RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 RBM26Q5T8P6 1007 aaKnown RBP9.47□□□□□ -0.89
HMGA1P4-201ENST00000428643 VPS53Q5VIR6 699 aa9.47□□□□□ -0.89
HMGA1P4-201ENST00000428643 DPY19L2Q6NUT2 758 aa9.47□□□□□ -0.89
HMGA1P4-201ENST00000428643 SH3RF3Q8TEJ3 882 aaPredicted RBP9.47□□□□□ -0.89
HMGA1P4-201ENST00000428643 DPF2Q92785 391 aa9.47□□□□□ -0.89
HMGA1P4-201ENST00000428643 FAM163AQ96GL9 167 aaPredicted RBP9.47□□□□□ -0.89
HMGA1P4-201ENST00000428643 DDRGK1Q96HY6 314 aa9.47□□□□□ -0.89
HMGA1P4-201ENST00000428643 STRBPQ96SI9 672 aaKnown RBP9.47□□□□□ -0.89
HMGA1P4-201ENST00000428643 NACAP1Q9BZK3 213 aa9.47□□□□□ -0.89
HMGA1P4-201ENST00000428643 MYOZ2Q9NPC6 264 aa9.47□□□□□ -0.89
HMGA1P4-201ENST00000428643 CNOT7Q9UIV1 285 aaKnown RBP9.47□□□□□ -0.89
HMGA1P4-201ENST00000428643 PCDHAC2Q9Y5I4 1007 aa9.47□□□□□ -0.89
HMGA1P4-201ENST00000428643 SLC4A4Q9Y6R1 1079 aa9.47□□□□□ -0.89
HMGA1P4-201ENST00000428643 GOLGB1Q14789 3259 aaKnown RBP9.46□□□□□ -0.89
HMGA1P4-201ENST00000428643 SPDYE2BA6NHP3 402 aa9.46□□□□□ -0.9
HMGA1P4-201ENST00000428643 H7C1D1 291 aa9.46□□□□□ -0.9
HMGA1P4-201ENST00000428643 PRKAB2O43741 272 aa9.46□□□□□ -0.9
HMGA1P4-201ENST00000428643 SPDYE6P0CI01 402 aa9.46□□□□□ -0.9
HMGA1P4-201ENST00000428643 MCCP23508 829 aa9.46□□□□□ -0.9
HMGA1P4-201ENST00000428643 TDO2P48775 406 aa9.46□□□□□ -0.9
HMGA1P4-201ENST00000428643 MMP14P50281 582 aa9.46□□□□□ -0.9
HMGA1P4-201ENST00000428643 ZNF280AP59817 542 aaPredicted RBP9.46□□□□□ -0.9
HMGA1P4-201ENST00000428643 PPP4CP60510 307 aa9.46□□□□□ -0.9
HMGA1P4-201ENST00000428643 PTH1RQ03431 593 aa9.46□□□□□ -0.9
HMGA1P4-201ENST00000428643 KIF4BQ2VIQ3 1234 aa9.46□□□□□ -0.9
HMGA1P4-201ENST00000428643 TBC1D10BQ4KMP7 808 aaPredicted RBP9.46□□□□□ -0.9
HMGA1P4-201ENST00000428643 APOBEC3HQ6NTF7 200 aaKnown RBP9.46□□□□□ -0.9
HMGA1P4-201ENST00000428643 CDC42EP5Q6NZY7 148 aa9.46□□□□□ -0.9
HMGA1P4-201ENST00000428643 SDR42E1Q8WUS8 393 aa9.46□□□□□ -0.9
HMGA1P4-201ENST00000428643 MRIQ9BWK5 157 aa9.46□□□□□ -0.9
HMGA1P4-201ENST00000428643 LSG1Q9H089 658 aaKnown RBP9.46□□□□□ -0.9
HMGA1P4-201ENST00000428643 NAPBQ9H115 298 aa9.46□□□□□ -0.9
HMGA1P4-201ENST00000428643 RNF39Q9H2S5 420 aa9.46□□□□□ -0.9
HMGA1P4-201ENST00000428643 USP40Q9NVE5 1235 aa9.46□□□□□ -0.9
HMGA1P4-201ENST00000428643 GPRC5DQ9NZD1 345 aa9.46□□□□□ -0.9
HMGA1P4-201ENST00000428643 TMOD2Q9NZR1 351 aa9.46□□□□□ -0.9
HMGA1P4-201ENST00000428643 ZNF646O15015 1829 aaPredicted RBP9.46□□□□□ -0.9
HMGA1P4-201ENST00000428643 CHD4Q14839 1912 aa9.46□□□□□ -0.9
HMGA1P4-201ENST00000428643 AK9Q5TCS8 1911 aa9.46□□□□□ -0.9
HMGA1P4-201ENST00000428643 CLRN2A0PK11 232 aa9.45□□□□□ -0.9
HMGA1P4-201ENST00000428643 MYO1BO43795 1136 aa9.45□□□□□ -0.9
HMGA1P4-201ENST00000428643 HSPD1P10809 573 aaKnown RBP9.45□□□□□ -0.9
HMGA1P4-201ENST00000428643 CACNB3P54284 484 aa9.45□□□□□ -0.9
HMGA1P4-201ENST00000428643 RHBDL3P58872 404 aa9.45□□□□□ -0.9
HMGA1P4-201ENST00000428643 PICALMQ13492 652 aa9.45□□□□□ -0.9
HMGA1P4-201ENST00000428643 SAMD7Q7Z3H4 446 aa9.45□□□□□ -0.9
HMGA1P4-201ENST00000428643 MAPKAPK5Q8IW41 473 aa9.45□□□□□ -0.9
HMGA1P4-201ENST00000428643 DSCC1Q9BVC3 393 aa9.45□□□□□ -0.9
HMGA1P4-201ENST00000428643 TDRD3Q9H7E2 651 aaKnown RBP9.45□□□□□ -0.9
HMGA1P4-201ENST00000428643 VEZTQ9HBM0 779 aa9.45□□□□□ -0.9
HMGA1P4-201ENST00000428643 RBM8AQ9Y5S9 174 aaKnown RBP9.45□□□□□ -0.9
HMGA1P4-201ENST00000428643 U3KPZ7 1027 aaPredicted RBP9.45□□□□□ -0.9
HMGA1P4-201ENST00000428643 ADAMTSL1Q8N6G6 1762 aa9.45□□□□□ -0.9
HMGA1P4-201ENST00000428643 PSME4Q14997 1843 aa9.45□□□□□ -0.9
HMGA1P4-201ENST00000428643 GLTPD2A6NH11 291 aa9.44□□□□□ -0.9
HMGA1P4-201ENST00000428643 GSG1L2A8MUP6 293 aa9.44□□□□□ -0.9
HMGA1P4-201ENST00000428643 FOXP2O15409 715 aa9.44□□□□□ -0.9
HMGA1P4-201ENST00000428643 EGFRP00533 1210 aa9.44□□□□□ -0.9
HMGA1P4-201ENST00000428643 EPS15P42566 896 aa9.44□□□□□ -0.9
HMGA1P4-201ENST00000428643 SPDYE2Q495Y8 402 aa9.44□□□□□ -0.9
HMGA1P4-201ENST00000428643 AMOTL1Q8IY63 956 aa9.44□□□□□ -0.9
HMGA1P4-201ENST00000428643 MTMR14Q8NCE2 650 aa9.44□□□□□ -0.9
HMGA1P4-201ENST00000428643 TRPM4Q8TD43 1214 aa9.44□□□□□ -0.9
HMGA1P4-201ENST00000428643 TGFBRAP1Q8WUH2 860 aa9.44□□□□□ -0.9
HMGA1P4-201ENST00000428643 L3MBTL3Q96JM7 780 aaPredicted RBP9.44□□□□□ -0.9
HMGA1P4-201ENST00000428643 PRMT6Q96LA8 375 aaPredicted RBP9.44□□□□□ -0.9
HMGA1P4-201ENST00000428643 EPB41L4AQ9HCS5 686 aaPredicted RBP9.44□□□□□ -0.9
HMGA1P4-201ENST00000428643 ATP8A2Q9NTI2 1148 aa9.44□□□□□ -0.9
HMGA1P4-201ENST00000428643 SAP30BPQ9UHR5 308 aaKnown RBP9.44□□□□□ -0.9
HMGA1P4-201ENST00000428643 CTNNA3Q9UI47 895 aa9.44□□□□□ -0.9
HMGA1P4-201ENST00000428643 FLT1P17948 1338 aa9.44□□□□□ -0.9
HMGA1P4-201ENST00000428643 RPAP1Q9BWH6 1393 aaPredicted RBP9.44□□□□□ -0.9
HMGA1P4-201ENST00000428643 ZMYM6O95789 1325 aa9.43□□□□□ -0.9
HMGA1P4-201ENST00000428643 IQCA1LA6NCM1 817 aa9.43□□□□□ -0.9
HMGA1P4-201ENST00000428643 PATL2C9JE40 543 aaKnown RBP9.43□□□□□ -0.9
HMGA1P4-201ENST00000428643 WNT10BO00744 389 aa9.43□□□□□ -0.9
HMGA1P4-201ENST00000428643 WDHD1O75717 1129 aaPredicted RBP9.43□□□□□ -0.9
HMGA1P4-201ENST00000428643 HAND2P61296 217 aa9.43□□□□□ -0.9
HMGA1P4-201ENST00000428643 NFIAQ12857 509 aa9.43□□□□□ -0.9
HMGA1P4-201ENST00000428643 SLC4A8Q2Y0W8 1093 aa9.43□□□□□ -0.9
HMGA1P4-201ENST00000428643 NBPF9Q3BBW0 867 aa9.43□□□□□ -0.9
HMGA1P4-201ENST00000428643 RNF20Q5VTR2 975 aa9.43□□□□□ -0.9
HMGA1P4-201ENST00000428643 IFNL3Q8IZI9 196 aa9.43□□□□□ -0.9
HMGA1P4-201ENST00000428643 MAP4K1Q92918 833 aa9.43□□□□□ -0.9
HMGA1P4-201ENST00000428643 ZBED3Q96IU2 234 aaPredicted RBP9.43□□□□□ -0.9
HMGA1P4-201ENST00000428643 USP26Q9BXU7 913 aa9.43□□□□□ -0.9
HMGA1P4-201ENST00000428643 C22orf23Q9BZE7 217 aa9.43□□□□□ -0.9
HMGA1P4-201ENST00000428643 DCP1AQ9NPI6 582 aaPredicted RBP9.43□□□□□ -0.9
HMGA1P4-201ENST00000428643 ADARB2Q9NS39 739 aaKnown RBP9.43□□□□□ -0.9
HMGA1P4-201ENST00000428643 MCM9Q9NXL9 1143 aa9.43□□□□□ -0.9
HMGA1P4-201ENST00000428643 ZNF70Q9UC06 446 aaPredicted RBP9.43□□□□□ -0.9
HMGA1P4-201ENST00000428643 HACL1Q9UJ83 578 aa9.43□□□□□ -0.9
HMGA1P4-201ENST00000428643 MYH7P12883 1935 aa9.43□□□□□ -0.9
HMGA1P4-201ENST00000428643 ASTN2O75129 1339 aaPredicted RBP9.42□□□□□ -0.9
HMGA1P4-201ENST00000428643 MINDY4BA8MYZ0 360 aa9.42□□□□□ -0.9
HMGA1P4-201ENST00000428643 TCP10L2B9ZVM9 353 aa9.42□□□□□ -0.9
HMGA1P4-201ENST00000428643 SLC27A2O14975 620 aa9.42□□□□□ -0.9
HMGA1P4-201ENST00000428643 EPB41L2O43491 1005 aaKnown RBP9.42□□□□□ -0.9
HMGA1P4-201ENST00000428643 FGAP02671 866 aa9.42□□□□□ -0.9
HMGA1P4-201ENST00000428643 ZKSCAN1P17029 563 aaPredicted RBP9.42□□□□□ -0.9
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