aa12.72□□□□□ -0.37
ATG4B-212ENST00000430617 CWF19L2Q2TBE0 894 aaKnown RBP12.72□□□□□ -0.37
ATG4B-212ENST00000430617 MFSD14BQ5SR56 506 aa12.72□□□□□ -0.37
ATG4B-212ENST00000430617 ZNF697Q5TEC3 545 aa12.72□□□□□ -0.37
ATG4B-212ENST00000430617 MIGA2Q7L4E1 593 aa12.72□□□□□ -0.37
ATG4B-212ENST00000430617 SYMPKQ92797 1274 aaKnown RBP12.72□□□□□ -0.37
ATG4B-212ENST00000430617 FAM122AQ96E09 287 aa12.72□□□□□ -0.37
ATG4B-212ENST00000430617 PARK7Q99497 189 aaKnown RBP12.72□□□□□ -0.37
ATG4B-212ENST00000430617 RCAN3Q9UKA8 241 aa12.72□□□□□ -0.37
ATG4B-212ENST00000430617 MYO9BQ13459 2157 aa12.71□□□□□ -0.37
ATG4B-212ENST00000430617 TNFRSF10AO00220 468 aa12.71□□□□□ -0.37
ATG4B-212ENST00000430617 TNPO2O14787 897 aaKnown RBP12.71□□□□□ -0.37
ATG4B-212ENST00000430617 CT47B1P0C2W7 299 aaPredicted RBP12.71□□□□□ -0.37
ATG4B-212ENST00000430617 HOXD11P31277 338 aaPredicted RBP12.71□□□□□ -0.37
ATG4B-212ENST00000430617 EXOSC9Q06265 439 aaKnown RBP12.71□□□□□ -0.37
ATG4B-212ENST00000430617 UBE3BQ7Z3V4 1068 aa12.71□□□□□ -0.37
ATG4B-212ENST00000430617 MYLIPQ8WY64 445 aa12.71□□□□□ -0.37
ATG4B-212ENST00000430617 ATAD5Q96QE3 1844 aa12.71□□□□□ -0.38
ATG4B-212ENST00000430617 RLFQ13129 1914 aa12.7□□□□□ -0.38
ATG4B-212ENST00000430617 H7C1W4 665 aa12.7□□□□□ -0.38
ATG4B-212ENST00000430617 ELL2O00472 640 aaPredicted RBP12.7□□□□□ -0.38
ATG4B-212ENST00000430617 SEMA6BQ9H3T3 888 aa12.7□□□□□ -0.38
ATG4B-212ENST00000430617 REV3LO60673 3130 aa12.69□□□□□ -0.38
ATG4B-212ENST00000430617 CSF1RP07333 972 aa12.69□□□□□ -0.38
ATG4B-212ENST00000430617 ZNF341Q9BYN7 854 aa12.69□□□□□ -0.38
ATG4B-212ENST00000430617 SUPT16HQ9Y5B9 1047 aaKnown RBP12.69□□□□□ -0.38
ATG4B-212ENST00000430617 CACNA1FO60840 1977 aa12.69□□□□□ -0.38
ATG4B-212ENST00000430617 LOC285556D6RIA3 1793 aa12.69□□□□□ -0.38
ATG4B-212ENST00000430617 TMEM265A0A087WTH1 108 aa12.68□□□□□ -0.38
ATG4B-212ENST00000430617 PI4KAP2A4QPH2 592 aa12.68□□□□□ -0.38
ATG4B-212ENST00000430617 NEURL1BA8MQ27 555 aa12.68□□□□□ -0.38
ATG4B-212ENST00000430617 CASP7P55210 303 aa12.68□□□□□ -0.38
ATG4B-212ENST00000430617 LRRC26Q2I0M4 334 aa12.68□□□□□ -0.38
ATG4B-212ENST00000430617 PI4KAP1Q8N8J0 262 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms