RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 USP40Q9NVE5 1235 aa11.21□□□□□ -0.62
CLTCL1-202ENST00000427926 RASAL2Q9UJF2 1139 aa11.21□□□□□ -0.62
CLTCL1-202ENST00000427926 CCT6AP40227 531 aaKnown RBP11.2□□□□□ -0.62
CLTCL1-202ENST00000427926 NMIQ13287 307 aaPredicted RBP11.2□□□□□ -0.62
CLTCL1-202ENST00000427926 GNPTABQ3T906 1256 aa11.2□□□□□ -0.62
CLTCL1-202ENST00000427926 NLRX1Q86UT6 975 aa11.2□□□□□ -0.62
CLTCL1-202ENST00000427926 NSMCE1Q8WV22 266 aa11.2□□□□□ -0.62
CLTCL1-202ENST00000427926 GTF3C6Q969F1 213 aa11.2□□□□□ -0.62
CLTCL1-202ENST00000427926 ANO3Q9BYT9 981 aa11.2□□□□□ -0.62
CLTCL1-202ENST00000427926 CFAP74Q9C0B2 1584 aa11.2□□□□□ -0.62
CLTCL1-202ENST00000427926 ABCC1P33527 1531 aa11.2□□□□□ -0.62
CLTCL1-202ENST00000427926 BICDL2A1A5D9 508 aa11.2□□□□□ -0.62
CLTCL1-202ENST00000427926 MYCP01106 439 aaPredicted RBP11.2□□□□□ -0.62
CLTCL1-202ENST00000427926 ARMC9Q7Z3E5 817 aa11.2□□□□□ -0.62
CLTCL1-202ENST00000427926 NCAPG2Q86XI2 1143 aa11.2□□□□□ -0.62
CLTCL1-202ENST00000427926 ZKSCAN3Q9BRR0 538 aa11.2□□□□□ -0.62
CLTCL1-202ENST00000427926 TCP10L2B9ZVM9 353 aa11.2□□□□□ -0.62
CLTCL1-202ENST00000427926 DPP9Q86TI2 863 aa11.2□□□□□ -0.62
CLTCL1-202ENST00000427926 GSDMBQ8TAX9 411 aa11.2□□□□□ -0.62
CLTCL1-202ENST00000427926 TCEANC2Q96MN5 208 aa11.2□□□□□ -0.62
CLTCL1-202ENST00000427926 CFBP00751 764 aa11.2□□□□□ -0.62
CLTCL1-202ENST00000427926 CYLC1P35663 651 aaPredicted RBP11.2□□□□□ -0.62
CLTCL1-202ENST00000427926 ARHGAP45Q92619 1136 aa11.2□□□□□ -0.62
CLTCL1-202ENST00000427926 BICC1Q9H694 974 aaKnown RBP11.2□□□□□ -0.62
CLTCL1-202ENST00000427926 TRPC6Q9Y210 931 aa11.2□□□□□ -0.62
CLTCL1-202ENST00000427926 SHTN1A0MZ66 631 aa11.19□□□□□ -0.62
CLTCL1-202ENST00000427926 TAF5LO75529 589 aa11.19□□□□□ -0.62
CLTCL1-202ENST00000427926 DCAF17Q5H9S7 520 aaPredicted RBP11.19□□□□□ -0.62
CLTCL1-202ENST00000427926 LMBR1Q8WVP7 490 aa11.19□□□□□ -0.62
CLTCL1-202ENST00000427926 CCDC114Q96M63 670 aa11.19□□□□□ -0.62
CLTCL1-202ENST00000427926 SELENOOQ9BVL4 669 aa11.19□□□□□ -0.62
CLTCL1-202ENST00000427926 ATP6V0A2Q9Y487 856 aa11.19□□□□□ -0.62
CLTCL1-202ENST00000427926 EYA2O00167 538 aa11.19□□□□□ -0.62
CLTCL1-202ENST00000427926 CCDC175P0C221 793 aa11.19□□□□□ -0.62
CLTCL1-202ENST00000427926 ATP10AO60312 1499 aa11.19□□□□□ -0.62
CLTCL1-202ENST00000427926 MFSD14BQ5SR56 506 aa11.19□□□□□ -0.62
CLTCL1-202ENST00000427926 MAATS1Q7Z4T9 603 aa11.19□□□□□ -0.62
CLTCL1-202ENST00000427926 MAPKAPK5Q8IW41 473 aa11.19□□□□□ -0.62
CLTCL1-202ENST00000427926 METTL13Q8N6R0 699 aa11.19□□□□□ -0.62
CLTCL1-202ENST00000427926 NECAB1Q8N987 351 aa11.19□□□□□ -0.62
CLTCL1-202ENST00000427926 MAP3K19Q56UN5 1328 aa11.19□□□□□ -0.62
CLTCL1-202ENST00000427926 CKAP4Q07065 602 aaKnown RBP11.19□□□□□ -0.62
CLTCL1-202ENST00000427926 CCDC125Q86Z20 511 aa11.19□□□□□ -0.62
CLTCL1-202ENST00000427926 CHURC1Q8WUH1 139 aa11.19□□□□□ -0.62
CLTCL1-202ENST00000427926 ARMT1Q9H993 441 aa11.19□□□□□ -0.62
CLTCL1-202ENST00000427926 POLKQ9UBT6 870 aa11.19□□□□□ -0.62
CLTCL1-202ENST00000427926 CD2APQ9Y5K6 639 aa11.19□□□□□ -0.62
CLTCL1-202ENST00000427926 YEATS2Q9ULM3 1422 aa11.19□□□□□ -0.62
CLTCL1-202ENST00000427926 A1BGP04217 495 aa11.19□□□□□ -0.62
CLTCL1-202ENST00000427926 ABI1Q8IZP0 508 aa11.19□□□□□ -0.62
CLTCL1-202ENST00000427926 CCDC155Q8N6L0 562 aa11.19□□□□□ -0.62
CLTCL1-202ENST00000427926 KIFAP3Q92845 792 aa11.19□□□□□ -0.62
CLTCL1-202ENST00000427926 RAD50Q92878 1312 aa11.19□□□□□ -0.62
CLTCL1-202ENST00000427926 KRT19P08727 400 aa11.18□□□□□ -0.62
CLTCL1-202ENST00000427926 MARCKSP29966 332 aaPredicted RBP11.18□□□□□ -0.62
CLTCL1-202ENST00000427926 ANKRD35Q8N283 1001 aa11.18□□□□□ -0.62
CLTCL1-202ENST00000427926 PLIN2Q99541 437 aa11.18□□□□□ -0.62
CLTCL1-202ENST00000427926 CCDC77Q9BR77 488 aa11.18□□□□□ -0.62
CLTCL1-202ENST00000427926 RIOK1Q9BRS2 568 aaKnown RBP11.18□□□□□ -0.62
CLTCL1-202ENST00000427926 SLC52A2Q9HAB3 445 aa11.18□□□□□ -0.62
CLTCL1-202ENST00000427926 EPB41P11171 864 aaKnown RBP11.18□□□□□ -0.62
CLTCL1-202ENST00000427926 GSDMDP57764 484 aa11.18□□□□□ -0.62
CLTCL1-202ENST00000427926 SV2BQ7L1I2 683 aa11.18□□□□□ -0.62
CLTCL1-202ENST00000427926 STK24Q9Y6E0 443 aa11.18□□□□□ -0.62
CLTCL1-202ENST00000427926 PARD3Q8TEW0 1356 aa11.18□□□□□ -0.62
CLTCL1-202ENST00000427926 TTC41PQ6P2S7 1318 aa11.18□□□□□ -0.62
CLTCL1-202ENST00000427926 OSBPP22059 807 aa11.18□□□□□ -0.62
CLTCL1-202ENST00000427926 RPS8P62241 208 aaKnown RBP11.18□□□□□ -0.62
CLTCL1-202ENST00000427926 FMNL3Q8IVF7 1028 aa11.18□□□□□ -0.62
CLTCL1-202ENST00000427926 C8orf58Q8NAV2 365 aa11.18□□□□□ -0.62
CLTCL1-202ENST00000427926 KIF18AQ8NI77 898 aa11.18□□□□□ -0.62
CLTCL1-202ENST00000427926 A0A1B0GUL7 405 aa11.18□□□□□ -0.62
CLTCL1-202ENST00000427926 ESPNB1AK53 854 aa11.18□□□□□ -0.62
CLTCL1-202ENST00000427926 CEP135Q66GS9 1140 aa11.18□□□□□ -0.62
CLTCL1-202ENST00000427926 NCAPH2Q6IBW4 605 aa11.18□□□□□ -0.62
CLTCL1-202ENST00000427926 TGFBRAP1Q8WUH2 860 aa11.18□□□□□ -0.62
CLTCL1-202ENST00000427926 POLR3AO14802 1390 aaPredicted RBP11.17□□□□□ -0.62
CLTCL1-202ENST00000427926 ZEB2O60315 1214 aa11.17□□□□□ -0.62
CLTCL1-202ENST00000427926 DOK7Q18PE1 504 aa11.17□□□□□ -0.62
CLTCL1-202ENST00000427926 TBC1D9Q6ZT07 1266 aa11.17□□□□□ -0.62
CLTCL1-202ENST00000427926 NEK11Q8NG66 645 aa11.17□□□□□ -0.62
CLTCL1-202ENST00000427926 PRPF31Q8WWY3 499 aaKnown RBP11.17□□□□□ -0.62
CLTCL1-202ENST00000427926 ATP2B4P23634 1241 aa11.17□□□□□ -0.62
CLTCL1-202ENST00000427926 KCTD2Q14681 263 aa11.17□□□□□ -0.62
CLTCL1-202ENST00000427926 ARHGEF16Q5VV41 709 aa11.17□□□□□ -0.62
CLTCL1-202ENST00000427926 MAEAQ7L5Y9 396 aa11.17□□□□□ -0.62
CLTCL1-202ENST00000427926 KIAA0825Q8IV33 1275 aa11.17□□□□□ -0.62
CLTCL1-202ENST00000427926 METTL22Q9BUU2 404 aaPredicted RBP11.17□□□□□ -0.62
CLTCL1-202ENST00000427926 LRFN2Q9ULH4 789 aa11.17□□□□□ -0.62
CLTCL1-202ENST00000427926 ABL1P00519 1130 aa11.17□□□□□ -0.62
CLTCL1-202ENST00000427926 KRT9P35527 623 aa11.17□□□□□ -0.62
CLTCL1-202ENST00000427926 LPIN2Q92539 896 aa11.17□□□□□ -0.62
CLTCL1-202ENST00000427926 CARD10Q9BWT7 1032 aa11.17□□□□□ -0.62
CLTCL1-202ENST00000427926 AP5M1Q9H0R1 490 aa11.17□□□□□ -0.62
CLTCL1-202ENST00000427926 DISP1Q96F81 1524 aa11.17□□□□□ -0.62
CLTCL1-202ENST00000427926 PRPF6O94906 941 aaKnown RBP11.17□□□□□ -0.62
CLTCL1-202ENST00000427926 ATP2A2P16615 1042 aaKnown RBP11.17□□□□□ -0.62
CLTCL1-202ENST00000427926 RXRAP19793 462 aa11.17□□□□□ -0.62
CLTCL1-202ENST00000427926 SUPT20HL1Q3ZLR7 823 aa11.17□□□□□ -0.62
CLTCL1-202ENST00000427926 C6orf163Q5TEZ5 329 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms