RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 CRHR2Q13324 411 aa20.06■□□□□ 0.8
DDR1-234ENST00000424544 OTUD7BQ6GQQ9 843 aa20.06■□□□□ 0.8
DDR1-234ENST00000424544 FBXO46Q6PJ61 603 aaPredicted RBP20.06■□□□□ 0.8
DDR1-234ENST00000424544 BRI3BPQ8WY22 251 aa20.06■□□□□ 0.8
DDR1-234ENST00000424544 TMOD2Q9NZR1 351 aa20.06■□□□□ 0.8
DDR1-234ENST00000424544 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.06■□□□□ 0.8
DDR1-234ENST00000424544 ZNF112Q9UJU3 913 aa20.06■□□□□ 0.8
DDR1-234ENST00000424544 SNCAIPQ9Y6H5 919 aa20.06■□□□□ 0.8
DDR1-234ENST00000424544 TNRC18O15417 2968 aaPredicted RBP20.06■□□□□ 0.8
DDR1-234ENST00000424544 CENPFP49454 3210 aa20.06■□□□□ 0.8
DDR1-234ENST00000424544 LDHBP07195 334 aaKnown RBP20.05■□□□□ 0.8
DDR1-234ENST00000424544 TFCP2Q12800 502 aa20.05■□□□□ 0.8
DDR1-234ENST00000424544 NFIAQ12857 509 aa20.05■□□□□ 0.8
DDR1-234ENST00000424544 FAM163AQ96GL9 167 aaPredicted RBP20.05■□□□□ 0.8
DDR1-234ENST00000424544 XAGE2Q96GT9 111 aa20.05■□□□□ 0.8
DDR1-234ENST00000424544 FAM198AQ9UFP1 575 aa20.05■□□□□ 0.8
DDR1-234ENST00000424544 A0A1B0GUL7 405 aa20.04■□□□□ 0.8
DDR1-234ENST00000424544 GNAI2P04899 355 aa20.04■□□□□ 0.8
DDR1-234ENST00000424544 GTF2A2P52657 109 aa20.04■□□□□ 0.8
DDR1-234ENST00000424544 ERO1BQ86YB8 467 aa20.04■□□□□ 0.8
DDR1-234ENST00000424544 HOOK2Q96ED9 719 aa20.04■□□□□ 0.8
DDR1-234ENST00000424544 AKAP2Q9Y2D5 859 aa20.04■□□□□ 0.8
DDR1-234ENST00000424544 GAKO14976 1311 aa20.03■□□□□ 0.8
DDR1-234ENST00000424544 PNMA6EA0A0J9YXQ4 647 aa20.03■□□□□ 0.8
DDR1-234ENST00000424544 CAP1Q01518 475 aa20.03■□□□□ 0.8
DDR1-234ENST00000424544 RASGRF1Q13972 1273 aa20.03■□□□□ 0.8
DDR1-234ENST00000424544 ZKSCAN4Q969J2 545 aaPredicted RBP20.03■□□□□ 0.8
DDR1-234ENST00000424544 CSADQ9Y600 493 aa20.03■□□□□ 0.8
DDR1-234ENST00000424544 MYH13Q9UKX3 1938 aa20.03■□□□□ 0.8
DDR1-234ENST00000424544 CENPBP07199 599 aaPredicted RBP20.02■□□□□ 0.8
DDR1-234ENST00000424544 MAP3K10Q02779 954 aa20.02■□□□□ 0.8
DDR1-234ENST00000424544 MIGA2Q7L4E1 593 aa20.02■□□□□ 0.8
DDR1-234ENST00000424544 ZFPM1Q8IX07 1006 aa20.02■□□□□ 0.8
DDR1-234ENST00000424544 ZGPATQ8N5A5 531 aaKnown RBP20.02■□□□□ 0.8
DDR1-234ENST00000424544 TMEM57Q8N5G2 664 aa20.02■□□□□ 0.8
DDR1-234ENST00000424544 FRAT1Q92837 279 aaPredicted RBP20.02■□□□□ 0.8
DDR1-234ENST00000424544 WRNIP1Q96S55 665 aa20.02■□□□□ 0.8
DDR1-234ENST00000424544 IDI2Q9BXS1 227 aa20.02■□□□□ 0.8
DDR1-234ENST00000424544 USP40Q9NVE5 1235 aa20.02■□□□□ 0.8
DDR1-234ENST00000424544 CCL15-CCL14A0A0B4J2E2 113 aa20.01■□□□□ 0.79
DDR1-234ENST00000424544 IRF6O14896 467 aa20.01■□□□□ 0.79
DDR1-234ENST00000424544 SOX10P56693 466 aa20.01■□□□□ 0.79
DDR1-234ENST00000424544 CCL15Q16663 113 aa20.01■□□□□ 0.79
DDR1-234ENST00000424544 ZKSCAN2Q63HK3 967 aa20.01■□□□□ 0.79
DDR1-234ENST00000424544 DCAF15Q66K64 600 aa20.01■□□□□ 0.79
DDR1-234ENST00000424544 OTOP1Q7RTM1 612 aa20.01■□□□□ 0.79
DDR1-234ENST00000424544 FAM43AQ8N2R8 423 aa20.01■□□□□ 0.79
DDR1-234ENST00000424544 ZNF384Q8TF68 577 aa20.01■□□□□ 0.79
DDR1-234ENST00000424544 CLUAP1Q96AJ1 413 aa20.01■□□□□ 0.79
DDR1-234ENST00000424544 ZNF341Q9BYN7 854 aa20.01■□□□□ 0.79
DDR1-234ENST00000424544 BRCA2P51587 3418 aa20.01■□□□□ 0.79
DDR1-234ENST00000424544 TCP10Q12799 353 aa20■□□□□ 0.79
DDR1-234ENST00000424544 PPIL2Q13356 520 aa20■□□□□ 0.79
DDR1-234ENST00000424544 OTUD5Q96G74 571 aa20■□□□□ 0.79
DDR1-234ENST00000424544 ATRNL1Q5VV63 1379 aa19.99■□□□□ 0.79
DDR1-234ENST00000424544 INPP5BP32019 993 aa19.99■□□□□ 0.79
DDR1-234ENST00000424544 SP3Q02447 781 aa19.99■□□□□ 0.79
DDR1-234ENST00000424544 PPATQ06203 517 aa19.99■□□□□ 0.79
DDR1-234ENST00000424544 POLA2Q14181 598 aa19.99■□□□□ 0.79
DDR1-234ENST00000424544 MVPQ14764 893 aaKnown RBP19.99■□□□□ 0.79
DDR1-234ENST00000424544 SSH3Q8TE77 659 aa19.99■□□□□ 0.79
DDR1-234ENST00000424544 ERO1AQ96HE7 468 aa19.99■□□□□ 0.79
DDR1-234ENST00000424544 ZCCHC17Q9NP64 241 aaKnown RBP19.99■□□□□ 0.79
DDR1-234ENST00000424544 TRIM17Q9Y577 477 aa19.99■□□□□ 0.79
DDR1-234ENST00000424544 ENTPD3O75355 529 aa19.98■□□□□ 0.79
DDR1-234ENST00000424544 CETPP11597 493 aa19.98■□□□□ 0.79
DDR1-234ENST00000424544 ATP8B2P98198 1209 aa19.98■□□□□ 0.79
DDR1-234ENST00000424544 SH3BP5LQ7L8J4 393 aa19.98■□□□□ 0.79
DDR1-234ENST00000424544 HMG20BQ9P0W2 317 aa19.98■□□□□ 0.79
DDR1-234ENST00000424544 PTPN22Q9Y2R2 807 aa19.98■□□□□ 0.79
DDR1-234ENST00000424544 PDE4DIPQ5VU43 2346 aa19.98■□□□□ 0.79
DDR1-234ENST00000424544 MKI67P46013 3256 aaKnown RBP19.98■□□□□ 0.79
DDR1-234ENST00000424544 RFX7Q2KHR2 1363 aa19.97■□□□□ 0.79
DDR1-234ENST00000424544 GPR75-ASB3A0A0A6YYF3 556 aa19.97■□□□□ 0.79
DDR1-234ENST00000424544 PHF20L1A8MW92 1017 aa19.97■□□□□ 0.79
DDR1-234ENST00000424544 ZBTB7BO15156 539 aaPredicted RBP19.97■□□□□ 0.79
DDR1-234ENST00000424544 NOL9Q5SY16 702 aaKnown RBP19.97■□□□□ 0.79
DDR1-234ENST00000424544 SPTY2D1Q68D10 685 aaPredicted RBP19.97■□□□□ 0.79
DDR1-234ENST00000424544 NEUROD6Q96NK8 337 aa19.97■□□□□ 0.79
DDR1-234ENST00000424544 ZFYVE28Q9HCC9 887 aa19.97■□□□□ 0.79
DDR1-234ENST00000424544 ABCF2Q9UG63 623 aa19.97■□□□□ 0.79
DDR1-234ENST00000424544 KCNH4Q9UQ05 1017 aa19.97■□□□□ 0.79
DDR1-234ENST00000424544 MYH2Q9UKX2 1941 aa19.96■□□□□ 0.79
DDR1-234ENST00000424544 BTBD19C9JJ37 291 aa19.96■□□□□ 0.79
DDR1-234ENST00000424544 NPM3O75607 178 aaKnown RBP19.96■□□□□ 0.79
DDR1-234ENST00000424544 WDHD1O75717 1129 aaPredicted RBP19.96■□□□□ 0.79
DDR1-234ENST00000424544 ARID4AP29374 1257 aaPredicted RBP19.96■□□□□ 0.79
DDR1-234ENST00000424544 RGS3P49796 1198 aa19.96■□□□□ 0.79
DDR1-234ENST00000424544 G3BP1Q13283 466 aaKnown RBP eCLIP19.96■□□□□ 0.79
DDR1-234ENST00000424544 SNAPC2Q13487 334 aa19.96■□□□□ 0.79
DDR1-234ENST00000424544 MOGSQ13724 837 aa19.96■□□□□ 0.79
DDR1-234ENST00000424544 CD99L2Q8TCZ2 262 aa19.96■□□□□ 0.79
DDR1-234ENST00000424544 GPR108Q9NPR9 543 aa19.96■□□□□ 0.79
DDR1-234ENST00000424544 TLR2O60603 784 aa19.95■□□□□ 0.78
DDR1-234ENST00000424544 RLBP1P12271 317 aa19.95■□□□□ 0.78
DDR1-234ENST00000424544 RHBDL3P58872 404 aa19.95■□□□□ 0.78
DDR1-234ENST00000424544 MECOMQ03112 1051 aa19.95■□□□□ 0.78
DDR1-234ENST00000424544 TAF1CQ15572 869 aaPredicted RBP19.95■□□□□ 0.78
DDR1-234ENST00000424544 SLF2Q8IX21 1173 aa19.95■□□□□ 0.78
DDR1-234ENST00000424544 SPATA5Q8NB90 893 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms