RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 MIGA1Q8NAN2 632 aa18.53■□□□□ 0.56
COL11A1-204ENST00000427239 RIOK1Q9BRS2 568 aaKnown RBP18.53■□□□□ 0.56
COL11A1-204ENST00000427239 A0A0D9SFI3 127 aa18.52■□□□□ 0.56
COL11A1-204ENST00000427239 WNT10BO00744 389 aa18.52■□□□□ 0.56
COL11A1-204ENST00000427239 KIF4BQ2VIQ3 1234 aa18.52■□□□□ 0.56
COL11A1-204ENST00000427239 TBC1D10BQ4KMP7 808 aaPredicted RBP18.52■□□□□ 0.56
COL11A1-204ENST00000427239 PNMA8AQ86V59 439 aaPredicted RBP18.52■□□□□ 0.56
COL11A1-204ENST00000427239 SEC62Q99442 399 aaKnown RBP18.52■□□□□ 0.56
COL11A1-204ENST00000427239 POTECB2RU33 542 aa18.52■□□□□ 0.55
COL11A1-204ENST00000427239 EPHX2P34913 555 aa18.52■□□□□ 0.55
COL11A1-204ENST00000427239 USP40Q9NVE5 1235 aa18.52■□□□□ 0.55
COL11A1-204ENST00000427239 RAD50Q92878 1312 aa18.51■□□□□ 0.55
COL11A1-204ENST00000427239 AK9Q5TCS8 1911 aa18.51■□□□□ 0.55
COL11A1-204ENST00000427239 MAST2Q6P0Q8 1798 aa18.51■□□□□ 0.55
COL11A1-204ENST00000427239 MBD4O95243 580 aa18.51■□□□□ 0.55
COL11A1-204ENST00000427239 GNAT2P19087 354 aa18.51■□□□□ 0.55
COL11A1-204ENST00000427239 PIAS4Q8N2W9 510 aaPredicted RBP18.51■□□□□ 0.55
COL11A1-204ENST00000427239 STRBPQ96SI9 672 aaKnown RBP18.51■□□□□ 0.55
COL11A1-204ENST00000427239 TAF1DQ9H5J8 278 aaPredicted RBP18.51■□□□□ 0.55
COL11A1-204ENST00000427239 GPAA1O43292 621 aa18.5■□□□□ 0.55
COL11A1-204ENST00000427239 EIF5BO60841 1220 aaKnown RBP18.5■□□□□ 0.55
COL11A1-204ENST00000427239 EGFRP00533 1210 aa18.5■□□□□ 0.55
COL11A1-204ENST00000427239 RHBDL3P58872 404 aa18.5■□□□□ 0.55
COL11A1-204ENST00000427239 NBPF9Q3BBW0 867 aa18.5■□□□□ 0.55
COL11A1-204ENST00000427239 CDC42EP5Q6NZY7 148 aa18.5■□□□□ 0.55
COL11A1-204ENST00000427239 CRNKL1Q9BZJ0 848 aaKnown RBP18.5■□□□□ 0.55
COL11A1-204ENST00000427239 TDRD3Q9H7E2 651 aaKnown RBP18.5■□□□□ 0.55
COL11A1-204ENST00000427239 RRAGCQ9HB90 399 aa18.5■□□□□ 0.55
COL11A1-204ENST00000427239 PCDHAC2Q9Y5I4 1007 aa18.5■□□□□ 0.55
COL11A1-204ENST00000427239 MYH2Q9UKX2 1941 aa18.5■□□□□ 0.55
COL11A1-204ENST00000427239 WDR90Q96KV7 1748 aa18.5■□□□□ 0.55
COL11A1-204ENST00000427239 MYH7P12883 1935 aa18.5■□□□□ 0.55
COL11A1-204ENST00000427239 M0R2C6 588 aa18.49■□□□□ 0.55
COL11A1-204ENST00000427239 SGSM2O43147 1006 aa18.49■□□□□ 0.55
COL11A1-204ENST00000427239 DYNLL1P63167 89 aaKnown RBP18.49■□□□□ 0.55
COL11A1-204ENST00000427239 ZC3H15Q8WU90 426 aaKnown RBP18.49■□□□□ 0.55
COL11A1-204ENST00000427239 ESYT1Q9BSJ8 1104 aa18.49■□□□□ 0.55
COL11A1-204ENST00000427239 ARMT1Q9H993 441 aa18.49■□□□□ 0.55
COL11A1-204ENST00000427239 TMOD2Q9NZR1 351 aa18.49■□□□□ 0.55
COL11A1-204ENST00000427239 HIRAP54198 1017 aaPredicted RBP18.49■□□□□ 0.55
COL11A1-204ENST00000427239 SPDYE2Q495Y8 402 aa18.49■□□□□ 0.55
COL11A1-204ENST00000427239 FKBP1CQ5VVH2 108 aa18.49■□□□□ 0.55
COL11A1-204ENST00000427239 LCORLQ8N3X6 602 aa18.49■□□□□ 0.55
COL11A1-204ENST00000427239 TRPM4Q8TD43 1214 aa18.49■□□□□ 0.55
COL11A1-204ENST00000427239 SH3RF3Q8TEJ3 882 aaPredicted RBP18.49■□□□□ 0.55
COL11A1-204ENST00000427239 SCN4AP35499 1836 aa18.48■□□□□ 0.55
COL11A1-204ENST00000427239 TEX11Q8IYF3 940 aa18.48■□□□□ 0.55
COL11A1-204ENST00000427239 IDI2Q9BXS1 227 aa18.48■□□□□ 0.55
COL11A1-204ENST00000427239 ZNF70Q9UC06 446 aaPredicted RBP18.48■□□□□ 0.55
COL11A1-204ENST00000427239 CCDC171Q6TFL3 1326 aa18.48■□□□□ 0.55
COL11A1-204ENST00000427239 PATL2C9JE40 543 aaKnown RBP18.47■□□□□ 0.55
COL11A1-204ENST00000427239 NPM3O75607 178 aaKnown RBP18.47■□□□□ 0.55
COL11A1-204ENST00000427239 ZNF589Q86UQ0 364 aaPredicted RBP18.47■□□□□ 0.55
COL11A1-204ENST00000427239 RPAP1Q9BWH6 1393 aaPredicted RBP18.47■□□□□ 0.55
COL11A1-204ENST00000427239 ATP8A2Q9NTI2 1148 aa18.47■□□□□ 0.55
COL11A1-204ENST00000427239 SLC4A4Q9Y6R1 1079 aa18.47■□□□□ 0.55
COL11A1-204ENST00000427239 GIMAP6Q6P9H5 292 aa18.46■□□□□ 0.55
COL11A1-204ENST00000427239 CCDC129Q6ZRS4 1044 aa18.46■□□□□ 0.55
COL11A1-204ENST00000427239 KIAA1211Q6ZU35 1233 aa18.46■□□□□ 0.55
COL11A1-204ENST00000427239 ZNF526Q8TF50 670 aaPredicted RBP18.46■□□□□ 0.55
COL11A1-204ENST00000427239 DDRGK1Q96HY6 314 aa18.46■□□□□ 0.55
COL11A1-204ENST00000427239 PGAP2Q9UHJ9 254 aa18.46■□□□□ 0.55
COL11A1-204ENST00000427239 WDHD1O75717 1129 aaPredicted RBP18.46■□□□□ 0.55
COL11A1-204ENST00000427239 USP5P45974 858 aa18.46■□□□□ 0.55
COL11A1-204ENST00000427239 TNFAIP1Q13829 316 aa18.46■□□□□ 0.55
COL11A1-204ENST00000427239 TGFBRAP1Q8WUH2 860 aa18.46■□□□□ 0.55
COL11A1-204ENST00000427239 NACAP1Q9BZK3 213 aa18.46■□□□□ 0.55
COL11A1-204ENST00000427239 GPBP1L1Q9HC44 474 aaPredicted RBP18.46■□□□□ 0.55
COL11A1-204ENST00000427239 PITPNM2Q9BZ72 1349 aa18.45■□□□□ 0.54
COL11A1-204ENST00000427239 CLRN2A0PK11 232 aa18.45■□□□□ 0.54
COL11A1-204ENST00000427239 APPP05067 770 aa18.45■□□□□ 0.54
COL11A1-204ENST00000427239 IL25Q9H293 177 aa18.45■□□□□ 0.54
COL11A1-204ENST00000427239 NMRK2Q9NPI5 230 aa18.45■□□□□ 0.54
COL11A1-204ENST00000427239 GSG1L2A8MUP6 293 aa18.44■□□□□ 0.54
COL11A1-204ENST00000427239 ENTPD3O75355 529 aa18.44■□□□□ 0.54
COL11A1-204ENST00000427239 REC8O95072 547 aa18.44■□□□□ 0.54
COL11A1-204ENST00000427239 HSPD1P10809 573 aaKnown RBP18.44■□□□□ 0.54
COL11A1-204ENST00000427239 YY1P25490 414 aa18.44■□□□□ 0.54
COL11A1-204ENST00000427239 TNNI2P48788 182 aa18.44■□□□□ 0.54
COL11A1-204ENST00000427239 EAPPQ56P03 285 aaPredicted RBP18.44■□□□□ 0.54
COL11A1-204ENST00000427239 FAM83AQ86UY5 434 aa18.44■□□□□ 0.54
COL11A1-204ENST00000427239 DCPSQ96C86 337 aaKnown RBP18.44■□□□□ 0.54
COL11A1-204ENST00000427239 DSCC1Q9BVC3 393 aa18.44■□□□□ 0.54
COL11A1-204ENST00000427239 VEZTQ9HBM0 779 aa18.44■□□□□ 0.54
COL11A1-204ENST00000427239 PRKAB2O43741 272 aa18.43■□□□□ 0.54
COL11A1-204ENST00000427239 C8orf34Q49A92 452 aa18.43■□□□□ 0.54
COL11A1-204ENST00000427239 ANGEL2Q5VTE6 544 aaKnown RBP18.43■□□□□ 0.54
COL11A1-204ENST00000427239 APOBEC3FQ8IUX4 373 aaKnown RBP18.43■□□□□ 0.54
COL11A1-204ENST00000427239 SDR42E1Q8WUS8 393 aa18.43■□□□□ 0.54
COL11A1-204ENST00000427239 DCP1AQ9NPI6 582 aaPredicted RBP18.43■□□□□ 0.54
COL11A1-204ENST00000427239 MKRN1Q9UHC7 482 aaKnown RBP18.43■□□□□ 0.54
COL11A1-204ENST00000427239 CACNB3P54284 484 aa18.43■□□□□ 0.54
COL11A1-204ENST00000427239 NFIAQ12857 509 aa18.43■□□□□ 0.54
COL11A1-204ENST00000427239 ALX1Q15699 326 aa18.43■□□□□ 0.54
COL11A1-204ENST00000427239 GGA3Q9NZ52 723 aa18.43■□□□□ 0.54
COL11A1-204ENST00000427239 FAM198AQ9UFP1 575 aa18.43■□□□□ 0.54
COL11A1-204ENST00000427239 TCP10L2B9ZVM9 353 aa18.42■□□□□ 0.54
COL11A1-204ENST00000427239 EPB41L2O43491 1005 aaKnown RBP18.42■□□□□ 0.54
COL11A1-204ENST00000427239 VPS53Q5VIR6 699 aa18.42■□□□□ 0.54
COL11A1-204ENST00000427239 IFNL3Q8IZI9 196 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms