RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 ZKSCAN4Q969J2 545 aaPredicted RBP12.82□□□□□ -0.36
ATG4B-211ENST00000429899 CRISPLD2Q9H0B8 497 aa12.82□□□□□ -0.36
ATG4B-211ENST00000429899 TDRD3Q9H7E2 651 aaKnown RBP12.82□□□□□ -0.36
ATG4B-211ENST00000429899 PAK6Q9NQU5 681 aaPredicted RBP12.82□□□□□ -0.36
ATG4B-211ENST00000429899 HYPKQ9NX55 129 aa12.82□□□□□ -0.36
ATG4B-211ENST00000429899 PLXNB2O15031 1838 aa12.82□□□□□ -0.36
ATG4B-211ENST00000429899 FRMPD3Q5JV73 1810 aa12.82□□□□□ -0.36
ATG4B-211ENST00000429899 FAM205AQ6ZU69 1335 aa12.82□□□□□ -0.36
ATG4B-211ENST00000429899 PHIPQ8WWQ0 1821 aa12.81□□□□□ -0.36
ATG4B-211ENST00000429899 TCP10L2B9ZVM9 353 aa12.81□□□□□ -0.36
ATG4B-211ENST00000429899 CHL1O00533 1208 aa12.81□□□□□ -0.36
ATG4B-211ENST00000429899 CAPN2P17655 700 aa12.81□□□□□ -0.36
ATG4B-211ENST00000429899 CWC25Q9NXE8 425 aaPredicted RBP12.81□□□□□ -0.36
ATG4B-211ENST00000429899 TAOK2Q9UL54 1235 aa12.81□□□□□ -0.36
ATG4B-211ENST00000429899 NCOR1O75376 2440 aa12.81□□□□□ -0.36
ATG4B-211ENST00000429899 FANCIQ9NVI1 1328 aa12.81□□□□□ -0.36
ATG4B-211ENST00000429899 BDP1A6H8Y1 2624 aa12.8□□□□□ -0.36
ATG4B-211ENST00000429899 PDHXO00330 501 aa12.8□□□□□ -0.36
ATG4B-211ENST00000429899 FLT3LGP49771 235 aa12.8□□□□□ -0.36
ATG4B-211ENST00000429899 TNFAIP1Q13829 316 aa12.8□□□□□ -0.36
ATG4B-211ENST00000429899 TJAP1Q5JTD0 557 aa12.8□□□□□ -0.36
ATG4B-211ENST00000429899 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.8□□□□□ -0.36
ATG4B-211ENST00000429899 NBPF3Q9H094 633 aa12.8□□□□□ -0.36
ATG4B-211ENST00000429899 LTBP2Q14767 1821 aa12.8□□□□□ -0.36
ATG4B-211ENST00000429899 ZNF853P0CG23 659 aa12.79□□□□□ -0.36
ATG4B-211ENST00000429899 CALD1Q05682 793 aaKnown RBP12.79□□□□□ -0.36
ATG4B-211ENST00000429899 PPIL2Q13356 520 aa12.79□□□□□ -0.36
ATG4B-211ENST00000429899 MOGSQ13724 837 aa12.79□□□□□ -0.36
ATG4B-211ENST00000429899 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.79□□□□□ -0.365e-8■■■□□ 15.3
ATG4B-211ENST00000429899 C11orf49Q9H6J7 331 aa12.79□□□□□ -0.36
ATG4B-211ENST00000429899 IFT57Q9NWB7 429 aa12.79□□□□□ -0.36
ATG4B-211ENST00000429899 LAS1LQ9Y4W2 734 aaKnown RBP12.79□□□□□ -0.36
ATG4B-211ENST00000429899 MAST2Q6P0Q8 1798 aa12.79□□□□□ -0.36
ATG4B-211ENST00000429899 BCRP11274 1271 aa12.78□□□□□ -0.36
ATG4B-211ENST00000429899 IL1R1P14778 569 aa12.78□□□□□ -0.36
ATG4B-211ENST00000429899 FOSL2P15408 326 aa12.78□□□□□ -0.36
ATG4B-211ENST00000429899 ANKRD23Q86SG2 305 aa12.78□□□□□ -0.36
ATG4B-211ENST00000429899 ANKLE1Q8NAG6 615 aa12.78□□□□□ -0.36
ATG4B-211ENST00000429899 PXYLP1Q8TE99 480 aa12.78□□□□□ -0.36
ATG4B-211ENST00000429899 WRNIP1Q96S55 665 aa12.78□□□□□ -0.36
ATG4B-211ENST00000429899 ANKRD2Q9GZV1 360 aa12.78□□□□□ -0.36
ATG4B-211ENST00000429899 SEMA6BQ9H3T3 888 aa12.78□□□□□ -0.36
ATG4B-211ENST00000429899 MYH16Q9H6N6 1097 aa12.78□□□□□ -0.36
ATG4B-211ENST00000429899 TAF5LO75529 589 aa12.77□□□□□ -0.37
ATG4B-211ENST00000429899 HOXB7P09629 217 aa12.77□□□□□ -0.37
ATG4B-211ENST00000429899 KCNJ4P48050 445 aa12.77□□□□□ -0.37
ATG4B-211ENST00000429899 FKBP1AP62942 108 aaKnown RBP12.77□□□□□ -0.37
ATG4B-211ENST00000429899 CHRNDQ07001 517 aa12.77□□□□□ -0.37
ATG4B-211ENST00000429899 METTL22Q9BUU2 404 aaPredicted RBP12.77□□□□□ -0.37
ATG4B-211ENST00000429899 MYH13Q9UKX3 1938 aa12.77□□□□□ -0.37
ATG4B-211ENST00000429899 IGKV5-2P06315 115 aa12.76□□□□□ -0.37
ATG4B-211ENST00000429899 CYP2C8P10632 490 aa12.76□□□□□ -0.37
ATG4B-211ENST00000429899 IGHMBP2P38935 993 aaKnown RBP12.76□□□□□ -0.37
ATG4B-211ENST00000429899 CACNB3P54284 484 aa12.76□□□□□ -0.37
ATG4B-211ENST00000429899 DZIP1LQ8IYY4 767 aaKnown RBP12.76□□□□□ -0.37
ATG4B-211ENST00000429899 TSR2Q969E8 191 aaKnown RBP12.76□□□□□ -0.37
ATG4B-211ENST00000429899 TNPO2O14787 897 aaKnown RBP12.75□□□□□ -0.37
ATG4B-211ENST00000429899 ITGA6P23229 1130 aa12.75□□□□□ -0.37
ATG4B-211ENST00000429899 GNAI1P63096 354 aa12.75□□□□□ -0.37
ATG4B-211ENST00000429899 PPATQ06203 517 aa12.75□□□□□ -0.37
ATG4B-211ENST00000429899 C15orf52Q6ZUT6 534 aaKnown RBP12.75□□□□□ -0.37
ATG4B-211ENST00000429899 DOCK2Q92608 1830 aa12.75□□□□□ -0.37
ATG4B-211ENST00000429899 TTF2Q9UNY4 1162 aaKnown RBP12.75□□□□□ -0.37
ATG4B-211ENST00000429899 INPP5BP32019 993 aa12.74□□□□□ -0.37
ATG4B-211ENST00000429899 TNNI2P48788 182 aa12.74□□□□□ -0.37
ATG4B-211ENST00000429899 IRF5Q13568 498 aa12.74□□□□□ -0.37
ATG4B-211ENST00000429899 GPAT2Q6NUI2 795 aa12.74□□□□□ -0.37
ATG4B-211ENST00000429899 PARK7Q99497 189 aaKnown RBP12.74□□□□□ -0.37
ATG4B-211ENST00000429899 TTYH1Q9H313 450 aaPredicted RBP12.74□□□□□ -0.37
ATG4B-211ENST00000429899 MBIPQ9NS73 344 aa12.74□□□□□ -0.37
ATG4B-211ENST00000429899 SERPINA10Q9UK55 444 aa12.74□□□□□ -0.37
ATG4B-211ENST00000429899 KCNH4Q9UQ05 1017 aa12.74□□□□□ -0.37
ATG4B-211ENST00000429899 PFASO15067 1338 aa12.73□□□□□ -0.37
ATG4B-211ENST00000429899 GRIK5Q16478 980 aa12.73□□□□□ -0.37
ATG4B-211ENST00000429899 ZNF804AQ7Z570 1209 aa12.73□□□□□ -0.37
ATG4B-211ENST00000429899 USP38Q8NB14 1042 aa12.73□□□□□ -0.37
ATG4B-211ENST00000429899 MPHOSPH8Q99549 860 aa12.73□□□□□ -0.37
ATG4B-211ENST00000429899 MAP3K2Q9Y2U5 619 aa12.73□□□□□ -0.37
ATG4B-211ENST00000429899 TCF20Q9UGU0 1960 aaKnown RBP12.72□□□□□ -0.37
ATG4B-211ENST00000429899 DOCK1Q14185 1865 aa12.72□□□□□ -0.37
ATG4B-211ENST00000429899 SYNGAP1Q96PV0 1343 aa12.72□□□□□ -0.37
ATG4B-211ENST00000429899 CRKP46108 304 aa12.72□□□□□ -0.37
ATG4B-211ENST00000429899 TRIM32Q13049 653 aa12.72□□□□□ -0.37
ATG4B-211ENST00000429899 CWF19L2Q2TBE0 894 aaKnown RBP12.72□□□□□ -0.37
ATG4B-211ENST00000429899 MFSD14BQ5SR56 506 aa12.72□□□□□ -0.37
ATG4B-211ENST00000429899 MIGA2Q7L4E1 593 aa12.72□□□□□ -0.37
ATG4B-211ENST00000429899 SNX27Q96L92 541 aa12.72□□□□□ -0.37
ATG4B-211ENST00000429899 LBHD1Q9BQE6 289 aaPredicted RBP12.72□□□□□ -0.37
ATG4B-211ENST00000429899 RCAN3Q9UKA8 241 aa12.72□□□□□ -0.37
ATG4B-211ENST00000429899 MYO9BQ13459 2157 aa12.71□□□□□ -0.37
ATG4B-211ENST00000429899 PIEZO1Q92508 2521 aa12.71□□□□□ -0.37
ATG4B-211ENST00000429899 CT47B1P0C2W7 299 aaPredicted RBP12.71□□□□□ -0.37
ATG4B-211ENST00000429899 EXOSC9Q06265 439 aaKnown RBP12.71□□□□□ -0.37
ATG4B-211ENST00000429899 UBE3BQ7Z3V4 1068 aa12.71□□□□□ -0.37
ATG4B-211ENST00000429899 HMX1Q9NP08 348 aaPredicted RBP12.71□□□□□ -0.37
ATG4B-211ENST00000429899 ATAD5Q96QE3 1844 aa12.71□□□□□ -0.38
ATG4B-211ENST00000429899 RLFQ13129 1914 aa12.7□□□□□ -0.38
ATG4B-211ENST00000429899 H7C1W4 665 aa12.7□□□□□ -0.38
ATG4B-211ENST00000429899 ELL2O00472 640 aaPredicted RBP12.7□□□□□ -0.38
ATG4B-211ENST00000429899 LRRC26Q2I0M4 334 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms