RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 MAPKAPK5Q8IW41 473 aa8.44□□□□□ -1.06
CDC7-203ENST00000428239 TGFBRAP1Q8WUH2 860 aa8.44□□□□□ -1.06
CDC7-203ENST00000428239 NSUN4Q96CB9 384 aaKnown RBP8.44□□□□□ -1.06
CDC7-203ENST00000428239 CRNKL1Q9BZJ0 848 aaKnown RBP8.44□□□□□ -1.06
CDC7-203ENST00000428239 SAP30BPQ9UHR5 308 aaKnown RBP8.44□□□□□ -1.06
CDC7-203ENST00000428239 PDE4AP27815 886 aa8.44□□□□□ -1.06
CDC7-203ENST00000428239 TDO2P48775 406 aa8.44□□□□□ -1.06
CDC7-203ENST00000428239 DYNLL1P63167 89 aaKnown RBP8.44□□□□□ -1.06
CDC7-203ENST00000428239 KIAA1211Q6ZU35 1233 aa8.44□□□□□ -1.06
CDC7-203ENST00000428239 APOBEC3FQ8IUX4 373 aaKnown RBP8.44□□□□□ -1.06
CDC7-203ENST00000428239 ARMT1Q9H993 441 aa8.44□□□□□ -1.06
CDC7-203ENST00000428239 MROH7-TTC4A0A0A0MT08 1334 aa8.44□□□□□ -1.06
CDC7-203ENST00000428239 LRRC37AA6NMS7 1700 aa8.43□□□□□ -1.06
CDC7-203ENST00000428239 ZFYP08048 801 aaPredicted RBP8.43□□□□□ -1.06
CDC7-203ENST00000428239 FKBP1AP62942 108 aaKnown RBP8.43□□□□□ -1.06
CDC7-203ENST00000428239 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.43□□□□□ -1.06
CDC7-203ENST00000428239 ZNF512BQ96KM6 892 aaPredicted RBP8.43□□□□□ -1.06
CDC7-203ENST00000428239 ZNF70Q9UC06 446 aaPredicted RBP8.43□□□□□ -1.06
CDC7-203ENST00000428239 IRS2Q9Y4H2 1338 aa8.43□□□□□ -1.06
CDC7-203ENST00000428239 TRAF5O00463 557 aa8.43□□□□□ -1.06
CDC7-203ENST00000428239 RNF113AO15541 343 aaKnown RBP8.43□□□□□ -1.06
CDC7-203ENST00000428239 RASA3Q14644 834 aa8.43□□□□□ -1.06
CDC7-203ENST00000428239 HHIPL2Q6UWX4 724 aa8.43□□□□□ -1.06
CDC7-203ENST00000428239 PI4K2BQ8TCG2 481 aa8.43□□□□□ -1.06
CDC7-203ENST00000428239 RUFY2Q8WXA3 655 aa8.43□□□□□ -1.06
CDC7-203ENST00000428239 GMLQ99445 158 aa8.43□□□□□ -1.06
CDC7-203ENST00000428239 DEFB129Q9H1M3 183 aa8.43□□□□□ -1.06
CDC7-203ENST00000428239 SLC4A4Q9Y6R1 1079 aa8.43□□□□□ -1.06
CDC7-203ENST00000428239 MINDY4BA8MYZ0 360 aa8.42□□□□□ -1.06
CDC7-203ENST00000428239 CELF2O95319 508 aaKnown RBP8.42□□□□□ -1.06
CDC7-203ENST00000428239 HIRAP54198 1017 aaPredicted RBP8.42□□□□□ -1.06
CDC7-203ENST00000428239 TTC22Q5TAA0 569 aa8.42□□□□□ -1.06
CDC7-203ENST00000428239 NACAP1Q9BZK3 213 aa8.42□□□□□ -1.06
CDC7-203ENST00000428239 COL1A1P02452 1464 aaPredicted RBP8.42□□□□□ -1.06
CDC7-203ENST00000428239 CHGBP05060 677 aa8.42□□□□□ -1.06
CDC7-203ENST00000428239 HLA-DOAP06340 250 aa8.42□□□□□ -1.06
CDC7-203ENST00000428239 ZNF280AP59817 542 aaPredicted RBP8.42□□□□□ -1.06
CDC7-203ENST00000428239 HDLBPQ00341 1268 aaKnown RBP8.42□□□□□ -1.06
CDC7-203ENST00000428239 CDC42EP5Q6NZY7 148 aa8.42□□□□□ -1.06
CDC7-203ENST00000428239 DLK2Q6UY11 383 aa8.42□□□□□ -1.06
CDC7-203ENST00000428239 SH3RF3Q8TEJ3 882 aaPredicted RBP8.42□□□□□ -1.06
CDC7-203ENST00000428239 ZDHHC15Q96MV8 337 aa8.42□□□□□ -1.06
CDC7-203ENST00000428239 MCM9Q9NXL9 1143 aa8.42□□□□□ -1.06
CDC7-203ENST00000428239 SALL1Q9NSC2 1324 aa8.42□□□□□ -1.06
CDC7-203ENST00000428239 HIP1O00291 1037 aa8.42□□□□□ -1.06
CDC7-203ENST00000428239 PPP1R12BO60237 982 aaPredicted RBP8.42□□□□□ -1.06
CDC7-203ENST00000428239 SDSP20132 328 aa8.42□□□□□ -1.06
CDC7-203ENST00000428239 SDR42E1Q8WUS8 393 aa8.42□□□□□ -1.06
CDC7-203ENST00000428239 APPBP2Q92624 585 aa8.42□□□□□ -1.06
CDC7-203ENST00000428239 TMEM39BQ9GZU3 492 aa8.42□□□□□ -1.06
CDC7-203ENST00000428239 STAP2Q9UGK3 403 aa8.42□□□□□ -1.06
CDC7-203ENST00000428239 ISY1Q9ULR0 285 aaKnown RBP8.42□□□□□ -1.06
CDC7-203ENST00000428239 KIF3CO14782 793 aa8.41□□□□□ -1.06
CDC7-203ENST00000428239 ADD2P35612 726 aa8.41□□□□□ -1.06
CDC7-203ENST00000428239 SUPT20HL1Q3ZLR7 823 aa8.41□□□□□ -1.06
CDC7-203ENST00000428239 MIGA2Q7L4E1 593 aa8.41□□□□□ -1.06
CDC7-203ENST00000428239 CSRNP1Q96S65 589 aa8.41□□□□□ -1.06
CDC7-203ENST00000428239 PDS5AQ29RF7 1337 aaKnown RBP8.41□□□□□ -1.06
CDC7-203ENST00000428239 POTECB2RU33 542 aa8.41□□□□□ -1.06
CDC7-203ENST00000428239 TULP1O00294 542 aaPredicted RBP8.41□□□□□ -1.06
CDC7-203ENST00000428239 CCDC129Q6ZRS4 1044 aa8.41□□□□□ -1.06
CDC7-203ENST00000428239 TIAM2Q8IVF5 1701 aa8.41□□□□□ -1.06
CDC7-203ENST00000428239 ZC3H15Q8WU90 426 aaKnown RBP8.41□□□□□ -1.06
CDC7-203ENST00000428239 SEC62Q99442 399 aaKnown RBP8.41□□□□□ -1.06
CDC7-203ENST00000428239 NAPBQ9H115 298 aa8.41□□□□□ -1.06
CDC7-203ENST00000428239 AOX1Q06278 1338 aa8.41□□□□□ -1.06
CDC7-203ENST00000428239 GPAA1O43292 621 aa8.41□□□□□ -1.06
CDC7-203ENST00000428239 RAD21O60216 631 aa8.41□□□□□ -1.06
CDC7-203ENST00000428239 MMP14P50281 582 aa8.41□□□□□ -1.06
CDC7-203ENST00000428239 MFAP1P55081 439 aaKnown RBP8.41□□□□□ -1.06
CDC7-203ENST00000428239 FMR1Q06787 632 aaKnown RBP eCLIP8.41□□□□□ -1.06
CDC7-203ENST00000428239 NFIAQ12857 509 aa8.41□□□□□ -1.06
CDC7-203ENST00000428239 NMIQ13287 307 aaPredicted RBP8.41□□□□□ -1.06
CDC7-203ENST00000428239 APOBEC3HQ6NTF7 200 aaKnown RBP8.41□□□□□ -1.06
CDC7-203ENST00000428239 LCORLQ8N3X6 602 aa8.41□□□□□ -1.06
CDC7-203ENST00000428239 C2orf69Q8N8R5 385 aa8.41□□□□□ -1.06
CDC7-203ENST00000428239 FAM227BQ96M60 508 aa8.41□□□□□ -1.06
CDC7-203ENST00000428239 ANGEL1Q9UNK9 670 aaKnown RBP8.41□□□□□ -1.06
CDC7-203ENST00000428239 ANO2Q9NQ90 1003 aa8.4□□□□□ -1.06
CDC7-203ENST00000428239 SBF1O95248 1867 aa8.4□□□□□ -1.06
CDC7-203ENST00000428239 MPHOSPH10O00566 681 aaKnown RBP8.4□□□□□ -1.07
CDC7-203ENST00000428239 UBE3CQ15386 1083 aa8.4□□□□□ -1.07
CDC7-203ENST00000428239 SPDYE2Q495Y8 402 aa8.4□□□□□ -1.07
CDC7-203ENST00000428239 ADGRA1Q86SQ6 560 aa8.4□□□□□ -1.07
CDC7-203ENST00000428239 CERS3Q8IU89 383 aa8.4□□□□□ -1.07
CDC7-203ENST00000428239 PUS7LQ9H0K6 701 aaKnown RBP8.4□□□□□ -1.07
CDC7-203ENST00000428239 PALD1Q9ULE6 856 aa8.4□□□□□ -1.07
CDC7-203ENST00000428239 SCN9AQ15858 1988 aa8.4□□□□□ -1.07
CDC7-203ENST00000428239 GPR75-ASB3A0A0A6YYF3 556 aa8.39□□□□□ -1.07
CDC7-203ENST00000428239 PRKAB2O43741 272 aa8.39□□□□□ -1.07
CDC7-203ENST00000428239 MKRN3Q13064 507 aaKnown RBP8.39□□□□□ -1.07
CDC7-203ENST00000428239 RRP12Q5JTH9 1297 aaKnown RBP8.39□□□□□ -1.07
CDC7-203ENST00000428239 RBM46Q8TBY0 533 aaKnown RBP8.39□□□□□ -1.07
CDC7-203ENST00000428239 HOOK2Q96ED9 719 aa8.39□□□□□ -1.07
CDC7-203ENST00000428239 CDCA5Q96FF9 252 aa8.39□□□□□ -1.07
CDC7-203ENST00000428239 FAM196BA6NMK8 535 aa8.39□□□□□ -1.07
CDC7-203ENST00000428239 GSPT1P15170 499 aaKnown RBP8.39□□□□□ -1.07
CDC7-203ENST00000428239 ATP2B2Q01814 1243 aa8.39□□□□□ -1.07
CDC7-203ENST00000428239 MCMDC2Q4G0Z9 681 aa8.39□□□□□ -1.07
CDC7-203ENST00000428239 NBPF12Q5TAG4 269 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms