RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 HPS5Q9UPZ3 1129 aa25.57■■□□□ 1.68
CNEP1R1-202ENST00000427478 SH2B2O14492 632 aaPredicted RBP25.56■■□□□ 1.68
CNEP1R1-202ENST00000427478 UBE2HP62256 183 aa25.56■■□□□ 1.68
CNEP1R1-202ENST00000427478 KRT85P78386 507 aa25.56■■□□□ 1.68
CNEP1R1-202ENST00000427478 RIOK1Q9BRS2 568 aaKnown RBP25.56■■□□□ 1.68
CNEP1R1-202ENST00000427478 KIF3AQ9Y496 699 aa25.56■■□□□ 1.68
CNEP1R1-202ENST00000427478 TACC3Q9Y6A5 838 aa25.56■■□□□ 1.68
CNEP1R1-202ENST00000427478 BAZ2AQ9UIF9 1905 aaKnown RBP25.56■■□□□ 1.68
CNEP1R1-202ENST00000427478 DYNLL1P63167 89 aaKnown RBP25.55■■□□□ 1.68
CNEP1R1-202ENST00000427478 CRY2Q49AN0 593 aa25.55■■□□□ 1.68
CNEP1R1-202ENST00000427478 AKNAD1Q5T1N1 836 aa25.55■■□□□ 1.68
CNEP1R1-202ENST00000427478 JAG2Q9Y219 1238 aa25.55■■□□□ 1.68
CNEP1R1-202ENST00000427478 XDHP47989 1333 aa25.54■■□□□ 1.68
CNEP1R1-202ENST00000427478 RESTQ13127 1097 aa25.54■■□□□ 1.68
CNEP1R1-202ENST00000427478 LEMD3Q9Y2U8 911 aa25.54■■□□□ 1.68
CNEP1R1-202ENST00000427478 SYCE3A1L190 88 aa25.54■■□□□ 1.68
CNEP1R1-202ENST00000427478 POLRMTO00411 1230 aaKnown RBP25.54■■□□□ 1.68
CNEP1R1-202ENST00000427478 MECOMQ03112 1051 aa25.54■■□□□ 1.68
CNEP1R1-202ENST00000427478 ZNF827Q17R98 1081 aa25.54■■□□□ 1.68
CNEP1R1-202ENST00000427478 MFSD6Q6ZSS7 791 aa25.54■■□□□ 1.68
CNEP1R1-202ENST00000427478 STK11IPQ8N1F8 1099 aa25.54■■□□□ 1.68
CNEP1R1-202ENST00000427478 SYAP1Q96A49 352 aaPredicted RBP25.54■■□□□ 1.68
CNEP1R1-202ENST00000427478 NSUN4Q96CB9 384 aaKnown RBP25.54■■□□□ 1.68
CNEP1R1-202ENST00000427478 CNNM2Q9H8M5 875 aa25.54■■□□□ 1.68
CNEP1R1-202ENST00000427478 KDM4AO75164 1064 aa25.53■■□□□ 1.68
CNEP1R1-202ENST00000427478 TMEM87BQ96K49 555 aa25.53■■□□□ 1.68
CNEP1R1-202ENST00000427478 PRDX5P30044 214 aa25.52■■□□□ 1.68
CNEP1R1-202ENST00000427478 RRP12Q5JTH9 1297 aaKnown RBP25.52■■□□□ 1.68
CNEP1R1-202ENST00000427478 STAG1Q8WVM7 1258 aa25.52■■□□□ 1.68
CNEP1R1-202ENST00000427478 RBM17Q96I25 401 aaKnown RBP25.52■■□□□ 1.68
CNEP1R1-202ENST00000427478 KRT23Q9C075 422 aa25.52■■□□□ 1.68
CNEP1R1-202ENST00000427478 SENP2Q9HC62 589 aa25.52■■□□□ 1.68
CNEP1R1-202ENST00000427478 ZSWIM5Q9P217 1185 aa25.52■■□□□ 1.68
CNEP1R1-202ENST00000427478 DHX16O60231 1041 aaKnown RBP25.52■■□□□ 1.68
CNEP1R1-202ENST00000427478 APBA3O96018 575 aa25.52■■□□□ 1.68
CNEP1R1-202ENST00000427478 GPR101Q96P66 508 aaPredicted RBP25.52■■□□□ 1.68
CNEP1R1-202ENST00000427478 TOMM22Q9NS69 142 aa25.52■■□□□ 1.68
CNEP1R1-202ENST00000427478 FDPSP14324 419 aaKnown RBP25.51■■□□□ 1.67
CNEP1R1-202ENST00000427478 PPARAQ07869 468 aa25.51■■□□□ 1.67
CNEP1R1-202ENST00000427478 TTC6Q86TZ1 520 aa25.51■■□□□ 1.67
CNEP1R1-202ENST00000427478 IGDCC4Q8TDY8 1250 aa25.51■■□□□ 1.67
CNEP1R1-202ENST00000427478 MINDY4BA8MYZ0 360 aa25.51■■□□□ 1.67
CNEP1R1-202ENST00000427478 GPSM2P81274 684 aa25.51■■□□□ 1.67
CNEP1R1-202ENST00000427478 TMEM67Q5HYA8 995 aa25.51■■□□□ 1.67
CNEP1R1-202ENST00000427478 CPLX1O14810 134 aa25.5■■□□□ 1.67
CNEP1R1-202ENST00000427478 ANKRD31Q8N7Z5 1873 aa25.5■■□□□ 1.67
CNEP1R1-202ENST00000427478 ZSCAN16Q9H4T2 348 aaPredicted RBP25.5■■□□□ 1.67
CNEP1R1-202ENST00000427478 LY9Q9HBG7 655 aa25.5■■□□□ 1.67
CNEP1R1-202ENST00000427478 KIAA1551Q9HCM1 1747 aa25.5■■□□□ 1.67
CNEP1R1-202ENST00000427478 TFIP11Q9UBB9 837 aaKnown RBP25.5■■□□□ 1.67
CNEP1R1-202ENST00000427478 PLSCR1O15162 318 aa25.49■■□□□ 1.67
CNEP1R1-202ENST00000427478 HMGB2P26583 209 aaKnown RBP25.49■■□□□ 1.67
CNEP1R1-202ENST00000427478 RXRAP19793 462 aa25.49■■□□□ 1.67
CNEP1R1-202ENST00000427478 GUCY1B3Q02153 619 aa25.49■■□□□ 1.67
CNEP1R1-202ENST00000427478 APOA5Q6Q788 366 aa25.49■■□□□ 1.67
CNEP1R1-202ENST00000427478 LRSAM1Q6UWE0 723 aa25.49■■□□□ 1.67
CNEP1R1-202ENST00000427478 NFXL1Q6ZNB6 911 aa25.49■■□□□ 1.67
CNEP1R1-202ENST00000427478 IFIT3O14879 490 aaKnown RBP25.48■■□□□ 1.67
CNEP1R1-202ENST00000427478 METAP2P50579 478 aaKnown RBP eCLIP25.48■■□□□ 1.67
CNEP1R1-202ENST00000427478 RNF41Q9H4P4 317 aaPredicted RBP25.48■■□□□ 1.67
CNEP1R1-202ENST00000427478 AATFQ9NY61 560 aaKnown RBP eCLIP25.48■■□□□ 1.67
CNEP1R1-202ENST00000427478 ECM29Q5VYK3 1845 aa25.48■■□□□ 1.67
CNEP1R1-202ENST00000427478 MICU3Q86XE3 530 aa25.48■■□□□ 1.67
CNEP1R1-202ENST00000427478 AKT1S1Q96B36 256 aa25.48■■□□□ 1.67
CNEP1R1-202ENST00000427478 ELP1O95163 1332 aa25.47■■□□□ 1.67
CNEP1R1-202ENST00000427478 LAMB1P07942 1786 aa25.47■■□□□ 1.67
CNEP1R1-202ENST00000427478 UFL1O94874 794 aa25.47■■□□□ 1.67
CNEP1R1-202ENST00000427478 ZNF804AQ7Z570 1209 aa25.47■■□□□ 1.67
CNEP1R1-202ENST00000427478 SGMS1Q86VZ5 419 aa25.47■■□□□ 1.67
CNEP1R1-202ENST00000427478 COL23A1Q86Y22 540 aaPredicted RBP25.47■■□□□ 1.67
CNEP1R1-202ENST00000427478 SPATA32Q96LK8 384 aa25.47■■□□□ 1.67
CNEP1R1-202ENST00000427478 BRIP1Q9BX63 1249 aa25.47■■□□□ 1.67
CNEP1R1-202ENST00000427478 SCAND2PQ9GZW5 306 aaPredicted RBP25.47■■□□□ 1.67
CNEP1R1-202ENST00000427478 ORC3Q9UBD5 711 aaPredicted RBP25.47■■□□□ 1.67
CNEP1R1-202ENST00000427478 SMIM22K7EJ46 135 aa25.46■■□□□ 1.67
CNEP1R1-202ENST00000427478 DZIP1Q86YF9 867 aaKnown RBP25.46■■□□□ 1.67
CNEP1R1-202ENST00000427478 ZKSCAN3Q9BRR0 538 aa25.46■■□□□ 1.67
CNEP1R1-202ENST00000427478 DUOX1Q9NRD9 1551 aa25.46■■□□□ 1.67
CNEP1R1-202ENST00000427478 ZBTB22O15209 634 aa25.46■■□□□ 1.67
CNEP1R1-202ENST00000427478 ZBTB43O43298 467 aa25.46■■□□□ 1.67
CNEP1R1-202ENST00000427478 LIFRP42702 1097 aa25.46■■□□□ 1.67
CNEP1R1-202ENST00000427478 CCDC144CPQ8IYA2 1237 aa25.46■■□□□ 1.67
CNEP1R1-202ENST00000427478 TDRD7Q8NHU6 1098 aaKnown RBP25.46■■□□□ 1.67
CNEP1R1-202ENST00000427478 MYL10Q9BUA6 226 aa25.46■■□□□ 1.67
CNEP1R1-202ENST00000427478 ANAPC4Q9UJX5 808 aa25.46■■□□□ 1.67
CNEP1R1-202ENST00000427478 TNS1Q9HBL0 1735 aaKnown RBP25.46■■□□□ 1.67
CNEP1R1-202ENST00000427478 CYP2D7A0A087X1C5 515 aa25.45■■□□□ 1.66
CNEP1R1-202ENST00000427478 CCDC183Q5T5S1 534 aa25.45■■□□□ 1.66
CNEP1R1-202ENST00000427478 SPTY2D1Q68D10 685 aaPredicted RBP25.45■■□□□ 1.66
CNEP1R1-202ENST00000427478 LEO1Q8WVC0 666 aaPredicted RBP25.45■■□□□ 1.66
CNEP1R1-202ENST00000427478 LRRC37AA6NMS7 1700 aa25.45■■□□□ 1.66
CNEP1R1-202ENST00000427478 NRXN2Q9P2S2 1712 aa25.45■■□□□ 1.66
CNEP1R1-202ENST00000427478 RXRBP28702 533 aa25.45■■□□□ 1.66
CNEP1R1-202ENST00000427478 HOXA10P31260 410 aaPredicted RBP25.45■■□□□ 1.66
CNEP1R1-202ENST00000427478 ADD1P35611 737 aaKnown RBP25.45■■□□□ 1.66
CNEP1R1-202ENST00000427478 GGA1Q9UJY5 639 aa25.45■■□□□ 1.66
CNEP1R1-202ENST00000427478 MYH2Q9UKX2 1941 aa25.45■■□□□ 1.66
CNEP1R1-202ENST00000427478 CCDC69A6NI79 296 aa25.44■■□□□ 1.66
CNEP1R1-202ENST00000427478 BBOX1O75936 387 aa25.44■■□□□ 1.66
CNEP1R1-202ENST00000427478 ATP2B4P23634 1241 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms