RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 BCL11AQ9H165 835 aa22.47■■□□□ 1.19
HDAC6-205ENST00000423941 PAG1Q9NWQ8 432 aa22.47■■□□□ 1.19
HDAC6-205ENST00000423941 CNTNAP1P78357 1384 aa22.47■■□□□ 1.19
HDAC6-205ENST00000423941 CEP350Q5VT06 3117 aa22.46■■□□□ 1.19
HDAC6-205ENST00000423941 RASA3Q14644 834 aa22.46■■□□□ 1.19
HDAC6-205ENST00000423941 PRAMEF18Q5VWM3 479 aa22.46■■□□□ 1.19
HDAC6-205ENST00000423941 NAA16Q6N069 864 aaPredicted RBP22.46■■□□□ 1.19
HDAC6-205ENST00000423941 EDC3Q96F86 508 aaKnown RBP22.46■■□□□ 1.19
HDAC6-205ENST00000423941 TEPSINQ96N21 525 aa22.46■■□□□ 1.19
HDAC6-205ENST00000423941 IDI2Q9BXS1 227 aa22.46■■□□□ 1.19
HDAC6-205ENST00000423941 RFX7Q2KHR2 1363 aa22.46■■□□□ 1.19
HDAC6-205ENST00000423941 GOLIM4O00461 696 aa22.45■■□□□ 1.18
HDAC6-205ENST00000423941 MX1P20591 662 aa22.45■■□□□ 1.18
HDAC6-205ENST00000423941 MAP3K12Q12852 859 aa22.45■■□□□ 1.18
HDAC6-205ENST00000423941 ADGRA1Q86SQ6 560 aa22.45■■□□□ 1.18
HDAC6-205ENST00000423941 VEZTQ9HBM0 779 aa22.45■■□□□ 1.18
HDAC6-205ENST00000423941 USP40Q9NVE5 1235 aa22.45■■□□□ 1.18
HDAC6-205ENST00000423941 MYH7P12883 1935 aa22.45■■□□□ 1.18
HDAC6-205ENST00000423941 NPM3O75607 178 aaKnown RBP22.44■■□□□ 1.18
HDAC6-205ENST00000423941 IDH1O75874 414 aaKnown RBP22.44■■□□□ 1.18
HDAC6-205ENST00000423941 BTDP43251 543 aa22.44■■□□□ 1.18
HDAC6-205ENST00000423941 HTRA3P83110 453 aa22.44■■□□□ 1.18
HDAC6-205ENST00000423941 DNAJC2Q99543 621 aaKnown RBP22.44■■□□□ 1.18
HDAC6-205ENST00000423941 LNPKQ9C0E8 428 aa22.44■■□□□ 1.18
HDAC6-205ENST00000423941 ZBTB47Q9UFB7 747 aaPredicted RBP22.44■■□□□ 1.18
HDAC6-205ENST00000423941 FAM198AQ9UFP1 575 aa22.44■■□□□ 1.18
HDAC6-205ENST00000423941 TLL2Q9Y6L7 1015 aa22.44■■□□□ 1.18
HDAC6-205ENST00000423941 CDK5RAP2Q96SN8 1893 aa22.43■■□□□ 1.18
HDAC6-205ENST00000423941 TCP10L2B9ZVM9 353 aa22.43■■□□□ 1.18
HDAC6-205ENST00000423941 GLRX3O76003 335 aaKnown RBP22.43■■□□□ 1.18
HDAC6-205ENST00000423941 CACNB3P54284 484 aa22.43■■□□□ 1.18
HDAC6-205ENST00000423941 PDE1AP54750 535 aa22.43■■□□□ 1.18
HDAC6-205ENST00000423941 TSHZ3Q63HK5 1081 aa22.43■■□□□ 1.18
HDAC6-205ENST00000423941 B4GALNT3Q6L9W6 998 aa22.43■■□□□ 1.18
HDAC6-205ENST00000423941 SAPCD2Q86UD0 394 aa22.43■■□□□ 1.18
HDAC6-205ENST00000423941 HHIPL1Q96JK4 782 aa22.43■■□□□ 1.18
HDAC6-205ENST00000423941 SSC5DA1L4H1 1573 aa22.42■■□□□ 1.18
HDAC6-205ENST00000423941 TCRBV5S4A2TA0A5A2 114 aa22.42■■□□□ 1.18
HDAC6-205ENST00000423941 RASSF10A6NK89 507 aa22.42■■□□□ 1.18
HDAC6-205ENST00000423941 ERC2O15083 957 aa22.42■■□□□ 1.18
HDAC6-205ENST00000423941 WDHD1O75717 1129 aaPredicted RBP22.42■■□□□ 1.18
HDAC6-205ENST00000423941 TNNI2P48788 182 aa22.42■■□□□ 1.18
HDAC6-205ENST00000423941 FKBP1BP68106 108 aa22.42■■□□□ 1.18
HDAC6-205ENST00000423941 NFIAQ12857 509 aa22.42■■□□□ 1.18
HDAC6-205ENST00000423941 MAGEB6Q8N7X4 407 aa22.42■■□□□ 1.18
HDAC6-205ENST00000423941 FAM151AQ8WW52 585 aa22.42■■□□□ 1.18
HDAC6-205ENST00000423941 OSBPL3Q9H4L5 887 aa22.42■■□□□ 1.18
HDAC6-205ENST00000423941 GBA2Q9HCG7 927 aaPredicted RBP22.42■■□□□ 1.18
HDAC6-205ENST00000423941 TMOD2Q9NZR1 351 aa22.42■■□□□ 1.18
HDAC6-205ENST00000423941 FOCADQ5VW36 1801 aa22.42■■□□□ 1.18
HDAC6-205ENST00000423941 PAPPA2Q9BXP8 1791 aa22.42■■□□□ 1.18
HDAC6-205ENST00000423941 RPAP1Q9BWH6 1393 aaPredicted RBP22.41■■□□□ 1.18
HDAC6-205ENST00000423941 CYP7A1P22680 504 aa22.41■■□□□ 1.18
HDAC6-205ENST00000423941 NBPF12Q5TAG4 269 aaPredicted RBP22.41■■□□□ 1.18
HDAC6-205ENST00000423941 TMEM39BQ9GZU3 492 aa22.41■■□□□ 1.18
HDAC6-205ENST00000423941 ENTPD3O75355 529 aa22.4■■□□□ 1.18
HDAC6-205ENST00000423941 PDE6AP16499 860 aa22.4■■□□□ 1.18
HDAC6-205ENST00000423941 SUPT20HL1Q3ZLR7 823 aa22.4■■□□□ 1.18
HDAC6-205ENST00000423941 SLC9C2Q5TAH2 1124 aa22.4■■□□□ 1.18
HDAC6-205ENST00000423941 PLEKHM2Q8IWE5 1019 aa22.4■■□□□ 1.18
HDAC6-205ENST00000423941 C2orf69Q8N8R5 385 aa22.4■■□□□ 1.18
HDAC6-205ENST00000423941 KBTBD3Q8NAB2 608 aa22.4■■□□□ 1.18
HDAC6-205ENST00000423941 ZNF408Q9H9D4 720 aa22.4■■□□□ 1.18
HDAC6-205ENST00000423941 BAG3O95817 575 aa22.39■■□□□ 1.17
HDAC6-205ENST00000423941 PLCG2P16885 1265 aa22.39■■□□□ 1.17
HDAC6-205ENST00000423941 ADD2P35612 726 aa22.39■■□□□ 1.17
HDAC6-205ENST00000423941 MAP3K11Q16584 847 aa22.39■■□□□ 1.17
HDAC6-205ENST00000423941 CERS3Q8IU89 383 aa22.39■■□□□ 1.17
HDAC6-205ENST00000423941 CDAN1Q8IWY9 1227 aa22.39■■□□□ 1.17
HDAC6-205ENST00000423941 DDX4Q9NQI0 724 aaKnown RBP22.39■■□□□ 1.17
HDAC6-205ENST00000423941 NF2P35240 595 aa22.38■■□□□ 1.17
HDAC6-205ENST00000423941 ZFPM1Q8IX07 1006 aa22.38■■□□□ 1.17
HDAC6-205ENST00000423941 RIOK1Q9BRS2 568 aaKnown RBP22.38■■□□□ 1.17
HDAC6-205ENST00000423941 AATFQ9NY61 560 aaKnown RBP eCLIP22.38■■□□□ 1.17
HDAC6-205ENST00000423941 ZNF532Q9HCE3 1301 aa22.37■■□□□ 1.17
HDAC6-205ENST00000423941 RGS3P49796 1198 aa22.37■■□□□ 1.17
HDAC6-205ENST00000423941 UBE3CQ15386 1083 aa22.37■■□□□ 1.17
HDAC6-205ENST00000423941 DEFB115Q30KQ5 88 aa22.37■■□□□ 1.17
HDAC6-205ENST00000423941 LDLRAD1Q5T700 205 aa22.37■■□□□ 1.17
HDAC6-205ENST00000423941 SH3RF3Q8TEJ3 882 aaPredicted RBP22.37■■□□□ 1.17
HDAC6-205ENST00000423941 COL2A1P02458 1487 aaPredicted RBP22.36■■□□□ 1.17
HDAC6-205ENST00000423941 USP2O75604 605 aaPredicted RBP22.36■■□□□ 1.17
HDAC6-205ENST00000423941 PDE4AP27815 886 aa22.36■■□□□ 1.17
HDAC6-205ENST00000423941 MAP3K10Q02779 954 aa22.36■■□□□ 1.17
HDAC6-205ENST00000423941 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.36■■□□□ 1.172e-8■■■■□ 25.1
HDAC6-205ENST00000423941 ATRNL1Q5VV63 1379 aa22.36■■□□□ 1.17
HDAC6-205ENST00000423941 UNCXA6NJT0 531 aa22.35■■□□□ 1.17
HDAC6-205ENST00000423941 DYNLL1P63167 89 aaKnown RBP22.35■■□□□ 1.17
HDAC6-205ENST00000423941 TCP10Q12799 353 aa22.35■■□□□ 1.17
HDAC6-205ENST00000423941 ERICH6BQ5W0A0 696 aa22.35■■□□□ 1.17
HDAC6-205ENST00000423941 MOB2Q70IA6 237 aa22.35■■□□□ 1.17
HDAC6-205ENST00000423941 SH3BP5LQ7L8J4 393 aa22.35■■□□□ 1.17
HDAC6-205ENST00000423941 KLRG1Q96E93 195 aa22.35■■□□□ 1.17
HDAC6-205ENST00000423941 NOL10Q9BSC4 688 aaKnown RBP22.35■■□□□ 1.17
HDAC6-205ENST00000423941 ABT1Q9ULW3 272 aaKnown RBP22.35■■□□□ 1.17
HDAC6-205ENST00000423941 AK9Q5TCS8 1911 aa22.35■■□□□ 1.17
HDAC6-205ENST00000423941 CHGBP05060 677 aa22.34■■□□□ 1.17
HDAC6-205ENST00000423941 HUNKP57058 714 aa22.34■■□□□ 1.17
HDAC6-205ENST00000423941 SLFNL1Q499Z3 407 aa22.34■■□□□ 1.17
HDAC6-205ENST00000423941 ZSCAN25Q6NSZ9 544 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms