RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 USP54Q70EL1 1684 aa8.68□□□□□ -1.02
SMARCC1-202ENST00000425518 FOXN1O15353 648 aa8.67□□□□□ -1.02
SMARCC1-202ENST00000425518 CBFA2T2O43439 604 aa8.67□□□□□ -1.02
SMARCC1-202ENST00000425518 MCAMP43121 646 aa8.67□□□□□ -1.02
SMARCC1-202ENST00000425518 TCIRG1Q13488 830 aa8.67□□□□□ -1.02
SMARCC1-202ENST00000425518 TERF2Q15554 542 aa8.67□□□□□ -1.02
SMARCC1-202ENST00000425518 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.67□□□□□ -1.02
SMARCC1-202ENST00000425518 ATG3Q9NT62 314 aa8.67□□□□□ -1.02
SMARCC1-202ENST00000425518 ZNF446Q9NWS9 450 aa8.67□□□□□ -1.02
SMARCC1-202ENST00000425518 PCDHA5Q9Y5H7 936 aa8.67□□□□□ -1.02
SMARCC1-202ENST00000425518 GOLGA8AA7E2F4 631 aa8.67□□□□□ -1.02
SMARCC1-202ENST00000425518 IKBKBO14920 756 aa8.67□□□□□ -1.02
SMARCC1-202ENST00000425518 ZBTB43O43298 467 aa8.67□□□□□ -1.02
SMARCC1-202ENST00000425518 CDKL5O76039 1030 aa8.67□□□□□ -1.02
SMARCC1-202ENST00000425518 RRP12Q5JTH9 1297 aaKnown RBP8.67□□□□□ -1.02
SMARCC1-202ENST00000425518 L2HGDHQ9H9P8 463 aa8.67□□□□□ -1.02
SMARCC1-202ENST00000425518 KCNH3Q9ULD8 1083 aa8.67□□□□□ -1.02
SMARCC1-202ENST00000425518 SLIT3O75094 1523 aa8.67□□□□□ -1.02
SMARCC1-202ENST00000425518 BMS1Q14692 1282 aaKnown RBP8.67□□□□□ -1.02
SMARCC1-202ENST00000425518 TMEM67Q5HYA8 995 aa8.67□□□□□ -1.02
SMARCC1-202ENST00000425518 APOA5Q6Q788 366 aa8.67□□□□□ -1.02
SMARCC1-202ENST00000425518 FOXP4Q8IVH2 680 aaPredicted RBP8.67□□□□□ -1.02
SMARCC1-202ENST00000425518 HELBQ8NG08 1087 aaPredicted RBP8.67□□□□□ -1.02
SMARCC1-202ENST00000425518 CARD6Q9BX69 1037 aa8.67□□□□□ -1.02
SMARCC1-202ENST00000425518 HSD3B7Q9H2F3 369 aa8.67□□□□□ -1.02
SMARCC1-202ENST00000425518 KCND1Q9NSA2 647 aa8.67□□□□□ -1.02
SMARCC1-202ENST00000425518 ZMYM6O95789 1325 aa8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 CLCN6P51797 869 aa8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 NBPF3Q9H094 633 aa8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 EPC1Q9H2F5 836 aa8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 ZNF532Q9HCE3 1301 aa8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 IFIT3O14879 490 aaKnown RBP8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 ZNF827Q17R98 1081 aa8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 TICAM2Q86XR7 235 aa8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 PIH1D3Q9NQM4 214 aaKnown RBP8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 PRDM11Q9NQV5 511 aa8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 TUBE1Q9UJT0 475 aa8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 C1orf167Q5SNV9 1468 aa8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 BTBD18B2RXH4 712 aa8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 SH2B2O14492 632 aaPredicted RBP8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 ITGA6P23229 1130 aa8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 ADD2P35612 726 aa8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 CTDSPL2Q05D32 466 aa8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 PDE4BQ07343 736 aa8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 PTPAQ15257 358 aa8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 KRBA2Q6ZNG9 492 aa8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 METTL16Q86W50 562 aaKnown RBP8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 CMTR1Q8N1G2 835 aaKnown RBP8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 AIDAQ96BJ3 306 aa8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 TIGD1Q96MW7 591 aa8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 ZKSCAN3Q9BRR0 538 aa8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 ISCA1Q9BUE6 129 aa8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 GREM2Q9H772 168 aa8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 STRN4Q9NRL3 753 aa8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 KCNJ14Q9UNX9 436 aa8.66□□□□□ -1.02
SMARCC1-202ENST00000425518 C5P01031 1676 aa8.65□□□□□ -1.02
SMARCC1-202ENST00000425518 CCP110O43303 1012 aa8.65□□□□□ -1.02
SMARCC1-202ENST00000425518 PPP6R2O75170 966 aa8.65□□□□□ -1.02
SMARCC1-202ENST00000425518 ADKP55263 362 aaKnown RBP8.65□□□□□ -1.02
SMARCC1-202ENST00000425518 GNG11P61952 73 aa8.65□□□□□ -1.02
SMARCC1-202ENST00000425518 DHX8Q14562 1220 aaKnown RBP8.65□□□□□ -1.02
SMARCC1-202ENST00000425518 CCDC93Q567U6 631 aa8.65□□□□□ -1.02
SMARCC1-202ENST00000425518 KIF6Q6ZMV9 814 aa8.65□□□□□ -1.02
SMARCC1-202ENST00000425518 VSTM4Q8IW00 320 aa8.65□□□□□ -1.02
SMARCC1-202ENST00000425518 TRMT44Q8IYL2 757 aaKnown RBP8.65□□□□□ -1.02
SMARCC1-202ENST00000425518 TBC1D2BQ9UPU7 963 aa8.65□□□□□ -1.02
SMARCC1-202ENST00000425518 SLC12A7Q9Y666 1083 aa8.65□□□□□ -1.02
SMARCC1-202ENST00000425518 POLR3GO15318 223 aaPredicted RBP8.65□□□□□ -1.02
SMARCC1-202ENST00000425518 SSRP1Q08945 709 aaKnown RBP8.65□□□□□ -1.02
SMARCC1-202ENST00000425518 TMCO3Q6UWJ1 677 aa8.65□□□□□ -1.02
SMARCC1-202ENST00000425518 GRAMD1CQ8IYS0 662 aa8.65□□□□□ -1.02
SMARCC1-202ENST00000425518 WWC3Q9ULE0 1092 aa8.65□□□□□ -1.02
SMARCC1-202ENST00000425518 HPSEQ9Y251 543 aa8.65□□□□□ -1.02
SMARCC1-202ENST00000425518 POLR2DO15514 142 aaKnown RBP8.65□□□□□ -1.03
SMARCC1-202ENST00000425518 RANBP6O60518 1105 aaKnown RBP8.65□□□□□ -1.03
SMARCC1-202ENST00000425518 H2AFXP16104 143 aaPredicted RBP8.65□□□□□ -1.03
SMARCC1-202ENST00000425518 GRIN1Q05586 938 aa8.65□□□□□ -1.03
SMARCC1-202ENST00000425518 SAFBQ15424 915 aaKnown RBP eCLIP8.65□□□□□ -1.03
SMARCC1-202ENST00000425518 RESP18Q5W5W9 173 aa8.65□□□□□ -1.03
SMARCC1-202ENST00000425518 DNAJC10Q8IXB1 793 aa8.65□□□□□ -1.03
SMARCC1-202ENST00000425518 NOL10Q9BSC4 688 aaKnown RBP8.65□□□□□ -1.03
SMARCC1-202ENST00000425518 ERVV-2B6SEH9 535 aa8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 SNAP23O00161 211 aa8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 ZSCAN12O43309 604 aa8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 CUTAO60888 179 aa8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 SEC31AO94979 1220 aaKnown RBP8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 GUCY1A2P33402 732 aa8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 PHKA1P46020 1223 aa8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 TRIM65Q6PJ69 517 aa8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 REXO1L1PQ8IX06 675 aa8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 KRI1Q8N9T8 703 aaKnown RBP8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 MAP3K14Q99558 947 aa8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 ARGLU1Q9NWB6 273 aaPredicted RBP8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 PPP2R2CQ9Y2T4 447 aa8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 PCCAP05165 728 aaPredicted RBP8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 PDE6AP16499 860 aa8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 BMP6P22004 513 aa8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 IGDCC4Q8TDY8 1250 aa8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 NUP133Q8WUM0 1156 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms