RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 WRNIP1Q96S55 665 aa19.32■□□□□ 0.68
SEC13-210ENST00000428626 TMOD2Q9NZR1 351 aa19.32■□□□□ 0.68
SEC13-210ENST00000428626 CENPFP49454 3210 aa19.32■□□□□ 0.68
SEC13-210ENST00000428626 SALL1Q9NSC2 1324 aa19.31■□□□□ 0.68
SEC13-210ENST00000428626 CCL15-CCL14A0A0B4J2E2 113 aa19.31■□□□□ 0.68
SEC13-210ENST00000428626 MTX1Q13505 466 aa19.31■□□□□ 0.68
SEC13-210ENST00000428626 CCL15Q16663 113 aa19.31■□□□□ 0.68
SEC13-210ENST00000428626 FAM198AQ9UFP1 575 aa19.31■□□□□ 0.68
SEC13-210ENST00000428626 CSADQ9Y600 493 aa19.31■□□□□ 0.68
SEC13-210ENST00000428626 SRGAP3O43295 1099 aa19.3■□□□□ 0.68
SEC13-210ENST00000428626 INPP5BP32019 993 aa19.3■□□□□ 0.68
SEC13-210ENST00000428626 TCP10Q12799 353 aa19.3■□□□□ 0.68
SEC13-210ENST00000428626 TFCP2Q12800 502 aa19.3■□□□□ 0.68
SEC13-210ENST00000428626 RASGRF1Q13972 1273 aa19.3■□□□□ 0.68
SEC13-210ENST00000428626 OTUD7BQ6GQQ9 843 aa19.3■□□□□ 0.68
SEC13-210ENST00000428626 ZFPM1Q8IX07 1006 aa19.3■□□□□ 0.68
SEC13-210ENST00000428626 FAM151AQ8WW52 585 aa19.3■□□□□ 0.68
SEC13-210ENST00000428626 MYH2Q9UKX2 1941 aa19.29■□□□□ 0.68
SEC13-210ENST00000428626 IRF6O14896 467 aa19.29■□□□□ 0.68
SEC13-210ENST00000428626 ZBTB22O15209 634 aa19.29■□□□□ 0.68
SEC13-210ENST00000428626 LDHBP07195 334 aaKnown RBP19.29■□□□□ 0.68
SEC13-210ENST00000428626 GTF2A2P52657 109 aa19.29■□□□□ 0.68
SEC13-210ENST00000428626 CLUAP1Q96AJ1 413 aa19.29■□□□□ 0.68
SEC13-210ENST00000428626 GNL3LQ9NVN8 582 aaKnown RBP19.29■□□□□ 0.68
SEC13-210ENST00000428626 DENND2AQ9ULE3 1009 aa19.29■□□□□ 0.68
SEC13-210ENST00000428626 A0A1B0GUL7 405 aa19.28■□□□□ 0.68
SEC13-210ENST00000428626 SEMA3EO15041 775 aa19.28■□□□□ 0.68
SEC13-210ENST00000428626 GNAI3P08754 354 aa19.28■□□□□ 0.68
SEC13-210ENST00000428626 SP3Q02447 781 aa19.28■□□□□ 0.68
SEC13-210ENST00000428626 ATF7IPQ6VMQ6 1270 aa19.28■□□□□ 0.68
SEC13-210ENST00000428626 ERO1BQ86YB8 467 aa19.28■□□□□ 0.68
SEC13-210ENST00000428626 USP40Q9NVE5 1235 aa19.28■□□□□ 0.68
SEC13-210ENST00000428626 HDAC5Q9UQL6 1122 aa19.28■□□□□ 0.68
SEC13-210ENST00000428626 ZSWIM8A7E2V4 1837 aa19.28■□□□□ 0.68
SEC13-210ENST00000428626 AK9Q5TCS8 1911 aa19.27■□□□□ 0.68
SEC13-210ENST00000428626 KIAA0100Q14667 2235 aaKnown RBP19.27■□□□□ 0.68
SEC13-210ENST00000428626 PNMA6EA0A0J9YXQ4 647 aa19.27■□□□□ 0.68
SEC13-210ENST00000428626 TAF1CQ15572 869 aaPredicted RBP19.27■□□□□ 0.68
SEC13-210ENST00000428626 ZNF384Q8TF68 577 aa19.27■□□□□ 0.68
SEC13-210ENST00000428626 FRAT1Q92837 279 aaPredicted RBP19.27■□□□□ 0.68
SEC13-210ENST00000428626 XAGE2Q96GT9 111 aa19.27■□□□□ 0.68
SEC13-210ENST00000428626 ERO1AQ96HE7 468 aa19.27■□□□□ 0.68
SEC13-210ENST00000428626 ZNF341Q9BYN7 854 aa19.27■□□□□ 0.68
SEC13-210ENST00000428626 ZNF112Q9UJU3 913 aa19.27■□□□□ 0.68
SEC13-210ENST00000428626 PTPN22Q9Y2R2 807 aa19.27■□□□□ 0.68
SEC13-210ENST00000428626 RFX7Q2KHR2 1363 aa19.27■□□□□ 0.68
SEC13-210ENST00000428626 ATRNL1Q5VV63 1379 aa19.27■□□□□ 0.68
SEC13-210ENST00000428626 GAKO14976 1311 aa19.26■□□□□ 0.67
SEC13-210ENST00000428626 BRCA2P51587 3418 aa19.26■□□□□ 0.67
SEC13-210ENST00000428626 BTBD19C9JJ37 291 aa19.26■□□□□ 0.67
SEC13-210ENST00000428626 SLURP2P0DP57 97 aa19.26■□□□□ 0.67
SEC13-210ENST00000428626 DCAF15Q66K64 600 aa19.26■□□□□ 0.67
SEC13-210ENST00000428626 PPIL2Q13356 520 aa19.25■□□□□ 0.67
SEC13-210ENST00000428626 PI16Q6UXB8 463 aa19.25■□□□□ 0.67
SEC13-210ENST00000428626 SH3BP5LQ7L8J4 393 aa19.25■□□□□ 0.67
SEC13-210ENST00000428626 EFCC1Q9HA90 598 aa19.25■□□□□ 0.67
SEC13-210ENST00000428626 MKI67P46013 3256 aaKnown RBP19.25■□□□□ 0.67
SEC13-210ENST00000428626 POTEFA5A3E0 1075 aa19.24■□□□□ 0.67
SEC13-210ENST00000428626 IPO8O15397 1037 aaKnown RBP19.24■□□□□ 0.67
SEC13-210ENST00000428626 CETPP11597 493 aa19.24■□□□□ 0.67
SEC13-210ENST00000428626 RGS3P49796 1198 aa19.24■□□□□ 0.67
SEC13-210ENST00000428626 MIER1Q8N108 512 aa19.24■□□□□ 0.67
SEC13-210ENST00000428626 TMEM57Q8N5G2 664 aa19.24■□□□□ 0.67
SEC13-210ENST00000428626 HOOK2Q96ED9 719 aa19.24■□□□□ 0.67
SEC13-210ENST00000428626 ZFYVE28Q9HCC9 887 aa19.24■□□□□ 0.67
SEC13-210ENST00000428626 DDX4Q9NQI0 724 aaKnown RBP19.24■□□□□ 0.67
SEC13-210ENST00000428626 ABCF2Q9UG63 623 aa19.24■□□□□ 0.67
SEC13-210ENST00000428626 PDS5AQ29RF7 1337 aaKnown RBP19.24■□□□□ 0.67
SEC13-210ENST00000428626 GNAI2P04899 355 aa19.23■□□□□ 0.67
SEC13-210ENST00000428626 PPATQ06203 517 aa19.23■□□□□ 0.67
SEC13-210ENST00000428626 SNAPC2Q13487 334 aa19.23■□□□□ 0.67
SEC13-210ENST00000428626 MOGSQ13724 837 aa19.23■□□□□ 0.67
SEC13-210ENST00000428626 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.23■□□□□ 0.67
SEC13-210ENST00000428626 IDI2Q9BXS1 227 aa19.23■□□□□ 0.67
SEC13-210ENST00000428626 ARHGAP39Q9C0H5 1083 aa19.23■□□□□ 0.67
SEC13-210ENST00000428626 HMG20BQ9P0W2 317 aa19.23■□□□□ 0.67
SEC13-210ENST00000428626 DOCK2Q92608 1830 aa19.23■□□□□ 0.67
SEC13-210ENST00000428626 WDHD1O75717 1129 aaPredicted RBP19.22■□□□□ 0.67
SEC13-210ENST00000428626 NOL9Q5SY16 702 aaKnown RBP19.22■□□□□ 0.67
SEC13-210ENST00000428626 FAM163AQ96GL9 167 aaPredicted RBP19.22■□□□□ 0.67
SEC13-210ENST00000428626 KCNH4Q9UQ05 1017 aa19.22■□□□□ 0.67
SEC13-210ENST00000428626 AKAP2Q9Y2D5 859 aa19.22■□□□□ 0.67
SEC13-210ENST00000428626 DDTLA6NHG4 134 aaPredicted RBP19.21■□□□□ 0.67
SEC13-210ENST00000428626 PHF20L1A8MW92 1017 aa19.21■□□□□ 0.67
SEC13-210ENST00000428626 TLR2O60603 784 aa19.21■□□□□ 0.67
SEC13-210ENST00000428626 MECOMQ03112 1051 aa19.21■□□□□ 0.67
SEC13-210ENST00000428626 MVPQ14764 893 aaKnown RBP19.21■□□□□ 0.67
SEC13-210ENST00000428626 TBC1D9Q6ZT07 1266 aa19.21■□□□□ 0.67
SEC13-210ENST00000428626 DZIP1Q86YF9 867 aaKnown RBP19.21■□□□□ 0.67
SEC13-210ENST00000428626 ZGPATQ8N5A5 531 aaKnown RBP19.21■□□□□ 0.67
SEC13-210ENST00000428626 ARMC5Q96C12 935 aa19.21■□□□□ 0.67
SEC13-210ENST00000428626 NEUROD6Q96NK8 337 aa19.21■□□□□ 0.67
SEC13-210ENST00000428626 ENTPD3O75355 529 aa19.2■□□□□ 0.66
SEC13-210ENST00000428626 BTDP43251 543 aa19.2■□□□□ 0.66
SEC13-210ENST00000428626 RHBDL3P58872 404 aa19.2■□□□□ 0.66
SEC13-210ENST00000428626 ZCCHC17Q9NP64 241 aaKnown RBP19.2■□□□□ 0.66
SEC13-210ENST00000428626 PTCH2Q9Y6C5 1203 aa19.2■□□□□ 0.66
SEC13-210ENST00000428626 MROH7-TTC4A0A0A0MT08 1334 aa19.2■□□□□ 0.66
SEC13-210ENST00000428626 CTGFP29279 349 aa19.19■□□□□ 0.66
SEC13-210ENST00000428626 HNRNPUQ00839 825 aaKnown RBP eCLIP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms