RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 ACTN4O43707 911 aaKnown RBP7.05□□□□□ -1.28
HERPUD2-204ENST00000426180 NEFLP07196 543 aa7.05□□□□□ -1.28
HERPUD2-204ENST00000426180 LMNB1P20700 586 aa7.05□□□□□ -1.28
HERPUD2-204ENST00000426180 UBE4AQ14139 1066 aa7.05□□□□□ -1.28
HERPUD2-204ENST00000426180 PUM3Q15397 648 aaKnown RBP7.05□□□□□ -1.28
HERPUD2-204ENST00000426180 GRIPAP1Q4V328 841 aa7.05□□□□□ -1.28
HERPUD2-204ENST00000426180 PKDCCQ504Y2 493 aa7.05□□□□□ -1.28
HERPUD2-204ENST00000426180 TNNI3KQ59H18 835 aa7.05□□□□□ -1.28
HERPUD2-204ENST00000426180 TRIM67Q6ZTA4 783 aa7.05□□□□□ -1.28
HERPUD2-204ENST00000426180 ZNF598Q86UK7 904 aaKnown RBP7.05□□□□□ -1.28
HERPUD2-204ENST00000426180 C16orf71Q8IYS4 520 aaPredicted RBP7.05□□□□□ -1.28
HERPUD2-204ENST00000426180 LARGE2Q8N3Y3 721 aa7.05□□□□□ -1.28
HERPUD2-204ENST00000426180 ANKLE1Q8NAG6 615 aa7.05□□□□□ -1.28
HERPUD2-204ENST00000426180 SUPT20HQ8NEM7 779 aa7.05□□□□□ -1.28
HERPUD2-204ENST00000426180 EMID1Q96A84 441 aaPredicted RBP7.05□□□□□ -1.28
HERPUD2-204ENST00000426180 EAF2Q96CJ1 260 aaPredicted RBP7.05□□□□□ -1.28
HERPUD2-204ENST00000426180 FAM84BQ96KN1 310 aaPredicted RBP7.05□□□□□ -1.28
HERPUD2-204ENST00000426180 EYA3Q99504 573 aa7.05□□□□□ -1.28
HERPUD2-204ENST00000426180 DBNDD2Q9BQY9 259 aa7.05□□□□□ -1.28
HERPUD2-204ENST00000426180 CCDC8Q9H0W5 538 aaPredicted RBP7.05□□□□□ -1.28
HERPUD2-204ENST00000426180 RWDD1Q9H446 243 aaPredicted RBP7.05□□□□□ -1.28
HERPUD2-204ENST00000426180 RTN4Q9NQC3 1192 aaKnown RBP7.05□□□□□ -1.28
HERPUD2-204ENST00000426180 FPGT-TNNI3KV9GXZ4 949 aa7.05□□□□□ -1.28
HERPUD2-204ENST00000426180 MED23Q9ULK4 1368 aa7.05□□□□□ -1.28
HERPUD2-204ENST00000426180 FER1L6Q2WGJ9 1857 aa7.04□□□□□ -1.28
HERPUD2-204ENST00000426180 ZNF541Q9H0D2 1346 aa7.04□□□□□ -1.28
HERPUD2-204ENST00000426180 A0A1B0GUL7 405 aa7.04□□□□□ -1.28
HERPUD2-204ENST00000426180 TLL1O43897 1013 aa7.04□□□□□ -1.28
HERPUD2-204ENST00000426180 ECE2O60344 883 aa7.04□□□□□ -1.28
HERPUD2-204ENST00000426180 RAB11FIP3O75154 756 aa7.04□□□□□ -1.28
HERPUD2-204ENST00000426180 PHKA1P46020 1223 aa7.04□□□□□ -1.28
HERPUD2-204ENST00000426180 HSP90AB4PQ58FF6 505 aa7.04□□□□□ -1.28
HERPUD2-204ENST00000426180 B4GALNT3Q6L9W6 998 aa7.04□□□□□ -1.28
HERPUD2-204ENST00000426180 C15orf52Q6ZUT6 534 aaKnown RBP7.04□□□□□ -1.28
HERPUD2-204ENST00000426180 FBXO33Q7Z6M2 555 aa7.04□□□□□ -1.28
HERPUD2-204ENST00000426180 AACSQ86V21 672 aa7.04□□□□□ -1.28
HERPUD2-204ENST00000426180 OTUD7AQ8TE49 926 aaPredicted RBP7.04□□□□□ -1.28
HERPUD2-204ENST00000426180 LPIN2Q92539 896 aa7.04□□□□□ -1.28
HERPUD2-204ENST00000426180 ZNF775Q96BV0 537 aaPredicted RBP7.04□□□□□ -1.28
HERPUD2-204ENST00000426180 KIF1BPQ96EK5 621 aa7.04□□□□□ -1.28
HERPUD2-204ENST00000426180 XAGE2Q96GT9 111 aa7.04□□□□□ -1.28
HERPUD2-204ENST00000426180 NEUROD6Q96NK8 337 aa7.04□□□□□ -1.28
HERPUD2-204ENST00000426180 ZC3H12CQ9C0D7 883 aaKnown RBP7.04□□□□□ -1.28
HERPUD2-204ENST00000426180 IQSEC3Q9UPP2 1182 aaPredicted RBP7.04□□□□□ -1.28
HERPUD2-204ENST00000426180 GOLGB1Q14789 3259 aaKnown RBP7.04□□□□□ -1.28
HERPUD2-204ENST00000426180 FZD9O00144 591 aa7.03□□□□□ -1.28
HERPUD2-204ENST00000426180 DGAT1O75907 488 aa7.03□□□□□ -1.28
HERPUD2-204ENST00000426180 RAD17O75943 681 aa7.03□□□□□ -1.28
HERPUD2-204ENST00000426180 S1PR4O95977 384 aa7.03□□□□□ -1.28
HERPUD2-204ENST00000426180 CFHP08603 1231 aa7.03□□□□□ -1.28
HERPUD2-204ENST00000426180 IFIT1P09914 478 aaKnown RBP7.03□□□□□ -1.28
HERPUD2-204ENST00000426180 SLC5A1P13866 664 aa7.03□□□□□ -1.28
HERPUD2-204ENST00000426180 HIBADHP31937 336 aaKnown RBP7.03□□□□□ -1.28
HERPUD2-204ENST00000426180 ANKRD45Q5TZF3 282 aa7.03□□□□□ -1.28
HERPUD2-204ENST00000426180 SKAP1Q86WV1 359 aa7.03□□□□□ -1.28
HERPUD2-204ENST00000426180 ERC1Q8IUD2 1116 aa7.03□□□□□ -1.28
HERPUD2-204ENST00000426180 SMC5Q8IY18 1101 aa7.03□□□□□ -1.28
HERPUD2-204ENST00000426180 NIM1KQ8IY84 436 aa7.03□□□□□ -1.28
HERPUD2-204ENST00000426180 KCNV2Q8TDN2 545 aa7.03□□□□□ -1.28
HERPUD2-204ENST00000426180 MXD3Q9BW11 206 aa7.03□□□□□ -1.28
HERPUD2-204ENST00000426180 LRRCC1Q9C099 1032 aa7.03□□□□□ -1.28
HERPUD2-204ENST00000426180 VPS33BQ9H267 617 aa7.03□□□□□ -1.28
HERPUD2-204ENST00000426180 CD209Q9NNX6 404 aa7.03□□□□□ -1.28
HERPUD2-204ENST00000426180 GPR108Q9NPR9 543 aa7.03□□□□□ -1.28
HERPUD2-204ENST00000426180 DBNLQ9UJU6 430 aaKnown RBP7.03□□□□□ -1.28
HERPUD2-204ENST00000426180 JAG2Q9Y219 1238 aa7.03□□□□□ -1.28
HERPUD2-204ENST00000426180 AKAP2Q9Y2D5 859 aa7.03□□□□□ -1.28
HERPUD2-204ENST00000426180 COL1A1P02452 1464 aaPredicted RBP7.03□□□□□ -1.28
HERPUD2-204ENST00000426180 KDM2BQ8NHM5 1336 aa7.02□□□□□ -1.28
HERPUD2-204ENST00000426180 NR1I2O75469 434 aa7.02□□□□□ -1.29
HERPUD2-204ENST00000426180 IL1R1P14778 569 aa7.02□□□□□ -1.29
HERPUD2-204ENST00000426180 PRR20EP86478 221 aa7.02□□□□□ -1.29
HERPUD2-204ENST00000426180 PRR20CP86479 221 aa7.02□□□□□ -1.29
HERPUD2-204ENST00000426180 PRR20DP86480 221 aa7.02□□□□□ -1.29
HERPUD2-204ENST00000426180 PRR20BP86481 221 aa7.02□□□□□ -1.29
HERPUD2-204ENST00000426180 PRR20AP86496 221 aa7.02□□□□□ -1.29
HERPUD2-204ENST00000426180 CXCL9Q07325 125 aa7.02□□□□□ -1.29
HERPUD2-204ENST00000426180 SCARF1Q14162 830 aa7.02□□□□□ -1.29
HERPUD2-204ENST00000426180 TSHZ3Q63HK5 1081 aa7.02□□□□□ -1.29
HERPUD2-204ENST00000426180 CCDC102BQ68D86 513 aa7.02□□□□□ -1.29
HERPUD2-204ENST00000426180 PI16Q6UXB8 463 aa7.02□□□□□ -1.29
HERPUD2-204ENST00000426180 LIAT1Q6ZQX7 453 aa7.02□□□□□ -1.29
HERPUD2-204ENST00000426180 ZNF804AQ7Z570 1209 aa7.02□□□□□ -1.29
HERPUD2-204ENST00000426180 TDRD7Q8NHU6 1098 aaKnown RBP7.02□□□□□ -1.29
HERPUD2-204ENST00000426180 JDP2Q8WYK2 163 aa7.02□□□□□ -1.29
HERPUD2-204ENST00000426180 GCC1Q96CN9 775 aa7.02□□□□□ -1.29
HERPUD2-204ENST00000426180 COA1Q9GZY4 146 aa7.02□□□□□ -1.29
HERPUD2-204ENST00000426180 TSHZ2Q9NRE2 1034 aa7.02□□□□□ -1.29
HERPUD2-204ENST00000426180 ZNRF3Q9ULT6 936 aa7.02□□□□□ -1.29
HERPUD2-204ENST00000426180 NDUFB9Q9Y6M9 179 aa7.02□□□□□ -1.29
HERPUD2-204ENST00000426180 SHTN1A0MZ66 631 aa7.01□□□□□ -1.29
HERPUD2-204ENST00000426180 PSMD14O00487 310 aa7.01□□□□□ -1.29
HERPUD2-204ENST00000426180 DDNO94850 711 aaPredicted RBP7.01□□□□□ -1.29
HERPUD2-204ENST00000426180 IFIT2P09913 472 aaKnown RBP7.01□□□□□ -1.29
HERPUD2-204ENST00000426180 GTF2IP78347 998 aa7.01□□□□□ -1.29
HERPUD2-204ENST00000426180 NUCB1Q02818 461 aa7.01□□□□□ -1.29
HERPUD2-204ENST00000426180 CHAF1AQ13111 956 aaPredicted RBP7.01□□□□□ -1.29
HERPUD2-204ENST00000426180 RASGRF1Q13972 1273 aa7.01□□□□□ -1.29
HERPUD2-204ENST00000426180 GRIK5Q16478 980 aa7.01□□□□□ -1.29
HERPUD2-204ENST00000426180 CAVIN4Q5BKX8 364 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms