RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 DYNLL1P63167 89 aaKnown RBP31.36■■■□□ 2.61
SH3GL3-202ENST00000427482 TBC1D16Q8TBP0 767 aa31.36■■■□□ 2.61
SH3GL3-202ENST00000427482 JAG2Q9Y219 1238 aa31.36■■■□□ 2.61
SH3GL3-202ENST00000427482 CTDSPL2Q05D32 466 aa31.35■■■□□ 2.61
SH3GL3-202ENST00000427482 LARP1BQ659C4 914 aaKnown RBP31.35■■■□□ 2.61
SH3GL3-202ENST00000427482 POLLQ9UGP5 575 aa31.35■■■□□ 2.61
SH3GL3-202ENST00000427482 ATP6V0A2Q9Y487 856 aa31.35■■■□□ 2.61
SH3GL3-202ENST00000427482 JAK2O60674 1132 aa31.35■■■□□ 2.61
SH3GL3-202ENST00000427482 AKNAD1Q5T1N1 836 aa31.35■■■□□ 2.61
SH3GL3-202ENST00000427482 CYB5R4Q7L1T6 521 aa31.35■■■□□ 2.61
SH3GL3-202ENST00000427482 SMARCC2Q8TAQ2 1214 aa31.35■■■□□ 2.61
SH3GL3-202ENST00000427482 SDR42E1Q8WUS8 393 aa31.35■■■□□ 2.61
SH3GL3-202ENST00000427482 NKX2-3Q8TAU0 364 aa31.34■■■□□ 2.61
SH3GL3-202ENST00000427482 CD209Q9NNX6 404 aa31.34■■■□□ 2.61
SH3GL3-202ENST00000427482 STK32BQ9NY57 414 aa31.34■■■□□ 2.61
SH3GL3-202ENST00000427482 LAMB1P07942 1786 aa31.33■■■□□ 2.61
SH3GL3-202ENST00000427482 B4E1Z4 1266 aa31.33■■■□□ 2.61
SH3GL3-202ENST00000427482 IL1R1P14778 569 aa31.33■■■□□ 2.61
SH3GL3-202ENST00000427482 STAG1Q8WVM7 1258 aa31.33■■■□□ 2.61
SH3GL3-202ENST00000427482 CNNM2Q9H8M5 875 aa31.33■■■□□ 2.61
SH3GL3-202ENST00000427482 NSUN7Q8NE18 718 aaKnown RBP31.33■■■□□ 2.61
SH3GL3-202ENST00000427482 CHMP4CQ96CF2 233 aa31.33■■■□□ 2.61
SH3GL3-202ENST00000427482 TACC3Q9Y6A5 838 aa31.33■■■□□ 2.61
SH3GL3-202ENST00000427482 ALDH1B1P30837 517 aa31.32■■■□□ 2.6
SH3GL3-202ENST00000427482 DZIP1Q86YF9 867 aaKnown RBP31.32■■■□□ 2.6
SH3GL3-202ENST00000427482 MYH2Q9UKX2 1941 aa31.31■■■□□ 2.6
SH3GL3-202ENST00000427482 VPS37CA5D8V6 355 aaPredicted RBP31.31■■■□□ 2.6
SH3GL3-202ENST00000427482 MASTLQ96GX5 879 aa31.31■■■□□ 2.6
SH3GL3-202ENST00000427482 BRPF3Q9ULD4 1205 aa31.31■■■□□ 2.6
SH3GL3-202ENST00000427482 NAP1L2Q9ULW6 460 aaPredicted RBP31.31■■■□□ 2.6
SH3GL3-202ENST00000427482 SH2B2O14492 632 aaPredicted RBP31.31■■■□□ 2.6
SH3GL3-202ENST00000427482 PRPF40AO75400 957 aaKnown RBP31.31■■■□□ 2.6
SH3GL3-202ENST00000427482 CTDNEP1O95476 244 aa31.31■■■□□ 2.6
SH3GL3-202ENST00000427482 LDHBP07195 334 aaKnown RBP31.31■■■□□ 2.6
SH3GL3-202ENST00000427482 CCT2P78371 535 aaKnown RBP31.31■■■□□ 2.6
SH3GL3-202ENST00000427482 PPARAQ07869 468 aa31.31■■■□□ 2.6
SH3GL3-202ENST00000427482 KLHL40Q2TBA0 621 aa31.31■■■□□ 2.6
SH3GL3-202ENST00000427482 GIMAP6Q6P9H5 292 aa31.31■■■□□ 2.6
SH3GL3-202ENST00000427482 MFSD6Q6ZSS7 791 aa31.31■■■□□ 2.6
SH3GL3-202ENST00000427482 KRT23Q9C075 422 aa31.31■■■□□ 2.6
SH3GL3-202ENST00000427482 INCENPQ9NQS7 918 aa31.31■■■□□ 2.6
SH3GL3-202ENST00000427482 ANAPC4Q9UJX5 808 aa31.31■■■□□ 2.6
SH3GL3-202ENST00000427482 ANGEL1Q9UNK9 670 aaKnown RBP31.31■■■□□ 2.6
SH3GL3-202ENST00000427482 ATP6V1DQ9Y5K8 247 aa31.31■■■□□ 2.6
SH3GL3-202ENST00000427482 KLF18A0A0U1RQI7 1052 aa31.3■■■□□ 2.6
SH3GL3-202ENST00000427482 TMEM87BQ96K49 555 aa31.3■■■□□ 2.6
SH3GL3-202ENST00000427482 C6orf229H3BNL8 230 aa31.29■■■□□ 2.6
SH3GL3-202ENST00000427482 NCOA5Q9HCD5 579 aaKnown RBP31.29■■■□□ 2.6
SH3GL3-202ENST00000427482 AATFQ9NY61 560 aaKnown RBP eCLIP31.29■■■□□ 2.6
SH3GL3-202ENST00000427482 DDX49Q9Y6V7 483 aaKnown RBP31.29■■■□□ 2.6
SH3GL3-202ENST00000427482 HMGN5P82970 282 aaKnown RBP31.28■■■□□ 2.6
SH3GL3-202ENST00000427482 GZF1Q9H116 711 aaPredicted RBP31.28■■■□□ 2.6
SH3GL3-202ENST00000427482 RNF41Q9H4P4 317 aaPredicted RBP31.28■■■□□ 2.6
SH3GL3-202ENST00000427482 CRNKL1Q9BZJ0 848 aaKnown RBP31.28■■■□□ 2.6
SH3GL3-202ENST00000427482 HPS5Q9UPZ3 1129 aa31.28■■■□□ 2.6
SH3GL3-202ENST00000427482 PTPDC1A2A3K4 754 aa31.27■■■□□ 2.6
SH3GL3-202ENST00000427482 GOLGA8BA8MQT2 603 aa31.27■■■□□ 2.6
SH3GL3-202ENST00000427482 FOXD4L6Q3SYB3 417 aaPredicted RBP31.27■■■□□ 2.6
SH3GL3-202ENST00000427482 FOXD4L3Q6VB84 417 aaPredicted RBP31.27■■■□□ 2.6
SH3GL3-202ENST00000427482 CDC37L1Q7L3B6 337 aa31.27■■■□□ 2.6
SH3GL3-202ENST00000427482 KDM4AO75164 1064 aa31.26■■■□□ 2.6
SH3GL3-202ENST00000427482 IGDCC4Q8TDY8 1250 aa31.26■■■□□ 2.6
SH3GL3-202ENST00000427482 DDX11Q96FC9 970 aa31.26■■■□□ 2.6
SH3GL3-202ENST00000427482 ZSWIM5Q9P217 1185 aa31.26■■■□□ 2.6
SH3GL3-202ENST00000427482 GSTO1P78417 241 aa31.26■■■□□ 2.59
SH3GL3-202ENST00000427482 MINDY4BA8MYZ0 360 aa31.25■■■□□ 2.59
SH3GL3-202ENST00000427482 GRIK5Q16478 980 aa31.25■■■□□ 2.59
SH3GL3-202ENST00000427482 FAM184AQ8NB25 1140 aa31.24■■■□□ 2.59
SH3GL3-202ENST00000427482 C2CD5Q86YS7 1000 aa31.24■■■□□ 2.59
SH3GL3-202ENST00000427482 MPNDQ8N594 471 aa31.24■■■□□ 2.59
SH3GL3-202ENST00000427482 TMEM87AQ8NBN3 555 aa31.24■■■□□ 2.59
SH3GL3-202ENST00000427482 CDK5RAP2Q96SN8 1893 aa31.24■■■□□ 2.59
SH3GL3-202ENST00000427482 LY9Q9HBG7 655 aa31.24■■■□□ 2.59
SH3GL3-202ENST00000427482 ATP8A2Q9NTI2 1148 aa31.24■■■□□ 2.59
SH3GL3-202ENST00000427482 KIF3AQ9Y496 699 aa31.24■■■□□ 2.59
SH3GL3-202ENST00000427482 BAG6P46379 1132 aa31.23■■■□□ 2.59
SH3GL3-202ENST00000427482 SGMS1Q86VZ5 419 aa31.23■■■□□ 2.59
SH3GL3-202ENST00000427482 DHX16O60231 1041 aaKnown RBP31.22■■■□□ 2.59
SH3GL3-202ENST00000427482 LIFRP42702 1097 aa31.22■■■□□ 2.59
SH3GL3-202ENST00000427482 TMEM67Q5HYA8 995 aa31.22■■■□□ 2.59
SH3GL3-202ENST00000427482 CTR9Q6PD62 1173 aa31.22■■■□□ 2.59
SH3GL3-202ENST00000427482 MTA3Q9BTC8 594 aa31.22■■■□□ 2.59
SH3GL3-202ENST00000427482 DCP1AQ9NPI6 582 aaPredicted RBP31.22■■■□□ 2.59
SH3GL3-202ENST00000427482 NAV1Q8NEY1 1877 aa31.22■■■□□ 2.59
SH3GL3-202ENST00000427482 SF3B2Q13435 895 aaKnown RBP31.21■■■□□ 2.59
SH3GL3-202ENST00000427482 RRP12Q5JTH9 1297 aaKnown RBP31.21■■■□□ 2.59
SH3GL3-202ENST00000427482 STYK1Q6J9G0 422 aa31.21■■■□□ 2.59
SH3GL3-202ENST00000427482 OLFM4Q6UX06 510 aa31.21■■■□□ 2.59
SH3GL3-202ENST00000427482 ZNF622Q969S3 477 aaKnown RBP eCLIP31.21■■■□□ 2.595e-6■■□□□ 11.6
SH3GL3-202ENST00000427482 CNPY2Q9Y2B0 182 aa31.21■■■□□ 2.59
SH3GL3-202ENST00000427482 FAM205AQ6ZU69 1335 aa31.21■■■□□ 2.59
SH3GL3-202ENST00000427482 SLX4Q8IY92 1834 aa31.21■■■□□ 2.59
SH3GL3-202ENST00000427482 MYH15Q9Y2K3 1946 aa31.21■■■□□ 2.59
SH3GL3-202ENST00000427482 GPT2Q8TD30 523 aa31.21■■■□□ 2.59
SH3GL3-202ENST00000427482 COA1Q9GZY4 146 aa31.21■■■□□ 2.59
SH3GL3-202ENST00000427482 SENP2Q9HC62 589 aa31.21■■■□□ 2.59
SH3GL3-202ENST00000427482 TOMM22Q9NS69 142 aa31.21■■■□□ 2.59
SH3GL3-202ENST00000427482 H0YIN7 160 aa31.2■■■□□ 2.59
SH3GL3-202ENST00000427482 IFIT3O14879 490 aaKnown RBP31.2■■■□□ 2.59
SH3GL3-202ENST00000427482 LDHCP07864 332 aa31.2■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms