RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 PWP2Q15269 919 aaKnown RBP5.12□□□□□ -1.59
SF3B1-205ENST00000424674 POU4F3Q15319 338 aa5.12□□□□□ -1.59
SF3B1-205ENST00000424674 ZNF423Q2M1K9 1284 aa5.12□□□□□ -1.59
SF3B1-205ENST00000424674 GORABQ5T7V8 394 aa5.12□□□□□ -1.59
SF3B1-205ENST00000424674 C2CD4AQ8NCU7 369 aaPredicted RBP5.12□□□□□ -1.59
SF3B1-205ENST00000424674 GIMAP7Q8NHV1 300 aa5.12□□□□□ -1.59
SF3B1-205ENST00000424674 DDX54Q8TDD1 881 aaKnown RBP5.12□□□□□ -1.59
SF3B1-205ENST00000424674 MICAL1Q8TDZ2 1067 aa5.12□□□□□ -1.59
SF3B1-205ENST00000424674 MFSD14AQ96MC6 490 aa5.12□□□□□ -1.59
SF3B1-205ENST00000424674 YIPF2Q9BWQ6 316 aa5.12□□□□□ -1.59
SF3B1-205ENST00000424674 DNAJC25Q9H1X3 360 aa5.12□□□□□ -1.59
SF3B1-205ENST00000424674 PRDM16Q9HAZ2 1276 aa5.12□□□□□ -1.59
SF3B1-205ENST00000424674 TMA7Q9Y2S6 64 aaKnown RBP5.12□□□□□ -1.59
SF3B1-205ENST00000424674 FAM95CA0A1B0GW59 222 aa5.11□□□□□ -1.59
SF3B1-205ENST00000424674 SOWAHDA6NJG2 315 aa5.11□□□□□ -1.59
SF3B1-205ENST00000424674 EIF1AYO14602 144 aaKnown RBP5.11□□□□□ -1.59
SF3B1-205ENST00000424674 IGHA2P01877 340 aa5.11□□□□□ -1.59
SF3B1-205ENST00000424674 CTSBP07858 339 aa5.11□□□□□ -1.59
SF3B1-205ENST00000424674 DRD2P14416 443 aa5.11□□□□□ -1.59
SF3B1-205ENST00000424674 CCDC181Q5TID7 509 aa5.11□□□□□ -1.59
SF3B1-205ENST00000424674 GIMAP6Q6P9H5 292 aa5.11□□□□□ -1.59
SF3B1-205ENST00000424674 PAOXQ6QHF9 649 aa5.11□□□□□ -1.59
SF3B1-205ENST00000424674 FBLIM1Q8WUP2 373 aa5.11□□□□□ -1.59
SF3B1-205ENST00000424674 CCDC74AQ96AQ1 378 aa5.11□□□□□ -1.59
SF3B1-205ENST00000424674 DMRTB1Q96MA1 342 aa5.11□□□□□ -1.59
SF3B1-205ENST00000424674 CORO1BQ9BR76 489 aa5.11□□□□□ -1.59
SF3B1-205ENST00000424674 TRIM56Q9BRZ2 755 aaKnown RBP5.11□□□□□ -1.59
SF3B1-205ENST00000424674 NIF3L1Q9GZT8 377 aa5.11□□□□□ -1.59
SF3B1-205ENST00000424674 ZFYVE1Q9HBF4 777 aa5.11□□□□□ -1.59
SF3B1-205ENST00000424674 METTL14Q9HCE5 456 aaKnown RBP5.11□□□□□ -1.59
SF3B1-205ENST00000424674 ABCB6Q9NP58 842 aa5.11□□□□□ -1.59
SF3B1-205ENST00000424674 GADD45BO75293 160 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-205ENST00000424674 F13BP05160 661 aa5.1□□□□□ -1.59
SF3B1-205ENST00000424674 PTPN12Q05209 780 aaKnown RBP5.1□□□□□ -1.59
SF3B1-205ENST00000424674 NFKBIBQ15653 356 aa5.1□□□□□ -1.59
SF3B1-205ENST00000424674 CPSF6Q16630 551 aaKnown RBP eCLIP5.1□□□□□ -1.59
SF3B1-205ENST00000424674 MCTP1Q6DN14 999 aa5.1□□□□□ -1.59
SF3B1-205ENST00000424674 CDPF1Q6NVV7 123 aa5.1□□□□□ -1.59
SF3B1-205ENST00000424674 PRPF40BQ6NWY9 871 aaKnown RBP5.1□□□□□ -1.59
SF3B1-205ENST00000424674 TMED8Q6PL24 325 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-205ENST00000424674 DPH6Q7L8W6 267 aa5.1□□□□□ -1.59
SF3B1-205ENST00000424674 DTX1Q86Y01 620 aa5.1□□□□□ -1.59
SF3B1-205ENST00000424674 FBXL6Q8N531 539 aa5.1□□□□□ -1.59
SF3B1-205ENST00000424674 ALKBH8Q96BT7 664 aaKnown RBP5.1□□□□□ -1.59
SF3B1-205ENST00000424674 OSBPL1AQ9BXW6 950 aa5.1□□□□□ -1.59
SF3B1-205ENST00000424674 RBCK1Q9BYM8 510 aa5.1□□□□□ -1.59
SF3B1-205ENST00000424674 ATG3Q9NT62 314 aa5.1□□□□□ -1.59
SF3B1-205ENST00000424674 PIM2Q9P1W9 311 aa5.1□□□□□ -1.59
SF3B1-205ENST00000424674 ACTL7BQ9Y614 415 aa5.1□□□□□ -1.59
SF3B1-205ENST00000424674 HMGB1P1B2RPK0 211 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-205ENST00000424674 TPD52L2O43399 206 aaKnown RBP5.09□□□□□ -1.59
SF3B1-205ENST00000424674 RAB6AP20340 208 aa5.09□□□□□ -1.59
SF3B1-205ENST00000424674 GP2P55259 537 aaKnown RBP5.09□□□□□ -1.59
SF3B1-205ENST00000424674 SETQ01105 290 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-205ENST00000424674 AP3B2Q13367 1082 aa5.09□□□□□ -1.59
SF3B1-205ENST00000424674 AKAP4Q5JQC9 854 aa5.09□□□□□ -1.59
SF3B1-205ENST00000424674 EZH1Q92800 747 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-205ENST00000424674 CSRNP1Q96S65 589 aa5.09□□□□□ -1.59
SF3B1-205ENST00000424674 METTL22Q9BUU2 404 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-205ENST00000424674 AP4E1Q9UPM8 1137 aa5.09□□□□□ -1.59
SF3B1-205ENST00000424674 TRAK1Q9UPV9 953 aa5.09□□□□□ -1.59
SF3B1-205ENST00000424674 LEMD3Q9Y2U8 911 aa5.09□□□□□ -1.59
SF3B1-205ENST00000424674 ECEL1O95672 775 aa5.08□□□□□ -1.6
SF3B1-205ENST00000424674 RECKO95980 971 aa5.08□□□□□ -1.6
SF3B1-205ENST00000424674 IRAK1P51617 712 aa5.08□□□□□ -1.6
SF3B1-205ENST00000424674 PDE3AQ14432 1141 aa5.08□□□□□ -1.6
SF3B1-205ENST00000424674 RPS26P11Q5JNZ5 115 aaPredicted RBP5.08□□□□□ -1.6
SF3B1-205ENST00000424674 NPAS4Q8IUM7 802 aa5.08□□□□□ -1.6
SF3B1-205ENST00000424674 TBC1D32Q96NH3 1257 aa5.08□□□□□ -1.6
SF3B1-205ENST00000424674 RAD18Q9NS91 495 aa5.08□□□□□ -1.6
SF3B1-205ENST00000424674 PRKAG2Q9UGJ0 569 aa5.08□□□□□ -1.6
SF3B1-205ENST00000424674 OAS3Q9Y6K5 1087 aaKnown RBP5.08□□□□□ -1.6
SF3B1-205ENST00000424674 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-205ENST00000424674 TMEM238LA0A1B0GVL6 79 aa5.07□□□□□ -1.6
SF3B1-205ENST00000424674 RAB11FIP3O75154 756 aa5.07□□□□□ -1.6
SF3B1-205ENST00000424674 ADAMTS4O75173 837 aa5.07□□□□□ -1.6
SF3B1-205ENST00000424674 FOSL1P15407 271 aa5.07□□□□□ -1.6
SF3B1-205ENST00000424674 ERCC5P28715 1186 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-205ENST00000424674 HOXA10P31260 410 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-205ENST00000424674 MAP7Q14244 749 aa5.07□□□□□ -1.6
SF3B1-205ENST00000424674 GRM2Q14416 872 aa5.07□□□□□ -1.6
SF3B1-205ENST00000424674 DYMQ7RTS9 669 aa5.07□□□□□ -1.6
SF3B1-205ENST00000424674 ZAR1Q86SH2 424 aa5.07□□□□□ -1.6
SF3B1-205ENST00000424674 GLIS3Q8NEA6 775 aa5.07□□□□□ -1.6
SF3B1-205ENST00000424674 WDR18Q9BV38 432 aa5.07□□□□□ -1.6
SF3B1-205ENST00000424674 KRTAP9-2Q9BYQ4 174 aa5.07□□□□□ -1.6
SF3B1-205ENST00000424674 SUGT1Q9Y2Z0 365 aa5.07□□□□□ -1.6
SF3B1-205ENST00000424674 COL17A1Q9UMD9 1497 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-205ENST00000424674 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-205ENST00000424674 AOC2O75106 756 aa5.06□□□□□ -1.6
SF3B1-205ENST00000424674 WNT11O96014 354 aa5.06□□□□□ -1.6
SF3B1-205ENST00000424674 MAPK1P28482 360 aa5.06□□□□□ -1.6
SF3B1-205ENST00000424674 ADMP35318 185 aa5.06□□□□□ -1.6
SF3B1-205ENST00000424674 MSMPQ1L6U9 139 aa5.06□□□□□ -1.6
SF3B1-205ENST00000424674 HSP90AB4PQ58FF6 505 aa5.06□□□□□ -1.6
SF3B1-205ENST00000424674 DTHD1Q6ZMT9 781 aa5.06□□□□□ -1.6
SF3B1-205ENST00000424674 TMC7Q7Z402 723 aa5.06□□□□□ -1.6
SF3B1-205ENST00000424674 TEX2Q8IWB9 1127 aa5.06□□□□□ -1.6
SF3B1-205ENST00000424674 SHISA5Q8N114 240 aa5.06□□□□□ -1.6
SF3B1-205ENST00000424674 EPS8L3Q8TE67 593 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms