RNA–Protein interactions for RNA: ENST00000424463.4

VPS8-204, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-204ENST00000424463 FAM227BQ96M60 508 aa9.89□□□□□ -0.83
VPS8-204ENST00000424463 TRERF1Q96PN7 1200 aa9.89□□□□□ -0.83
VPS8-204ENST00000424463 RABL2BQ9UNT1 228 aa9.89□□□□□ -0.83
VPS8-204ENST00000424463 ITGB4P16144 1822 aa9.89□□□□□ -0.83
VPS8-204ENST00000424463 ST18O60284 1047 aa9.88□□□□□ -0.83
VPS8-204ENST00000424463 MSNP26038 577 aaKnown RBP9.88□□□□□ -0.83
VPS8-204ENST00000424463 TRIM28Q13263 835 aaKnown RBP9.88□□□□□ -0.83
VPS8-204ENST00000424463 HS1BP3Q53T59 392 aa9.88□□□□□ -0.83
VPS8-204ENST00000424463 GIGYF2Q6Y7W6 1299 aaKnown RBP9.88□□□□□ -0.83
VPS8-204ENST00000424463 CCDC26Q8TAB7 109 aa9.88□□□□□ -0.83
VPS8-204ENST00000424463 UPF3BQ9BZI7 483 aaKnown RBP9.88□□□□□ -0.83
VPS8-204ENST00000424463 FBXO9Q9UK97 447 aaPredicted RBP9.88□□□□□ -0.83
VPS8-204ENST00000424463 CHGBP05060 677 aa9.88□□□□□ -0.83
VPS8-204ENST00000424463 HSPA4P34932 840 aa9.88□□□□□ -0.83
VPS8-204ENST00000424463 ZNF394Q53GI3 561 aa9.88□□□□□ -0.83
VPS8-204ENST00000424463 WWC2Q6AWC2 1192 aa9.88□□□□□ -0.83
VPS8-204ENST00000424463 BARGINQ6ZT62 677 aa9.88□□□□□ -0.83
VPS8-204ENST00000424463 RASEFQ8IZ41 740 aa9.88□□□□□ -0.83
VPS8-204ENST00000424463 THOC1Q96FV9 657 aaKnown RBP9.88□□□□□ -0.83
VPS8-204ENST00000424463 NEUROD6Q96NK8 337 aa9.88□□□□□ -0.83
VPS8-204ENST00000424463 PLCH1Q4KWH8 1693 aa9.87□□□□□ -0.83
VPS8-204ENST00000424463 CCDC194A0A1B0GVG4 234 aa9.87□□□□□ -0.83
VPS8-204ENST00000424463 NMIQ13287 307 aaPredicted RBP9.87□□□□□ -0.83
VPS8-204ENST00000424463 PTK7Q13308 1070 aa9.87□□□□□ -0.83
VPS8-204ENST00000424463 INTS5Q6P9B9 1019 aaKnown RBP9.87□□□□□ -0.83
VPS8-204ENST00000424463 NLRP10Q86W26 655 aa9.87□□□□□ -0.83
VPS8-204ENST00000424463 ANKRD13BQ86YJ7 626 aa9.87□□□□□ -0.83
VPS8-204ENST00000424463 ZBTB38Q8NAP3 1195 aaPredicted RBP9.87□□□□□ -0.83
VPS8-204ENST00000424463 NUP188Q5SRE5 1749 aa9.87□□□□□ -0.83
VPS8-204ENST00000424463 PCCAP05165 728 aaPredicted RBP9.87□□□□□ -0.83
VPS8-204ENST00000424463 ATP5JP18859 108 aa9.87□□□□□ -0.83
VPS8-204ENST00000424463 MCM4P33991 863 aa9.87□□□□□ -0.83
VPS8-204ENST00000424463 HNRNPH2P55795 449 aaKnown RBP9.87□□□□□ -0.83
VPS8-204ENST00000424463 KCNQ4P56696 695 aa9.87□□□□□ -0.83
VPS8-204ENST00000424463 SLC7A5Q01650 507 aa9.87□□□□□ -0.83
VPS8-204ENST00000424463 PSMD2Q13200 908 aa9.87□□□□□ -0.83
VPS8-204ENST00000424463 ITPK1Q13572 414 aa9.87□□□□□ -0.83
VPS8-204ENST00000424463 LARP1BQ659C4 914 aaKnown RBP9.87□□□□□ -0.83
VPS8-204ENST00000424463 SUGP1Q8IWZ8 645 aaKnown RBP9.87□□□□□ -0.83
VPS8-204ENST00000424463 ZGPATQ8N5A5 531 aaKnown RBP9.87□□□□□ -0.83
VPS8-204ENST00000424463 FSD1Q9BTV5 496 aa9.87□□□□□ -0.83
VPS8-204ENST00000424463 SNX14Q9Y5W7 946 aa9.87□□□□□ -0.83
VPS8-204ENST00000424463 EYA2O00167 538 aa9.86□□□□□ -0.83
VPS8-204ENST00000424463 WDHD1O75717 1129 aaPredicted RBP9.86□□□□□ -0.83
VPS8-204ENST00000424463 IMPDH2P12268 514 aa9.86□□□□□ -0.83
VPS8-204ENST00000424463 KCNA2P16389 499 aa9.86□□□□□ -0.83
VPS8-204ENST00000424463 ABL2P42684 1182 aa9.86□□□□□ -0.83
VPS8-204ENST00000424463 SLC5A9Q2M3M2 681 aa9.86□□□□□ -0.83
VPS8-204ENST00000424463 C4orf46Q504U0 113 aa9.86□□□□□ -0.83
VPS8-204ENST00000424463 NFXL1Q6ZNB6 911 aa9.86□□□□□ -0.83
VPS8-204ENST00000424463 PTF1AQ7RTS3 328 aa9.86□□□□□ -0.83
VPS8-204ENST00000424463 PRPF38AQ8NAV1 312 aaKnown RBP9.86□□□□□ -0.83
VPS8-204ENST00000424463 IQCGQ9H095 443 aaKnown RBP9.86□□□□□ -0.83
VPS8-204ENST00000424463 TMOD4Q9NZQ9 345 aa9.86□□□□□ -0.83
VPS8-204ENST00000424463 LOC102724428A0A0B4J2F2 783 aa9.86□□□□□ -0.83
VPS8-204ENST00000424463 A0A0D9SFI3 127 aa9.86□□□□□ -0.83
VPS8-204ENST00000424463 FAM177BA6PVY3 158 aa9.86□□□□□ -0.83
VPS8-204ENST00000424463 SLIT2O94813 1529 aa9.86□□□□□ -0.83
VPS8-204ENST00000424463 VDRP11473 427 aa9.86□□□□□ -0.83
VPS8-204ENST00000424463 CPA1P15085 419 aa9.86□□□□□ -0.83
VPS8-204ENST00000424463 CRKLP46109 303 aaKnown RBP9.86□□□□□ -0.83
VPS8-204ENST00000424463 SIK1P57059 783 aa9.86□□□□□ -0.83
VPS8-204ENST00000424463 CCDC57Q2TAC2 916 aa9.86□□□□□ -0.83
VPS8-204ENST00000424463 TBC1D10BQ4KMP7 808 aaPredicted RBP9.86□□□□□ -0.83
VPS8-204ENST00000424463 CCDC178Q5BJE1 867 aa9.86□□□□□ -0.83
VPS8-204ENST00000424463 KLHL10Q6JEL2 608 aa9.86□□□□□ -0.83
VPS8-204ENST00000424463 C1orf131Q8NDD1 294 aaKnown RBP9.86□□□□□ -0.83
VPS8-204ENST00000424463 ENOX1Q8TC92 643 aaKnown RBP9.86□□□□□ -0.83
VPS8-204ENST00000424463 RUFY2Q8WXA3 655 aa9.86□□□□□ -0.83
VPS8-204ENST00000424463 TRMT112Q9UI30 125 aaKnown RBP9.86□□□□□ -0.83
VPS8-204ENST00000424463 KIF5CO60282 957 aa9.85□□□□□ -0.83
VPS8-204ENST00000424463 LMNB1P20700 586 aa9.85□□□□□ -0.83
VPS8-204ENST00000424463 MAP2K2P36507 400 aa9.85□□□□□ -0.83
VPS8-204ENST00000424463 IL15P40933 162 aaPredicted RBP9.85□□□□□ -0.83
VPS8-204ENST00000424463 PKP1Q13835 747 aa9.85□□□□□ -0.83
VPS8-204ENST00000424463 NOLC1Q14978 699 aaKnown RBP eCLIP9.85□□□□□ -0.83
VPS8-204ENST00000424463 RAB3GAP1Q15042 981 aa9.85□□□□□ -0.83
VPS8-204ENST00000424463 NAIF1Q69YI7 327 aaPredicted RBP9.85□□□□□ -0.83
VPS8-204ENST00000424463 MCTP2Q6DN12 878 aa9.85□□□□□ -0.83
VPS8-204ENST00000424463 TMX3Q96JJ7 454 aa9.85□□□□□ -0.83
VPS8-204ENST00000424463 RSPH9Q9H1X1 276 aaPredicted RBP9.85□□□□□ -0.83
VPS8-204ENST00000424463 DEF6Q9H4E7 631 aa9.85□□□□□ -0.83
VPS8-204ENST00000424463 BIN2Q9UBW5 565 aaPredicted RBP9.85□□□□□ -0.83
VPS8-204ENST00000424463 CSF1RP07333 972 aa9.85□□□□□ -0.83
VPS8-204ENST00000424463 IL6STP40189 918 aaPredicted RBP9.85□□□□□ -0.83
VPS8-204ENST00000424463 RWDD2BP57060 319 aa9.85□□□□□ -0.83
VPS8-204ENST00000424463 KIAA2012Q0VF49 1180 aa9.85□□□□□ -0.83
VPS8-204ENST00000424463 CCDC173Q0VFZ6 552 aa9.85□□□□□ -0.83
VPS8-204ENST00000424463 MCM6Q14566 821 aa9.85□□□□□ -0.83
VPS8-204ENST00000424463 SLFNL1Q499Z3 407 aa9.85□□□□□ -0.83
VPS8-204ENST00000424463 FAM182BQ5T319 152 aa9.85□□□□□ -0.83
VPS8-204ENST00000424463 AP1ARQ63HQ0 302 aa9.85□□□□□ -0.83
VPS8-204ENST00000424463 PRPF40BQ6NWY9 871 aaKnown RBP9.85□□□□□ -0.83
VPS8-204ENST00000424463 MYLK4Q86YV6 388 aaPredicted RBP9.85□□□□□ -0.83
VPS8-204ENST00000424463 RBM12BQ8IXT5 1001 aaKnown RBP9.85□□□□□ -0.83
VPS8-204ENST00000424463 PDCL2Q8N4E4 241 aa9.85□□□□□ -0.83
VPS8-204ENST00000424463 GOLGA6L1Q8N7Z2 621 aa9.85□□□□□ -0.83
VPS8-204ENST00000424463 TEKT1Q969V4 418 aa9.85□□□□□ -0.83
VPS8-204ENST00000424463 CCDC87Q9NVE4 849 aa9.85□□□□□ -0.83
VPS8-204ENST00000424463 CIZ1Q9ULV3 898 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms