RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 SH2B1Q9NRF2 756 aaPredicted RBP26.16■■□□□ 1.78
VSX1-205ENST00000429762 DLEC1Q9Y238 1755 aa26.16■■□□□ 1.78
VSX1-205ENST00000429762 KIAA1551Q9HCM1 1747 aa26.15■■□□□ 1.78
VSX1-205ENST00000429762 DPEP1P16444 411 aa26.15■■□□□ 1.78
VSX1-205ENST00000429762 RALYLQ86SE5 291 aaKnown RBP26.15■■□□□ 1.78
VSX1-205ENST00000429762 NCOA7Q8NI08 942 aa26.15■■□□□ 1.78
VSX1-205ENST00000429762 MXD3Q9BW11 206 aa26.15■■□□□ 1.78
VSX1-205ENST00000429762 C21orf2O43822 256 aa26.15■■□□□ 1.78
VSX1-205ENST00000429762 ANTXR2P58335 489 aa26.15■■□□□ 1.78
VSX1-205ENST00000429762 APOBRQ0VD83 1088 aa26.15■■□□□ 1.78
VSX1-205ENST00000429762 C7orf43Q8WVR3 580 aa26.15■■□□□ 1.78
VSX1-205ENST00000429762 DBNDD1Q9H9R9 158 aa26.15■■□□□ 1.78
VSX1-205ENST00000429762 MYH2Q9UKX2 1941 aa26.14■■□□□ 1.78
VSX1-205ENST00000429762 CYP2D7A0A087X1C5 515 aa26.14■■□□□ 1.77
VSX1-205ENST00000429762 PRC1O43663 620 aa26.14■■□□□ 1.77
VSX1-205ENST00000429762 FOXD4L5Q5VV16 416 aaPredicted RBP26.14■■□□□ 1.77
VSX1-205ENST00000429762 FOXD4L4Q8WXT5 416 aaPredicted RBP26.14■■□□□ 1.77
VSX1-205ENST00000429762 MINDY4BA8MYZ0 360 aa26.13■■□□□ 1.77
VSX1-205ENST00000429762 B4E1Z4 1266 aa26.13■■□□□ 1.77
VSX1-205ENST00000429762 CYB5R4Q7L1T6 521 aa26.13■■□□□ 1.77
VSX1-205ENST00000429762 TIAM2Q8IVF5 1701 aa26.13■■□□□ 1.77
VSX1-205ENST00000429762 G3V3G9 751 aa26.13■■□□□ 1.77
VSX1-205ENST00000429762 DCAF8Q5TAQ9 597 aa26.13■■□□□ 1.77
VSX1-205ENST00000429762 EYA3Q99504 573 aa26.13■■□□□ 1.77
VSX1-205ENST00000429762 FAM205AQ6ZU69 1335 aa26.12■■□□□ 1.77
VSX1-205ENST00000429762 EVX2Q03828 476 aa26.12■■□□□ 1.77
VSX1-205ENST00000429762 UPF1Q92900 1129 aaKnown RBP eCLIP26.12■■□□□ 1.77
VSX1-205ENST00000429762 KCNQ5Q9NR82 932 aa26.12■■□□□ 1.77
VSX1-205ENST00000429762 NAP1L2Q9ULW6 460 aaPredicted RBP26.11■■□□□ 1.77
VSX1-205ENST00000429762 ZDHHC9Q9Y397 364 aa26.11■■□□□ 1.77
VSX1-205ENST00000429762 GOLGB1Q14789 3259 aaKnown RBP26.11■■□□□ 1.77
VSX1-205ENST00000429762 F8W031 263 aaPredicted RBP26.11■■□□□ 1.77
VSX1-205ENST00000429762 KCNA3P22001 575 aa26.11■■□□□ 1.77
VSX1-205ENST00000429762 MCM5P33992 734 aa26.11■■□□□ 1.77
VSX1-205ENST00000429762 PPARAQ07869 468 aa26.11■■□□□ 1.77
VSX1-205ENST00000429762 TRDNQ13061 729 aa26.11■■□□□ 1.77
VSX1-205ENST00000429762 SH3RF3Q8TEJ3 882 aaPredicted RBP26.11■■□□□ 1.77
VSX1-205ENST00000429762 CRNKL1Q9BZJ0 848 aaKnown RBP26.11■■□□□ 1.77
VSX1-205ENST00000429762 SMC3Q9UQE7 1217 aa26.11■■□□□ 1.77
VSX1-205ENST00000429762 PSDA5PKW4 1024 aaPredicted RBP26.1■■□□□ 1.77
VSX1-205ENST00000429762 GSTO1P78417 241 aa26.1■■□□□ 1.77
VSX1-205ENST00000429762 CERS5Q8N5B7 392 aa26.1■■□□□ 1.77
VSX1-205ENST00000429762 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.1■■□□□ 1.77
VSX1-205ENST00000429762 MROH7-TTC4A0A0A0MT08 1334 aa26.1■■□□□ 1.77
VSX1-205ENST00000429762 SNED1Q8TER0 1413 aa26.1■■□□□ 1.77
VSX1-205ENST00000429762 KIF13BQ9NQT8 1826 aa26.1■■□□□ 1.77
VSX1-205ENST00000429762 SLC4A8Q2Y0W8 1093 aa26.09■■□□□ 1.77
VSX1-205ENST00000429762 RRP12Q5JTH9 1297 aaKnown RBP26.09■■□□□ 1.77
VSX1-205ENST00000429762 TTLL6Q8N841 843 aa26.09■■□□□ 1.77
VSX1-205ENST00000429762 NUCB2P80303 420 aa26.09■■□□□ 1.77
VSX1-205ENST00000429762 AOC3Q16853 763 aa26.09■■□□□ 1.77
VSX1-205ENST00000429762 AKNAD1Q5T1N1 836 aa26.09■■□□□ 1.77
VSX1-205ENST00000429762 TBC1D22AQ8WUA7 517 aa26.09■■□□□ 1.77
VSX1-205ENST00000429762 RTFDC1Q9BY42 306 aaPredicted RBP26.09■■□□□ 1.77
VSX1-205ENST00000429762 AGXT2Q9BYV1 514 aa26.09■■□□□ 1.77
VSX1-205ENST00000429762 TOMM22Q9NS69 142 aa26.09■■□□□ 1.77
VSX1-205ENST00000429762 GJB2P29033 226 aa26.08■■□□□ 1.77
VSX1-205ENST00000429762 CYP2D6P10635 497 aa26.07■■□□□ 1.76
VSX1-205ENST00000429762 CTR9Q6PD62 1173 aa26.07■■□□□ 1.76
VSX1-205ENST00000429762 RAB11FIP4Q86YS3 637 aa26.07■■□□□ 1.76
VSX1-205ENST00000429762 MTFR1LQ9H019 292 aa26.07■■□□□ 1.76
VSX1-205ENST00000429762 DCP1AQ9NPI6 582 aaPredicted RBP26.07■■□□□ 1.76
VSX1-205ENST00000429762 BTDP43251 543 aa26.07■■□□□ 1.76
VSX1-205ENST00000429762 MFSD6Q6ZSS7 791 aa26.07■■□□□ 1.76
VSX1-205ENST00000429762 STAG1Q8WVM7 1258 aa26.07■■□□□ 1.76
VSX1-205ENST00000429762 GTF3C6Q969F1 213 aa26.07■■□□□ 1.76
VSX1-205ENST00000429762 PPP1R1BQ9UD71 204 aaPredicted RBP26.07■■□□□ 1.76
VSX1-205ENST00000429762 USP17L12C9JPN9 530 aa26.06■■□□□ 1.76
VSX1-205ENST00000429762 USP17L21D6R901 530 aa26.06■■□□□ 1.76
VSX1-205ENST00000429762 KDM4AO75164 1064 aa26.06■■□□□ 1.76
VSX1-205ENST00000429762 SCRN1Q12765 414 aa26.06■■□□□ 1.76
VSX1-205ENST00000429762 ADAMTSL1Q8N6G6 1762 aa26.06■■□□□ 1.76
VSX1-205ENST00000429762 SCN9AQ15858 1988 aa26.06■■□□□ 1.76
VSX1-205ENST00000429762 ECE2O60344 883 aa26.06■■□□□ 1.76
VSX1-205ENST00000429762 LDHCP07864 332 aa26.06■■□□□ 1.76
VSX1-205ENST00000429762 POLD1P28340 1107 aa26.06■■□□□ 1.76
VSX1-205ENST00000429762 CCT2P78371 535 aaKnown RBP26.06■■□□□ 1.76
VSX1-205ENST00000429762 KLHL34Q8N239 644 aa26.06■■□□□ 1.76
VSX1-205ENST00000429762 SENP2Q9HC62 589 aa26.06■■□□□ 1.76
VSX1-205ENST00000429762 BRPF3Q9ULD4 1205 aa26.06■■□□□ 1.76
VSX1-205ENST00000429762 CHAMP1Q96JM3 812 aa26.05■■□□□ 1.76
VSX1-205ENST00000429762 NOL10Q9BSC4 688 aaKnown RBP26.05■■□□□ 1.76
VSX1-205ENST00000429762 NCOA5Q9HCD5 579 aaKnown RBP26.05■■□□□ 1.76
VSX1-205ENST00000429762 LAMB1P07942 1786 aa26.05■■□□□ 1.76
VSX1-205ENST00000429762 MCM4P33991 863 aa26.04■■□□□ 1.76
VSX1-205ENST00000429762 USP5P45974 858 aa26.04■■□□□ 1.76
VSX1-205ENST00000429762 TMED8Q6PL24 325 aaPredicted RBP26.04■■□□□ 1.76
VSX1-205ENST00000429762 JAK2O60674 1132 aa26.04■■□□□ 1.76
VSX1-205ENST00000429762 PFKFB2O60825 505 aa26.04■■□□□ 1.76
VSX1-205ENST00000429762 BAG3O95817 575 aa26.04■■□□□ 1.76
VSX1-205ENST00000429762 USP17L8P0C7I0 530 aa26.04■■□□□ 1.76
VSX1-205ENST00000429762 ZSWIM5Q9P217 1185 aa26.04■■□□□ 1.76
VSX1-205ENST00000429762 CDK5RAP2Q96SN8 1893 aa26.03■■□□□ 1.76
VSX1-205ENST00000429762 KLF18A0A0U1RQI7 1052 aa26.03■■□□□ 1.76
VSX1-205ENST00000429762 PDIA3P30101 505 aaKnown RBP26.03■■□□□ 1.76
VSX1-205ENST00000429762 SCNN1DP51172 638 aa26.03■■□□□ 1.76
VSX1-205ENST00000429762 TGFBRAP1Q8WUH2 860 aa26.03■■□□□ 1.76
VSX1-205ENST00000429762 ZKSCAN3Q9BRR0 538 aa26.03■■□□□ 1.76
VSX1-205ENST00000429762 ATP8A2Q9NTI2 1148 aa26.03■■□□□ 1.76
VSX1-205ENST00000429762 TTF2Q9UNY4 1162 aaKnown RBP26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms