RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 MBD4O95243 580 aa20.47■□□□□ 0.87
LINC00887-203ENST00000429578 STRBPQ96SI9 672 aaKnown RBP20.47■□□□□ 0.87
LINC00887-203ENST00000429578 AATFQ9NY61 560 aaKnown RBP eCLIP20.47■□□□□ 0.87
LINC00887-203ENST00000429578 SERPINA10Q9UK55 444 aa20.47■□□□□ 0.87
LINC00887-203ENST00000429578 GPR75-ASB3A0A0A6YYF3 556 aa20.46■□□□□ 0.87
LINC00887-203ENST00000429578 BAG3O95817 575 aa20.46■□□□□ 0.87
LINC00887-203ENST00000429578 CRKP46108 304 aa20.46■□□□□ 0.87
LINC00887-203ENST00000429578 GPC2Q8N158 579 aa20.46■□□□□ 0.87
LINC00887-203ENST00000429578 LCORLQ8N3X6 602 aa20.46■□□□□ 0.87
LINC00887-203ENST00000429578 OGFOD1Q8N543 542 aa20.46■□□□□ 0.87
LINC00887-203ENST00000429578 NOL10Q9BSC4 688 aaKnown RBP20.46■□□□□ 0.87
LINC00887-203ENST00000429578 LSG1Q9H089 658 aaKnown RBP20.46■□□□□ 0.87
LINC00887-203ENST00000429578 ARMT1Q9H993 441 aa20.46■□□□□ 0.87
LINC00887-203ENST00000429578 DAGLAQ9Y4D2 1042 aa20.46■□□□□ 0.87
LINC00887-203ENST00000429578 GJA3Q9Y6H8 435 aa20.46■□□□□ 0.87
LINC00887-203ENST00000429578 EPB41L2O43491 1005 aaKnown RBP20.45■□□□□ 0.86
LINC00887-203ENST00000429578 USP17L8P0C7I0 530 aa20.45■□□□□ 0.86
LINC00887-203ENST00000429578 MMP14P50281 582 aa20.45■□□□□ 0.86
LINC00887-203ENST00000429578 PPP4CP60510 307 aa20.45■□□□□ 0.86
LINC00887-203ENST00000429578 CERS3Q8IU89 383 aa20.45■□□□□ 0.86
LINC00887-203ENST00000429578 HDAC9Q9UKV0 1011 aa20.45■□□□□ 0.86
LINC00887-203ENST00000429578 DYNLL1P63167 89 aaKnown RBP20.44■□□□□ 0.86
LINC00887-203ENST00000429578 DPF2Q92785 391 aa20.44■□□□□ 0.86
LINC00887-203ENST00000429578 ZDHHC15Q96MV8 337 aa20.44■□□□□ 0.86
LINC00887-203ENST00000429578 UPF2Q9HAU5 1272 aaKnown RBP20.44■□□□□ 0.86
LINC00887-203ENST00000429578 MYH1P12882 1939 aa20.44■□□□□ 0.86
LINC00887-203ENST00000429578 LAMA4Q16363 1823 aa20.44■□□□□ 0.86
LINC00887-203ENST00000429578 HSPD1P10809 573 aaKnown RBP20.44■□□□□ 0.86
LINC00887-203ENST00000429578 GNAT2P19087 354 aa20.44■□□□□ 0.86
LINC00887-203ENST00000429578 BTDP43251 543 aa20.44■□□□□ 0.86
LINC00887-203ENST00000429578 PTH1RQ03431 593 aa20.44■□□□□ 0.86
LINC00887-203ENST00000429578 USP26Q9BXU7 913 aa20.44■□□□□ 0.86
LINC00887-203ENST00000429578 NAV1Q8NEY1 1877 aa20.44■□□□□ 0.86
LINC00887-203ENST00000429578 GMPSP49915 693 aaPredicted RBP20.43■□□□□ 0.86
LINC00887-203ENST00000429578 VPS53Q5VIR6 699 aa20.43■□□□□ 0.86
LINC00887-203ENST00000429578 MAP4K1Q92918 833 aa20.43■□□□□ 0.86
LINC00887-203ENST00000429578 DSCC1Q9BVC3 393 aa20.43■□□□□ 0.86
LINC00887-203ENST00000429578 PLCG2P16885 1265 aa20.42■□□□□ 0.86
LINC00887-203ENST00000429578 FOXP2O15409 715 aa20.41■□□□□ 0.86
LINC00887-203ENST00000429578 RBM5P52756 815 aaKnown RBP eCLIP20.41■□□□□ 0.86
LINC00887-203ENST00000429578 APOBEC3HQ6NTF7 200 aaKnown RBP20.41■□□□□ 0.86
LINC00887-203ENST00000429578 SLC4A4Q9Y6R1 1079 aa20.41■□□□□ 0.86
LINC00887-203ENST00000429578 RPAP1Q9BWH6 1393 aaPredicted RBP20.41■□□□□ 0.86
LINC00887-203ENST00000429578 LAMB1P07942 1786 aa20.41■□□□□ 0.86
LINC00887-203ENST00000429578 PATL2C9JE40 543 aaKnown RBP20.41■□□□□ 0.86
LINC00887-203ENST00000429578 HTRA3P83110 453 aa20.41■□□□□ 0.86
LINC00887-203ENST00000429578 CFAP100Q494V2 611 aa20.41■□□□□ 0.86
LINC00887-203ENST00000429578 CRNKL1Q9BZJ0 848 aaKnown RBP20.41■□□□□ 0.86
LINC00887-203ENST00000429578 IQCA1LA6NCM1 817 aa20.4■□□□□ 0.86
LINC00887-203ENST00000429578 RHBDL3P58872 404 aa20.4■□□□□ 0.86
LINC00887-203ENST00000429578 ZNF280AP59817 542 aaPredicted RBP20.4■□□□□ 0.86
LINC00887-203ENST00000429578 MTMR14Q8NCE2 650 aa20.4■□□□□ 0.86
LINC00887-203ENST00000429578 SH3RF3Q8TEJ3 882 aaPredicted RBP20.4■□□□□ 0.86
LINC00887-203ENST00000429578 CNOT7Q9UIV1 285 aaKnown RBP20.4■□□□□ 0.86
LINC00887-203ENST00000429578 SCN4AP35499 1836 aa20.4■□□□□ 0.86
LINC00887-203ENST00000429578 DDX60LQ5H9U9 1706 aaKnown RBP20.39■□□□□ 0.86
LINC00887-203ENST00000429578 GSG1L2A8MUP6 293 aa20.39■□□□□ 0.86
LINC00887-203ENST00000429578 PRKAB2O43741 272 aa20.39■□□□□ 0.86
LINC00887-203ENST00000429578 DNAJC5GQ8N7S2 189 aa20.39■□□□□ 0.86
LINC00887-203ENST00000429578 L3MBTL3Q96JM7 780 aaPredicted RBP20.39■□□□□ 0.86
LINC00887-203ENST00000429578 PCDHAC2Q9Y5I4 1007 aa20.39■□□□□ 0.86
LINC00887-203ENST00000429578 APPP05067 770 aa20.39■□□□□ 0.85
LINC00887-203ENST00000429578 DLGAP5Q15398 846 aa20.39■□□□□ 0.85
LINC00887-203ENST00000429578 MICALL2Q8IY33 904 aa20.39■□□□□ 0.85
LINC00887-203ENST00000429578 SDR42E1Q8WUS8 393 aa20.39■□□□□ 0.85
LINC00887-203ENST00000429578 PRMT6Q96LA8 375 aaPredicted RBP20.39■□□□□ 0.85
LINC00887-203ENST00000429578 C22orf23Q9BZE7 217 aa20.39■□□□□ 0.85
LINC00887-203ENST00000429578 MYOZ2Q9NPC6 264 aa20.39■□□□□ 0.85
LINC00887-203ENST00000429578 RBM8AQ9Y5S9 174 aaKnown RBP20.39■□□□□ 0.85
LINC00887-203ENST00000429578 U3KPZ7 1027 aaPredicted RBP20.39■□□□□ 0.85
LINC00887-203ENST00000429578 SHTN1A0MZ66 631 aa20.38■□□□□ 0.85
LINC00887-203ENST00000429578 SPDYE2BA6NHP3 402 aa20.38■□□□□ 0.85
LINC00887-203ENST00000429578 SPDYE6P0CI01 402 aa20.38■□□□□ 0.85
LINC00887-203ENST00000429578 IFNL3Q8IZI9 196 aa20.38■□□□□ 0.85
LINC00887-203ENST00000429578 NACAP1Q9BZK3 213 aa20.38■□□□□ 0.85
LINC00887-203ENST00000429578 GPRC5DQ9NZD1 345 aa20.38■□□□□ 0.85
LINC00887-203ENST00000429578 ZMYM6O95789 1325 aa20.38■□□□□ 0.85
LINC00887-203ENST00000429578 FGAP02671 866 aa20.37■□□□□ 0.85
LINC00887-203ENST00000429578 HSPA4P34932 840 aa20.37■□□□□ 0.85
LINC00887-203ENST00000429578 NECTIN1Q15223 517 aa20.37■□□□□ 0.85
LINC00887-203ENST00000429578 ALX1Q15699 326 aa20.37■□□□□ 0.85
LINC00887-203ENST00000429578 CDC42EP5Q6NZY7 148 aa20.37■□□□□ 0.85
LINC00887-203ENST00000429578 GIMAP6Q6P9H5 292 aa20.37■□□□□ 0.85
LINC00887-203ENST00000429578 TEX11Q8IYF3 940 aa20.37■□□□□ 0.85
LINC00887-203ENST00000429578 EPB41L4AQ9HCS5 686 aaPredicted RBP20.37■□□□□ 0.85
LINC00887-203ENST00000429578 ATP8A2Q9NTI2 1148 aa20.37■□□□□ 0.85
LINC00887-203ENST00000429578 USP40Q9NVE5 1235 aa20.37■□□□□ 0.85
LINC00887-203ENST00000429578 H7C1D1 291 aa20.36■□□□□ 0.85
LINC00887-203ENST00000429578 MCCP23508 829 aa20.36■□□□□ 0.85
LINC00887-203ENST00000429578 RBM25P49756 843 aaKnown RBP20.36■□□□□ 0.85
LINC00887-203ENST00000429578 ZBED3Q96IU2 234 aaPredicted RBP20.36■□□□□ 0.85
LINC00887-203ENST00000429578 TBC1D32Q96NH3 1257 aa20.36■□□□□ 0.85
LINC00887-203ENST00000429578 CTNNA3Q9UI47 895 aa20.36■□□□□ 0.85
LINC00887-203ENST00000429578 POTEIP0CG38 1075 aa20.36■□□□□ 0.85
LINC00887-203ENST00000429578 POTEJP0CG39 1038 aa20.36■□□□□ 0.85
LINC00887-203ENST00000429578 POLR2AP24928 1970 aaKnown RBP20.36■□□□□ 0.85
LINC00887-203ENST00000429578 USP5P45974 858 aa20.36■□□□□ 0.85
LINC00887-203ENST00000429578 CHADLQ6NUI6 762 aa20.36■□□□□ 0.85
LINC00887-203ENST00000429578 DDRGK1Q96HY6 314 aa20.36■□□□□ 0.85
LINC00887-203ENST00000429578 NAPBQ9H115 298 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms