RNA–Protein interactions for RNA: ENST00000424721.5

VPS8-205, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 653 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-205ENST00000424721 HLFQ16534 295 aa6.95□□□□□ -1.3
VPS8-205ENST00000424721 EML3Q32P44 896 aa6.95□□□□□ -1.3
VPS8-205ENST00000424721 USP17L2Q6R6M4 530 aa6.95□□□□□ -1.3
VPS8-205ENST00000424721 USP50Q70EL3 339 aaPredicted RBP6.95□□□□□ -1.3
VPS8-205ENST00000424721 USP17L1Q7RTZ2 530 aa6.95□□□□□ -1.3
VPS8-205ENST00000424721 TMC4Q7Z404 712 aa6.95□□□□□ -1.3
VPS8-205ENST00000424721 UTP14AQ9BVJ6 771 aaKnown RBP6.95□□□□□ -1.3
VPS8-205ENST00000424721 TFIP11Q9UBB9 837 aaKnown RBP6.95□□□□□ -1.3
VPS8-205ENST00000424721 MKRN1Q9UHC7 482 aaKnown RBP6.95□□□□□ -1.3
VPS8-205ENST00000424721 TSPYL4Q9UJ04 414 aa6.95□□□□□ -1.3
VPS8-205ENST00000424721 GJA3Q9Y6H8 435 aa6.95□□□□□ -1.3
VPS8-205ENST00000424721 KIAA1551Q9HCM1 1747 aa6.95□□□□□ -1.3
VPS8-205ENST00000424721 BRCA1P38398 1863 aaKnown RBP6.94□□□□□ -1.3
VPS8-205ENST00000424721 TNRC6CQ9HCJ0 1690 aaKnown RBP6.94□□□□□ -1.3
VPS8-205ENST00000424721 PRAMEF22A3QJZ6 481 aa6.94□□□□□ -1.3
VPS8-205ENST00000424721 LCE2BO14633 110 aa6.94□□□□□ -1.3
VPS8-205ENST00000424721 ZIC2O95409 532 aaPredicted RBP6.94□□□□□ -1.3
VPS8-205ENST00000424721 EIF2S2P20042 333 aaKnown RBP6.94□□□□□ -1.3
VPS8-205ENST00000424721 RIPK4P57078 832 aa6.94□□□□□ -1.3
VPS8-205ENST00000424721 TNIP1Q15025 636 aa6.94□□□□□ -1.3
VPS8-205ENST00000424721 CRY2Q49AN0 593 aa6.94□□□□□ -1.3
VPS8-205ENST00000424721 SLC10A5Q5PT55 438 aa6.94□□□□□ -1.3
VPS8-205ENST00000424721 PPP1R26Q5T8A7 1209 aaPredicted RBP6.94□□□□□ -1.3
VPS8-205ENST00000424721 DDX46Q7L014 1031 aaKnown RBP6.94□□□□□ -1.3
VPS8-205ENST00000424721 NIM1KQ8IY84 436 aa6.94□□□□□ -1.3
VPS8-205ENST00000424721 ZNF34Q8IZ26 560 aa6.94□□□□□ -1.3
VPS8-205ENST00000424721 PHTF2Q8N3S3 785 aa6.94□□□□□ -1.3
VPS8-205ENST00000424721 PBXIP1Q96AQ6 731 aa6.94□□□□□ -1.3
VPS8-205ENST00000424721 ITPKCQ96DU7 683 aa6.94□□□□□ -1.3
VPS8-205ENST00000424721 KLF16Q9BXK1 252 aaPredicted RBP6.94□□□□□ -1.3
VPS8-205ENST00000424721 RNF123Q5XPI4 1314 aa6.94□□□□□ -1.3
VPS8-205ENST00000424721 SBF1O95248 1867 aa6.94□□□□□ -1.3
VPS8-205ENST00000424721 NRXN2Q9P2S2 1712 aa6.93□□□□□ -1.3
VPS8-205ENST00000424721 ERVH48-1M5A8F1 160 aa6.93□□□□□ -1.3
VPS8-205ENST00000424721 AXIN1O15169 862 aa6.93□□□□□ -1.3
VPS8-205ENST00000424721 TIMP2P16035 220 aa6.93□□□□□ -1.3
VPS8-205ENST00000424721 GPTP24298 496 aa6.93□□□□□ -1.3
VPS8-205ENST00000424721 NCOA4Q13772 614 aa6.93□□□□□ -1.3
VPS8-205ENST00000424721 CTC1Q2NKJ3 1217 aa6.93□□□□□ -1.3
VPS8-205ENST00000424721 SUSD4Q5VX71 490 aa6.93□□□□□ -1.3
VPS8-205ENST00000424721 TRAF7Q6Q0C0 670 aa6.93□□□□□ -1.3
VPS8-205ENST00000424721 SP8Q8IXZ3 490 aa6.93□□□□□ -1.3
VPS8-205ENST00000424721 PLEKHF1Q96S99 279 aa6.93□□□□□ -1.3
VPS8-205ENST00000424721 ZFAND3Q9H8U3 227 aa6.93□□□□□ -1.3
VPS8-205ENST00000424721 AAASQ9NRG9 546 aa6.93□□□□□ -1.3
VPS8-205ENST00000424721 TMPRSS4Q9NRS4 437 aa6.93□□□□□ -1.3
VPS8-205ENST00000424721 ABT1Q9ULW3 272 aaKnown RBP6.93□□□□□ -1.3
VPS8-205ENST00000424721 ATP6V0A2Q9Y487 856 aa6.93□□□□□ -1.3
VPS8-205ENST00000424721 PCDHB11Q9Y5F2 797 aa6.93□□□□□ -1.3
VPS8-205ENST00000424721 PASKQ96RG2 1323 aa6.93□□□□□ -1.3
VPS8-205ENST00000424721 ADAMTS7Q9UKP4 1686 aa6.93□□□□□ -1.3
VPS8-205ENST00000424721 CNTNAP1P78357 1384 aa6.93□□□□□ -1.3
VPS8-205ENST00000424721 AFDNP55196 1824 aaKnown RBP6.92□□□□□ -1.3
VPS8-205ENST00000424721 RASSF10A6NK89 507 aa6.92□□□□□ -1.3
VPS8-205ENST00000424721 ATP5J2-PTCD1G3V325 749 aa6.92□□□□□ -1.3
VPS8-205ENST00000424721 H7C1D1 291 aa6.92□□□□□ -1.3
VPS8-205ENST00000424721 CAPN5O15484 640 aaPredicted RBP6.92□□□□□ -1.3
VPS8-205ENST00000424721 PPIP5K2O43314 1243 aa6.92□□□□□ -1.3
VPS8-205ENST00000424721 MYCP01106 439 aaPredicted RBP6.92□□□□□ -1.3
VPS8-205ENST00000424721 RFX1P22670 979 aa6.92□□□□□ -1.3
VPS8-205ENST00000424721 VEGFBP49765 207 aa6.92□□□□□ -1.3
VPS8-205ENST00000424721 SMCPP49901 116 aaPredicted RBP6.92□□□□□ -1.3
VPS8-205ENST00000424721 DPP8Q6V1X1 898 aaPredicted RBP6.92□□□□□ -1.3
VPS8-205ENST00000424721 TTLL7Q6ZT98 887 aa6.92□□□□□ -1.3
VPS8-205ENST00000424721 CRIPAKQ8N1N5 446 aa6.92□□□□□ -1.3
VPS8-205ENST00000424721 CCDC85AQ96PX6 553 aaPredicted RBP6.92□□□□□ -1.3
VPS8-205ENST00000424721 BCL2L13Q9BXK5 485 aa6.92□□□□□ -1.3
VPS8-205ENST00000424721 DDX21Q9NR30 783 aaKnown RBP eCLIP6.92□□□□□ -1.3
VPS8-205ENST00000424721 ADARB2Q9NS39 739 aaKnown RBP6.92□□□□□ -1.3
VPS8-205ENST00000424721 TRMT112Q9UI30 125 aaKnown RBP6.92□□□□□ -1.3
VPS8-205ENST00000424721 ZNRF3Q9ULT6 936 aa6.92□□□□□ -1.3
VPS8-205ENST00000424721 NOD1Q9Y239 953 aa6.92□□□□□ -1.3
VPS8-205ENST00000424721 WDR90Q96KV7 1748 aa6.92□□□□□ -1.3
VPS8-205ENST00000424721 IBTKQ9P2D0 1353 aaPredicted RBP6.92□□□□□ -1.3
VPS8-205ENST00000424721 COL3A1P02461 1466 aaPredicted RBP6.92□□□□□ -1.3
VPS8-205ENST00000424721 TCERG1O14776 1098 aaKnown RBP6.91□□□□□ -1.3
VPS8-205ENST00000424721 CA12O43570 354 aa6.91□□□□□ -1.3
VPS8-205ENST00000424721 MAP2K2P36507 400 aa6.91□□□□□ -1.3
VPS8-205ENST00000424721 CALD1Q05682 793 aaKnown RBP6.91□□□□□ -1.3
VPS8-205ENST00000424721 USP4Q13107 963 aa6.91□□□□□ -1.3
VPS8-205ENST00000424721 TCIRG1Q13488 830 aa6.91□□□□□ -1.3
VPS8-205ENST00000424721 WDR43Q15061 677 aaKnown RBP eCLIP6.91□□□□□ -1.3
VPS8-205ENST00000424721 OXLD1Q5BKU9 147 aa6.91□□□□□ -1.3
VPS8-205ENST00000424721 MAP1SQ66K74 1059 aaPredicted RBP6.91□□□□□ -1.3
VPS8-205ENST00000424721 COPS6Q7L5N1 327 aa6.91□□□□□ -1.3
VPS8-205ENST00000424721 TRIM50Q86XT4 487 aa6.91□□□□□ -1.3
VPS8-205ENST00000424721 PGPEP1Q9NXJ5 209 aa6.91□□□□□ -1.3
VPS8-205ENST00000424721 DACH1Q9UI36 760 aa6.91□□□□□ -1.3
VPS8-205ENST00000424721 WDR33Q9C0J8 1336 aaKnown RBP6.91□□□□□ -1.3
VPS8-205ENST00000424721 UBR2Q8IWV8 1755 aa6.9□□□□□ -1.3
VPS8-205ENST00000424721 NTSR2O95665 410 aa6.9□□□□□ -1.3
VPS8-205ENST00000424721 TMPOP42166 694 aaKnown RBP6.9□□□□□ -1.3
VPS8-205ENST00000424721 ATP1A2P50993 1020 aa6.9□□□□□ -1.3
VPS8-205ENST00000424721 AIMP1Q12904 312 aaKnown RBP6.9□□□□□ -1.3
VPS8-205ENST00000424721 CIAPIN1Q6FI81 312 aa6.9□□□□□ -1.3
VPS8-205ENST00000424721 CDC37L1Q7L3B6 337 aa6.9□□□□□ -1.3
VPS8-205ENST00000424721 DEPDC4Q8N2C3 294 aa6.9□□□□□ -1.3
VPS8-205ENST00000424721 GPR101Q96P66 508 aaPredicted RBP6.9□□□□□ -1.3
VPS8-205ENST00000424721 EYA3Q99504 573 aa6.9□□□□□ -1.3
VPS8-205ENST00000424721 RTFDC1Q9BY42 306 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms