RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 USP25Q9UHP3 1055 aa15.8■□□□□ 0.12
RPL28-202ENST00000426763 AFF2P51816 1311 aa15.8■□□□□ 0.12
RPL28-202ENST00000426763 ZNF853P0CG23 659 aa15.79■□□□□ 0.12
RPL28-202ENST00000426763 GSDMDP57764 484 aa15.79■□□□□ 0.12
RPL28-202ENST00000426763 GPR162Q16538 588 aa15.79■□□□□ 0.12
RPL28-202ENST00000426763 TMEM87AQ8NBN3 555 aa15.79■□□□□ 0.12
RPL28-202ENST00000426763 DHX58Q96C10 678 aa15.79■□□□□ 0.12
RPL28-202ENST00000426763 XDHP47989 1333 aa15.79■□□□□ 0.12
RPL28-202ENST00000426763 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.79■□□□□ 0.12
RPL28-202ENST00000426763 BCAMP50895 628 aa15.79■□□□□ 0.12
RPL28-202ENST00000426763 ATL3Q6DD88 541 aa15.79■□□□□ 0.12
RPL28-202ENST00000426763 ZNF804BA4D1E1 1349 aa15.79■□□□□ 0.12
RPL28-202ENST00000426763 PPEF1O14829 653 aaPredicted RBP15.79■□□□□ 0.12
RPL28-202ENST00000426763 PRAMEF22A3QJZ6 481 aa15.79■□□□□ 0.12
RPL28-202ENST00000426763 PSMA7O14818 248 aa15.79■□□□□ 0.12
RPL28-202ENST00000426763 PDE8BO95263 885 aa15.79■□□□□ 0.12
RPL28-202ENST00000426763 TRMT2AQ8IZ69 625 aaKnown RBP15.79■□□□□ 0.12
RPL28-202ENST00000426763 GTPBP4Q9BZE4 634 aaKnown RBP15.79■□□□□ 0.12
RPL28-202ENST00000426763 NEMFO60524 1076 aa15.79■□□□□ 0.12
RPL28-202ENST00000426763 ERLIN1O75477 346 aa15.79■□□□□ 0.12
RPL28-202ENST00000426763 SLC1A4P43007 532 aa15.79■□□□□ 0.12
RPL28-202ENST00000426763 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.79■□□□□ 0.12
RPL28-202ENST00000426763 LEMD3Q9Y2U8 911 aa15.79■□□□□ 0.12
RPL28-202ENST00000426763 E9PCH4 1651 aa15.78■□□□□ 0.12
RPL28-202ENST00000426763 KIF5CO60282 957 aa15.78■□□□□ 0.12
RPL28-202ENST00000426763 GIMAP6Q6P9H5 292 aa15.78■□□□□ 0.12
RPL28-202ENST00000426763 LZTS2Q9BRK4 669 aa15.78■□□□□ 0.12
RPL28-202ENST00000426763 USP8P40818 1118 aa15.78■□□□□ 0.12
RPL28-202ENST00000426763 SPAG1Q07617 926 aa15.78■□□□□ 0.12
RPL28-202ENST00000426763 UVSSAQ2YD98 709 aa15.78■□□□□ 0.12
RPL28-202ENST00000426763 HAUS7Q99871 368 aa15.78■□□□□ 0.12
RPL28-202ENST00000426763 TMC6Q7Z403 805 aa15.78■□□□□ 0.12
RPL28-202ENST00000426763 DACT1Q9NYF0 836 aa15.78■□□□□ 0.12
RPL28-202ENST00000426763 N4BP3O15049 544 aa15.77■□□□□ 0.12
RPL28-202ENST00000426763 KRT13P13646 458 aa15.77■□□□□ 0.12
RPL28-202ENST00000426763 DPY19L2Q6NUT2 758 aa15.77■□□□□ 0.12
RPL28-202ENST00000426763 GOPCQ9HD26 462 aa15.77■□□□□ 0.12
RPL28-202ENST00000426763 GPR108Q9NPR9 543 aa15.77■□□□□ 0.12
RPL28-202ENST00000426763 GOLGA6L10A6NI86 522 aa15.77■□□□□ 0.12
RPL28-202ENST00000426763 PPARAQ07869 468 aa15.77■□□□□ 0.12
RPL28-202ENST00000426763 ZYXQ15942 572 aaKnown RBP15.77■□□□□ 0.12
RPL28-202ENST00000426763 SEC24BO95487 1268 aa15.77■□□□□ 0.11
RPL28-202ENST00000426763 DOK7Q18PE1 504 aa15.77■□□□□ 0.11
RPL28-202ENST00000426763 SKIDA1Q1XH10 827 aa15.77■□□□□ 0.11
RPL28-202ENST00000426763 RILPL1Q5EBL4 403 aa15.77■□□□□ 0.11
RPL28-202ENST00000426763 AKNAD1Q5T1N1 836 aa15.77■□□□□ 0.11
RPL28-202ENST00000426763 V9GY48 417 aaPredicted RBP15.77■□□□□ 0.11
RPL28-202ENST00000426763 CYP27B1O15528 508 aa15.77■□□□□ 0.11
RPL28-202ENST00000426763 AGLP35573 1532 aa15.77■□□□□ 0.11
RPL28-202ENST00000426763 FAM13AO94988 1023 aa15.76■□□□□ 0.11
RPL28-202ENST00000426763 TFAP4Q01664 338 aa15.76■□□□□ 0.11
RPL28-202ENST00000426763 ARHGAP27Q6ZUM4 889 aa15.76■□□□□ 0.11
RPL28-202ENST00000426763 ZNF771Q7L3S4 317 aaPredicted RBP15.76■□□□□ 0.11
RPL28-202ENST00000426763 CTAGE1Q96RT6 745 aa15.76■□□□□ 0.11
RPL28-202ENST00000426763 BBOX1O75936 387 aa15.76■□□□□ 0.11
RPL28-202ENST00000426763 PDE6AP16499 860 aa15.76■□□□□ 0.11
RPL28-202ENST00000426763 LETM2Q2VYF4 491 aa15.76■□□□□ 0.11
RPL28-202ENST00000426763 ZSCAN23Q3MJ62 389 aa15.76■□□□□ 0.11
RPL28-202ENST00000426763 ERFEQ4G0M1 354 aa15.76■□□□□ 0.11
RPL28-202ENST00000426763 NLRP10Q86W26 655 aa15.76■□□□□ 0.11
RPL28-202ENST00000426763 SETBP1Q9Y6X0 1596 aa15.76■□□□□ 0.11
RPL28-202ENST00000426763 LAMC1P11047 1609 aa15.76■□□□□ 0.11
RPL28-202ENST00000426763 SEMA3EO15041 775 aa15.76■□□□□ 0.11
RPL28-202ENST00000426763 KCNQ4P56696 695 aa15.76■□□□□ 0.11
RPL28-202ENST00000426763 EDC3Q96F86 508 aaKnown RBP15.76■□□□□ 0.11
RPL28-202ENST00000426763 INO80Q9ULG1 1556 aaPredicted RBP15.76■□□□□ 0.11
RPL28-202ENST00000426763 MADDQ8WXG6 1647 aa15.76■□□□□ 0.11
RPL28-202ENST00000426763 ZBED4O75132 1171 aa15.76■□□□□ 0.11
RPL28-202ENST00000426763 BACH1O14867 736 aa15.76■□□□□ 0.11
RPL28-202ENST00000426763 CCDC172P0C7W6 258 aa15.76■□□□□ 0.11
RPL28-202ENST00000426763 SETQ01105 290 aaPredicted RBP15.76■□□□□ 0.11
RPL28-202ENST00000426763 PTPN14Q15678 1187 aa15.76■□□□□ 0.11
RPL28-202ENST00000426763 FERMT2Q96AC1 680 aa15.76■□□□□ 0.11
RPL28-202ENST00000426763 AXIN2Q9Y2T1 843 aa15.76■□□□□ 0.11
RPL28-202ENST00000426763 SYT1P21579 422 aa15.75■□□□□ 0.11
RPL28-202ENST00000426763 NCBP1Q09161 790 aaKnown RBP15.75■□□□□ 0.11
RPL28-202ENST00000426763 MTERF4Q7Z6M4 381 aaKnown RBP15.75■□□□□ 0.11
RPL28-202ENST00000426763 ZSCAN30Q86W11 494 aa15.75■□□□□ 0.11
RPL28-202ENST00000426763 PTCH1Q13635 1447 aa15.75■□□□□ 0.11
RPL28-202ENST00000426763 ESPNB1AK53 854 aa15.75■□□□□ 0.11
RPL28-202ENST00000426763 PRKG1Q13976 671 aa15.75■□□□□ 0.11
RPL28-202ENST00000426763 FCHSD1Q86WN1 690 aa15.75■□□□□ 0.11
RPL28-202ENST00000426763 IQUBQ8NA54 791 aa15.75■□□□□ 0.11
RPL28-202ENST00000426763 ABCA6Q8N139 1617 aa15.75■□□□□ 0.11
RPL28-202ENST00000426763 LRSAM1Q6UWE0 723 aa15.75■□□□□ 0.11
RPL28-202ENST00000426763 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.75■□□□□ 0.11
RPL28-202ENST00000426763 E7EWF7 191 aa15.74■□□□□ 0.11
RPL28-202ENST00000426763 KIAA0825Q8IV33 1275 aa15.74■□□□□ 0.11
RPL28-202ENST00000426763 PPRC1Q5VV67 1664 aaKnown RBP15.74■□□□□ 0.11
RPL28-202ENST00000426763 USP17L12C9JPN9 530 aa15.74■□□□□ 0.11
RPL28-202ENST00000426763 USP17L21D6R901 530 aa15.74■□□□□ 0.11
RPL28-202ENST00000426763 HSPA4P34932 840 aa15.74■□□□□ 0.11
RPL28-202ENST00000426763 TCHPQ9BT92 498 aa15.74■□□□□ 0.11
RPL28-202ENST00000426763 ATG3Q9NT62 314 aa15.74■□□□□ 0.11
RPL28-202ENST00000426763 IVNS1ABPQ9Y6Y0 642 aa15.74■□□□□ 0.11
RPL28-202ENST00000426763 USP31Q70CQ4 1352 aa15.74■□□□□ 0.11
RPL28-202ENST00000426763 ATP10DQ9P241 1426 aa15.74■□□□□ 0.11
RPL28-202ENST00000426763 PUS3Q9BZE2 481 aaKnown RBP15.74■□□□□ 0.11
RPL28-202ENST00000426763 ZNF174Q15697 407 aa15.74■□□□□ 0.11
RPL28-202ENST00000426763 EAPPQ56P03 285 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms