RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 DENND2AQ9ULE3 1009 aa13.47□□□□□ -0.25
CECR3-201ENST00000428828 MYH2Q9UKX2 1941 aa13.46□□□□□ -0.25
CECR3-201ENST00000428828 ADAMTSL1Q8N6G6 1762 aa13.46□□□□□ -0.25
CECR3-201ENST00000428828 PTMAP06454 111 aaKnown RBP13.46□□□□□ -0.25
CECR3-201ENST00000428828 IL1R1P14778 569 aa13.46□□□□□ -0.25
CECR3-201ENST00000428828 MCTP1Q6DN14 999 aa13.46□□□□□ -0.25
CECR3-201ENST00000428828 NIM1KQ8IY84 436 aa13.46□□□□□ -0.25
CECR3-201ENST00000428828 CNTROBQ8N137 903 aa13.46□□□□□ -0.25
CECR3-201ENST00000428828 CALCOCO1Q9P1Z2 691 aa13.46□□□□□ -0.25
CECR3-201ENST00000428828 LTBP3Q9NS15 1303 aa13.45□□□□□ -0.26
CECR3-201ENST00000428828 TPM3P06753 285 aa13.45□□□□□ -0.26
CECR3-201ENST00000428828 SLFN14P0C7P3 912 aa13.45□□□□□ -0.26
CECR3-201ENST00000428828 GTF2IP78347 998 aa13.45□□□□□ -0.26
CECR3-201ENST00000428828 FSD1Q9BTV5 496 aa13.45□□□□□ -0.26
CECR3-201ENST00000428828 ABCF2Q9UG63 623 aa13.45□□□□□ -0.26
CECR3-201ENST00000428828 SEMA3EO15041 775 aa13.45□□□□□ -0.26
CECR3-201ENST00000428828 IRX3P78415 501 aaPredicted RBP13.45□□□□□ -0.26
CECR3-201ENST00000428828 JDP2Q8WYK2 163 aa13.45□□□□□ -0.26
CECR3-201ENST00000428828 YDJCA8MPS7 323 aa13.44□□□□□ -0.26
CECR3-201ENST00000428828 VGLL3A8MV65 326 aa13.44□□□□□ -0.26
CECR3-201ENST00000428828 IDH1O75874 414 aaKnown RBP13.44□□□□□ -0.26
CECR3-201ENST00000428828 RABEP1Q15276 862 aa13.44□□□□□ -0.26
CECR3-201ENST00000428828 GPT2Q8TD30 523 aa13.44□□□□□ -0.26
CECR3-201ENST00000428828 MXD3Q9BW11 206 aa13.44□□□□□ -0.26
CECR3-201ENST00000428828 YY1AP1Q9H869 796 aa13.44□□□□□ -0.26
CECR3-201ENST00000428828 PIH1D3Q9NQM4 214 aaKnown RBP13.44□□□□□ -0.26
CECR3-201ENST00000428828 MORC2Q9Y6X9 1032 aaPredicted RBP13.44□□□□□ -0.26
CECR3-201ENST00000428828 RAD17O75943 681 aa13.43□□□□□ -0.26
CECR3-201ENST00000428828 TTLL5Q6EMB2 1281 aa13.43□□□□□ -0.26
CECR3-201ENST00000428828 PODNQ7Z5L7 613 aa13.43□□□□□ -0.26
CECR3-201ENST00000428828 EVI5LQ96CN4 794 aa13.43□□□□□ -0.26
CECR3-201ENST00000428828 CHGBP05060 677 aa13.43□□□□□ -0.26
CECR3-201ENST00000428828 LMNB1P20700 586 aa13.43□□□□□ -0.26
CECR3-201ENST00000428828 PAXIP1Q6ZW49 1069 aaPredicted RBP13.43□□□□□ -0.26
CECR3-201ENST00000428828 SYAP1Q96A49 352 aaPredicted RBP13.43□□□□□ -0.26
CECR3-201ENST00000428828 VPS33BQ9H267 617 aa13.43□□□□□ -0.26
CECR3-201ENST00000428828 TSPY26PQ9H489 355 aa13.43□□□□□ -0.26
CECR3-201ENST00000428828 RNF181Q9P0P0 153 aa13.43□□□□□ -0.26
CECR3-201ENST00000428828 LRP2BPQ9P2M1 347 aa13.43□□□□□ -0.26
CECR3-201ENST00000428828 DDX41Q9UJV9 622 aaKnown RBP13.43□□□□□ -0.26
CECR3-201ENST00000428828 CD2BP2O95400 341 aaKnown RBP13.42□□□□□ -0.26
CECR3-201ENST00000428828 TTF1Q15361 905 aaPredicted RBP13.42□□□□□ -0.26
CECR3-201ENST00000428828 MFSD14BQ5SR56 506 aa13.42□□□□□ -0.26
CECR3-201ENST00000428828 KBTBD3Q8NAB2 608 aa13.42□□□□□ -0.26
CECR3-201ENST00000428828 WDR66Q8TBY9 1149 aa13.42□□□□□ -0.26
CECR3-201ENST00000428828 RAI14Q9P0K7 980 aa13.42□□□□□ -0.26
CECR3-201ENST00000428828 TMEM63CQ9P1W3 806 aa13.42□□□□□ -0.26
CECR3-201ENST00000428828 ZNRF3Q9ULT6 936 aa13.42□□□□□ -0.26
CECR3-201ENST00000428828 SPDYE4A6NLX3 237 aa13.41□□□□□ -0.26
CECR3-201ENST00000428828 F8W031 263 aaPredicted RBP13.41□□□□□ -0.26
CECR3-201ENST00000428828 GRIN3BO60391 1043 aa13.41□□□□□ -0.26
CECR3-201ENST00000428828 U2AF2P26368 475 aaKnown RBP eCLIP13.41□□□□□ -0.26
CECR3-201ENST00000428828 PRDX5P30044 214 aa13.41□□□□□ -0.26
CECR3-201ENST00000428828 TERF2Q15554 542 aa13.41□□□□□ -0.26
CECR3-201ENST00000428828 GRIK5Q16478 980 aa13.41□□□□□ -0.26
CECR3-201ENST00000428828 SLFNL1Q499Z3 407 aa13.41□□□□□ -0.26
CECR3-201ENST00000428828 CTNNA3Q9UI47 895 aa13.41□□□□□ -0.26
CECR3-201ENST00000428828 PDS5AQ29RF7 1337 aaKnown RBP13.41□□□□□ -0.26
CECR3-201ENST00000428828 USP17L3A6NCW0 530 aa13.41□□□□□ -0.26
CECR3-201ENST00000428828 USP17L4A6NCW7 530 aa13.41□□□□□ -0.26
CECR3-201ENST00000428828 USP17L1Q7RTZ2 530 aa13.41□□□□□ -0.26
CECR3-201ENST00000428828 RGS22Q8NE09 1264 aa13.41□□□□□ -0.26
CECR3-201ENST00000428828 FAM205AQ6ZU69 1335 aa13.4□□□□□ -0.26
CECR3-201ENST00000428828 PSMD14O00487 310 aa13.4□□□□□ -0.26
CECR3-201ENST00000428828 C9orf131Q5VYM1 1079 aa13.4□□□□□ -0.26
CECR3-201ENST00000428828 CERS5Q8N5B7 392 aa13.4□□□□□ -0.26
CECR3-201ENST00000428828 CDK5RAP2Q96SN8 1893 aa13.39□□□□□ -0.27
CECR3-201ENST00000428828 CDC45O75419 566 aa13.39□□□□□ -0.27
CECR3-201ENST00000428828 LDHBP07195 334 aaKnown RBP13.39□□□□□ -0.27
CECR3-201ENST00000428828 MAP3K12Q12852 859 aa13.39□□□□□ -0.27
CECR3-201ENST00000428828 DACT2Q5SW24 774 aa13.39□□□□□ -0.27
CECR3-201ENST00000428828 SLC9C2Q5TAH2 1124 aa13.39□□□□□ -0.27
CECR3-201ENST00000428828 STRIP1Q5VSL9 837 aa13.39□□□□□ -0.27
CECR3-201ENST00000428828 DZIP1Q86YF9 867 aaKnown RBP13.39□□□□□ -0.27
CECR3-201ENST00000428828 PLCD3Q8N3E9 789 aa13.39□□□□□ -0.27
CECR3-201ENST00000428828 ZGPATQ8N5A5 531 aaKnown RBP13.39□□□□□ -0.27
CECR3-201ENST00000428828 MAGEB6Q8N7X4 407 aa13.39□□□□□ -0.27
CECR3-201ENST00000428828 TBC1D22AQ8WUA7 517 aa13.39□□□□□ -0.27
CECR3-201ENST00000428828 TSC1Q92574 1164 aa13.39□□□□□ -0.27
CECR3-201ENST00000428828 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.39□□□□□ -0.27
CECR3-201ENST00000428828 EFCC1Q9HA90 598 aa13.39□□□□□ -0.27
CECR3-201ENST00000428828 GJA3Q9Y6H8 435 aa13.39□□□□□ -0.27
CECR3-201ENST00000428828 ECM29Q5VYK3 1845 aa13.39□□□□□ -0.27
CECR3-201ENST00000428828 ZNF541Q9H0D2 1346 aa13.39□□□□□ -0.27
CECR3-201ENST00000428828 SALL1Q9NSC2 1324 aa13.39□□□□□ -0.27
CECR3-201ENST00000428828 SYCE3A1L190 88 aa13.39□□□□□ -0.27
CECR3-201ENST00000428828 PRPF40AO75400 957 aaKnown RBP13.39□□□□□ -0.27
CECR3-201ENST00000428828 EIF6P56537 245 aaKnown RBP13.39□□□□□ -0.27
CECR3-201ENST00000428828 CXCL9Q07325 125 aa13.39□□□□□ -0.27
CECR3-201ENST00000428828 CIAPIN1Q6FI81 312 aa13.39□□□□□ -0.27
CECR3-201ENST00000428828 CWC27Q6UX04 472 aaKnown RBP13.39□□□□□ -0.27
CECR3-201ENST00000428828 ZBTB12Q9Y330 459 aaPredicted RBP13.39□□□□□ -0.27
CECR3-201ENST00000428828 MMP14P50281 582 aa13.38□□□□□ -0.27
CECR3-201ENST00000428828 MECOMQ03112 1051 aa13.38□□□□□ -0.27
CECR3-201ENST00000428828 NMIQ13287 307 aaPredicted RBP13.38□□□□□ -0.27
CECR3-201ENST00000428828 SPTY2D1Q68D10 685 aaPredicted RBP13.38□□□□□ -0.27
CECR3-201ENST00000428828 KIAA0825Q8IV33 1275 aa13.38□□□□□ -0.27
CECR3-201ENST00000428828 FAM53CQ9NYF3 392 aa13.38□□□□□ -0.27
CECR3-201ENST00000428828 DCAF8L1A6NGE4 600 aa13.37□□□□□ -0.27
CECR3-201ENST00000428828 FZD9O00144 591 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms