RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 MS4A4AQ96JQ5 239 aa21.2■□□□□ 0.98
TRIM39-209ENST00000428728 TRIM17Q9Y577 477 aa21.2■□□□□ 0.98
TRIM39-209ENST00000428728 TESPA1A2RU30 521 aaPredicted RBP21.19■□□□□ 0.98
TRIM39-209ENST00000428728 IPO8O15397 1037 aaKnown RBP21.19■□□□□ 0.98
TRIM39-209ENST00000428728 TCP10Q12799 353 aa21.19■□□□□ 0.98
TRIM39-209ENST00000428728 DCAF15Q66K64 600 aa21.19■□□□□ 0.98
TRIM39-209ENST00000428728 CDC42EP5Q6NZY7 148 aa21.19■□□□□ 0.98
TRIM39-209ENST00000428728 ATF7IPQ6VMQ6 1270 aa21.19■□□□□ 0.98
TRIM39-209ENST00000428728 CD99L2Q8TCZ2 262 aa21.19■□□□□ 0.98
TRIM39-209ENST00000428728 BRI3BPQ8WY22 251 aa21.19■□□□□ 0.98
TRIM39-209ENST00000428728 SNCAIPQ9Y6H5 919 aa21.19■□□□□ 0.98
TRIM39-209ENST00000428728 SALL1Q9NSC2 1324 aa21.19■□□□□ 0.98
TRIM39-209ENST00000428728 SPDYE5A6NIY4 337 aa21.18■□□□□ 0.98
TRIM39-209ENST00000428728 SEMA3EO15041 775 aa21.18■□□□□ 0.98
TRIM39-209ENST00000428728 GTF2A2P52657 109 aa21.18■□□□□ 0.98
TRIM39-209ENST00000428728 TFCP2Q12800 502 aa21.18■□□□□ 0.98
TRIM39-209ENST00000428728 MIGA2Q7L4E1 593 aa21.18■□□□□ 0.98
TRIM39-209ENST00000428728 OTOP1Q7RTM1 612 aa21.18■□□□□ 0.98
TRIM39-209ENST00000428728 ZKSCAN4Q969J2 545 aaPredicted RBP21.18■□□□□ 0.98
TRIM39-209ENST00000428728 RBBP6Q7Z6E9 1792 aaKnown RBP21.18■□□□□ 0.98
TRIM39-209ENST00000428728 A0A1B0GUL7 405 aa21.17■□□□□ 0.98
TRIM39-209ENST00000428728 TIMM10P62072 90 aa21.17■□□□□ 0.98
TRIM39-209ENST00000428728 NFIAQ12857 509 aa21.17■□□□□ 0.98
TRIM39-209ENST00000428728 MTX1Q13505 466 aa21.17■□□□□ 0.98
TRIM39-209ENST00000428728 RASGRF1Q13972 1273 aa21.17■□□□□ 0.98
TRIM39-209ENST00000428728 TAF1CQ15572 869 aaPredicted RBP21.17■□□□□ 0.98
TRIM39-209ENST00000428728 FAM151AQ8WW52 585 aa21.17■□□□□ 0.98
TRIM39-209ENST00000428728 ERO1AQ96HE7 468 aa21.17■□□□□ 0.98
TRIM39-209ENST00000428728 ZNF341Q9BYN7 854 aa21.17■□□□□ 0.98
TRIM39-209ENST00000428728 PDE4DIPQ5VU43 2346 aa21.17■□□□□ 0.98
TRIM39-209ENST00000428728 DOCK1Q14185 1865 aa21.16■□□□□ 0.98
TRIM39-209ENST00000428728 HNRNPUQ00839 825 aaKnown RBP eCLIP21.16■□□□□ 0.98
TRIM39-209ENST00000428728 ERO1BQ86YB8 467 aa21.16■□□□□ 0.98
TRIM39-209ENST00000428728 ABCF2Q9UG63 623 aa21.16■□□□□ 0.98
TRIM39-209ENST00000428728 MAST2Q6P0Q8 1798 aa21.15■□□□□ 0.98
TRIM39-209ENST00000428728 TNRC18O15417 2968 aaPredicted RBP21.15■□□□□ 0.98
TRIM39-209ENST00000428728 GNAI2P04899 355 aa21.15■□□□□ 0.98
TRIM39-209ENST00000428728 INPP5BP32019 993 aa21.15■□□□□ 0.98
TRIM39-209ENST00000428728 DZIP1Q86YF9 867 aaKnown RBP21.15■□□□□ 0.98
TRIM39-209ENST00000428728 FAM43AQ8N2R8 423 aa21.15■□□□□ 0.98
TRIM39-209ENST00000428728 ZGPATQ8N5A5 531 aaKnown RBP21.15■□□□□ 0.98
TRIM39-209ENST00000428728 XAGE2Q96GT9 111 aa21.15■□□□□ 0.98
TRIM39-209ENST00000428728 USP40Q9NVE5 1235 aa21.15■□□□□ 0.98
TRIM39-209ENST00000428728 AKAP2Q9Y2D5 859 aa21.15■□□□□ 0.98
TRIM39-209ENST00000428728 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.15■□□□□ 0.98
TRIM39-209ENST00000428728 PTPRFP10586 1907 aa21.15■□□□□ 0.98
TRIM39-209ENST00000428728 MYO5AQ9Y4I1 1855 aaKnown RBP21.15■□□□□ 0.98
TRIM39-209ENST00000428728 SP3Q02447 781 aa21.14■□□□□ 0.97
TRIM39-209ENST00000428728 MVPQ14764 893 aaKnown RBP21.14■□□□□ 0.97
TRIM39-209ENST00000428728 FAM198AQ9UFP1 575 aa21.14■□□□□ 0.97
TRIM39-209ENST00000428728 ATAD5Q96QE3 1844 aa21.13■□□□□ 0.97
TRIM39-209ENST00000428728 PNMA6EA0A0J9YXQ4 647 aa21.13■□□□□ 0.97
TRIM39-209ENST00000428728 IRF6O14896 467 aa21.13■□□□□ 0.97
TRIM39-209ENST00000428728 PPIL2Q13356 520 aa21.13■□□□□ 0.97
TRIM39-209ENST00000428728 MIER1Q8N108 512 aa21.13■□□□□ 0.97
TRIM39-209ENST00000428728 TMEM57Q8N5G2 664 aa21.13■□□□□ 0.97
TRIM39-209ENST00000428728 NEUROD6Q96NK8 337 aa21.13■□□□□ 0.97
TRIM39-209ENST00000428728 ZFYVE28Q9HCC9 887 aa21.13■□□□□ 0.97
TRIM39-209ENST00000428728 GAKO14976 1311 aa21.12■□□□□ 0.97
TRIM39-209ENST00000428728 PDS5AQ29RF7 1337 aaKnown RBP21.12■□□□□ 0.97
TRIM39-209ENST00000428728 CDK5RAP2Q96SN8 1893 aa21.12■□□□□ 0.97
TRIM39-209ENST00000428728 CETPP11597 493 aa21.12■□□□□ 0.97
TRIM39-209ENST00000428728 CAP1Q01518 475 aa21.12■□□□□ 0.97
TRIM39-209ENST00000428728 SNAPC2Q13487 334 aa21.12■□□□□ 0.97
TRIM39-209ENST00000428728 ZKSCAN2Q63HK3 967 aa21.12■□□□□ 0.97
TRIM39-209ENST00000428728 EFCC1Q9HA90 598 aa21.12■□□□□ 0.97
TRIM39-209ENST00000428728 PHIPQ8WWQ0 1821 aa21.12■□□□□ 0.97
TRIM39-209ENST00000428728 RFX7Q2KHR2 1363 aa21.11■□□□□ 0.97
TRIM39-209ENST00000428728 GORABQ5T7V8 394 aa21.11■□□□□ 0.97
TRIM39-209ENST00000428728 ZFPM1Q8IX07 1006 aa21.11■□□□□ 0.97
TRIM39-209ENST00000428728 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.11■□□□□ 0.97
TRIM39-209ENST00000428728 BTBD19C9JJ37 291 aa21.1■□□□□ 0.97
TRIM39-209ENST00000428728 ZBTB22O15209 634 aa21.1■□□□□ 0.97
TRIM39-209ENST00000428728 RGS3P49796 1198 aa21.1■□□□□ 0.97
TRIM39-209ENST00000428728 G3BP1Q13283 466 aaKnown RBP eCLIP21.1■□□□□ 0.97
TRIM39-209ENST00000428728 PI16Q6UXB8 463 aa21.1■□□□□ 0.97
TRIM39-209ENST00000428728 PTPN22Q9Y2R2 807 aa21.1■□□□□ 0.97
TRIM39-209ENST00000428728 MGAMO43451 1857 aa21.09■□□□□ 0.97
TRIM39-209ENST00000428728 MROH7-TTC4A0A0A0MT08 1334 aa21.09■□□□□ 0.97
TRIM39-209ENST00000428728 BTDP43251 543 aa21.09■□□□□ 0.97
TRIM39-209ENST00000428728 PPATQ06203 517 aa21.09■□□□□ 0.97
TRIM39-209ENST00000428728 SPTY2D1Q68D10 685 aaPredicted RBP21.09■□□□□ 0.97
TRIM39-209ENST00000428728 ZSCAN29Q8IWY8 852 aaPredicted RBP21.09■□□□□ 0.97
TRIM39-209ENST00000428728 SLF2Q8IX21 1173 aa21.09■□□□□ 0.97
TRIM39-209ENST00000428728 HTTP42858 3142 aa21.08■□□□□ 0.97
TRIM39-209ENST00000428728 WDHD1O75717 1129 aaPredicted RBP21.08■□□□□ 0.97
TRIM39-209ENST00000428728 PICALMQ13492 652 aa21.08■□□□□ 0.97
TRIM39-209ENST00000428728 DIEXFQ68CQ4 756 aaKnown RBP21.08■□□□□ 0.97
TRIM39-209ENST00000428728 ERICH6Q7L0X2 663 aa21.08■□□□□ 0.97
TRIM39-209ENST00000428728 FTSJ3Q8IY81 847 aaKnown RBP21.08■□□□□ 0.97
TRIM39-209ENST00000428728 HMG20BQ9P0W2 317 aa21.08■□□□□ 0.97
TRIM39-209ENST00000428728 ZNF112Q9UJU3 913 aa21.08■□□□□ 0.97
TRIM39-209ENST00000428728 FOCADQ5VW36 1801 aa21.08■□□□□ 0.96
TRIM39-209ENST00000428728 ATRNL1Q5VV63 1379 aa21.08■□□□□ 0.96
TRIM39-209ENST00000428728 MECOMQ03112 1051 aa21.07■□□□□ 0.96
TRIM39-209ENST00000428728 IDI2Q9BXS1 227 aa21.07■□□□□ 0.96
TRIM39-209ENST00000428728 C1orf115Q9H7X2 142 aa21.07■□□□□ 0.96
TRIM39-209ENST00000428728 ENTPD3O75355 529 aa21.06■□□□□ 0.96
TRIM39-209ENST00000428728 NOL9Q5SY16 702 aaKnown RBP21.06■□□□□ 0.96
TRIM39-209ENST00000428728 SPATA5Q8NB90 893 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms