RNA–Protein interactions for RNA: ENST00000427231.6

NEB-209, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-209ENST00000427231 SYCE1Q8N0S2 351 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 DTX3LQ8TDB6 740 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 SPZ1Q9BXG8 430 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 STIM2Q9P246 746 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 FAF1Q9UNN5 650 aaPredicted RBP2.84□□□□□ -1.95
NEB-209ENST00000427231 ELL2O00472 640 aaPredicted RBP2.84□□□□□ -1.95
NEB-209ENST00000427231 PPP4R3AQ6IN85 833 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 OSBPL3Q9H4L5 887 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 RIPOR2Q9Y4F9 1068 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 EBAG9O00559 213 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 GFPT2O94808 682 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 TSG101Q99816 390 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 WDR75Q8IWA0 830 aaKnown RBP2.84□□□□□ -1.95
NEB-209ENST00000427231 FAXDC2Q96IV6 333 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 PUF60Q9UHX1 559 aaKnown RBP2.84□□□□□ -1.95
NEB-209ENST00000427231 LIMCH1Q9UPQ0 1083 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 RASIP1Q5U651 963 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 VPS53Q5VIR6 699 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 BBOF1Q8ND07 529 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 TTC1Q99614 292 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 NYXQ9GZU5 481 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 MYBL1P10243 752 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 SPA17Q15506 151 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 TRIM74Q86UV6 250 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 TRIM73Q86UV7 250 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 TRIM11Q96F44 468 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 CCDC43Q96MW1 224 aaKnown RBP2.84□□□□□ -1.95
NEB-209ENST00000427231 UHRF1BP1LA0JNW5 1464 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 NOP9Q86U38 636 aaKnown RBP2.84□□□□□ -1.95
NEB-209ENST00000427231 MSL3Q8N5Y2 521 aaKnown RBP2.84□□□□□ -1.95
NEB-209ENST00000427231 AK8Q96MA6 479 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 SPATS2LQ9NUQ6 558 aaKnown RBP2.84□□□□□ -1.95
NEB-209ENST00000427231 ATP2A2P16615 1042 aaKnown RBP2.84□□□□□ -1.95
NEB-209ENST00000427231 GABPB1Q06547 395 aaPredicted RBP2.84□□□□□ -1.95
NEB-209ENST00000427231 AFAP1L2Q8N4X5 818 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 WHAMMQ8TF30 809 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 ATP2A3Q93084 1043 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 TMEM87BQ96K49 555 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 RRP7AQ9Y3A4 280 aaKnown RBP2.84□□□□□ -1.95
NEB-209ENST00000427231 KDRP35968 1356 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 NPHP3Q7Z494 1330 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 LSM1O15116 133 aaKnown RBP2.84□□□□□ -1.95
NEB-209ENST00000427231 SEC31AO94979 1220 aaKnown RBP2.84□□□□□ -1.95
NEB-209ENST00000427231 CCDC170Q8IYT3 715 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 MS4A14Q96JA4 679 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 CDHR1Q96JP9 859 aa2.84□□□□□ -1.95
NEB-209ENST00000427231 SASH1O94885 1247 aa2.84□□□□□ -1.96
NEB-209ENST00000427231 CCDC144CPQ8IYA2 1237 aa2.84□□□□□ -1.96
NEB-209ENST00000427231 CKAP2LQ8IYA6 745 aa2.84□□□□□ -1.96
NEB-209ENST00000427231 EXOC5O00471 708 aa2.84□□□□□ -1.96
NEB-209ENST00000427231 NLRP5P59047 1200 aa2.84□□□□□ -1.96
NEB-209ENST00000427231 AKNAD1Q5T1N1 836 aa2.84□□□□□ -1.96
NEB-209ENST00000427231 MAPK6Q16659 721 aa2.84□□□□□ -1.96
NEB-209ENST00000427231 KIAA0753Q2KHM9 967 aa2.84□□□□□ -1.96
NEB-209ENST00000427231 SAPCD2Q86UD0 394 aa2.84□□□□□ -1.96
NEB-209ENST00000427231 STRN4Q9NRL3 753 aa2.84□□□□□ -1.96
NEB-209ENST00000427231 TDRD9Q8NDG6 1382 aaKnown RBP2.84□□□□□ -1.96
NEB-209ENST00000427231 PTPN21Q16825 1174 aa2.84□□□□□ -1.96
NEB-209ENST00000427231 KRI1Q8N9T8 703 aaKnown RBP2.84□□□□□ -1.96
NEB-209ENST00000427231 MLKLQ8NB16 471 aa2.84□□□□□ -1.96
NEB-209ENST00000427231 TRIM63Q969Q1 353 aa2.84□□□□□ -1.96
NEB-209ENST00000427231 KRT86O43790 486 aa2.84□□□□□ -1.96
NEB-209ENST00000427231 RXRBP28702 533 aa2.84□□□□□ -1.96
NEB-209ENST00000427231 FAM47EQ6ZV65 393 aa2.84□□□□□ -1.96
NEB-209ENST00000427231 POTEDQ86YR6 584 aa2.84□□□□□ -1.96
NEB-209ENST00000427231 HAUS1Q96CS2 278 aa2.84□□□□□ -1.96
NEB-209ENST00000427231 MAML3Q96JK9 1138 aa2.84□□□□□ -1.96
NEB-209ENST00000427231 EIF4G1Q04637 1599 aaKnown RBP2.84□□□□□ -1.96
NEB-209ENST00000427231 SKILP12757 684 aa2.84□□□□□ -1.96
NEB-209ENST00000427231 SKOR1P84550 965 aa2.84□□□□□ -1.96
NEB-209ENST00000427231 ODR4Q5SWX8 454 aa2.84□□□□□ -1.96
NEB-209ENST00000427231 NBPF10Q6P3W6 841 aaKnown RBP2.84□□□□□ -1.96
NEB-209ENST00000427231 IFT74Q96LB3 600 aa2.84□□□□□ -1.96
NEB-209ENST00000427231 NOP14P78316 857 aaKnown RBP2.84□□□□□ -1.96
NEB-209ENST00000427231 GUCY1B3Q02153 619 aa2.84□□□□□ -1.96
NEB-209ENST00000427231 GLE1Q53GS7 698 aaKnown RBP2.84□□□□□ -1.96
NEB-209ENST00000427231 SPECC1Q5M775 1068 aa2.84□□□□□ -1.96
NEB-209ENST00000427231 PPP4R3CPQ6ZMV5 832 aa2.84□□□□□ -1.96
NEB-209ENST00000427231 MID2Q9UJV3 735 aa2.84□□□□□ -1.96
NEB-209ENST00000427231 BRD1O95696 1058 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 IGHDP01880 384 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 SMARCA1P28370 1054 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 UBE4AQ14139 1066 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 SNIP1Q8TAD8 396 aaKnown RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 LRRC59Q96AG4 307 aaKnown RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 CEP63Q96MT8 703 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 SBNO2Q9Y2G9 1366 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 H7C1D1 291 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 CLCN2P51788 898 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 LSM14AQ8ND56 463 aaKnown RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 CRACR2AQ9BSW2 395 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 MED4Q9NPJ6 270 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 NEK4P51957 841 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 PHC3Q8NDX5 983 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 TBX22Q9Y458 520 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 PPME1Q9Y570 386 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 MAP3K9P80192 1104 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 TMED1Q13445 227 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 C1orf228Q6PIY5 440 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 CATIPQ7Z7H3 387 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms