RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 LOC102724428A0A0B4J2F2 783 aa4.15□□□□□ -1.74
TOP2A-201ENST00000423485 ARHGEF37A1IGU5 675 aa4.15□□□□□ -1.74
TOP2A-201ENST00000423485 DNM2P50570 870 aa4.15□□□□□ -1.74
TOP2A-201ENST00000423485 SIK1P57059 783 aa4.15□□□□□ -1.74
TOP2A-201ENST00000423485 PUS10Q3MIT2 529 aaKnown RBP4.15□□□□□ -1.74
TOP2A-201ENST00000423485 TTC6Q86TZ1 520 aa4.15□□□□□ -1.74
TOP2A-201ENST00000423485 SLC8A2Q9UPR5 921 aa4.15□□□□□ -1.74
TOP2A-201ENST00000423485 ZC3H4Q9UPT8 1303 aaKnown RBP4.15□□□□□ -1.74
TOP2A-201ENST00000423485 FBLN1P23142 703 aa4.15□□□□□ -1.74
TOP2A-201ENST00000423485 NDUFV1P49821 464 aa4.15□□□□□ -1.74
TOP2A-201ENST00000423485 POLA2Q14181 598 aa4.15□□□□□ -1.74
TOP2A-201ENST00000423485 KIZQ2M2Z5 673 aa4.15□□□□□ -1.74
TOP2A-201ENST00000423485 UTP14CQ5TAP6 766 aaKnown RBP4.15□□□□□ -1.74
TOP2A-201ENST00000423485 RALYLQ86SE5 291 aaKnown RBP4.15□□□□□ -1.74
TOP2A-201ENST00000423485 HOOK3Q86VS8 718 aa4.15□□□□□ -1.74
TOP2A-201ENST00000423485 SHDQ96IW2 340 aa4.15□□□□□ -1.74
TOP2A-201ENST00000423485 LMCD1Q9NZU5 365 aa4.15□□□□□ -1.74
TOP2A-201ENST00000423485 THEGQ9P2T0 379 aa4.15□□□□□ -1.74
TOP2A-201ENST00000423485 ZNRF3Q9ULT6 936 aa4.15□□□□□ -1.74
TOP2A-201ENST00000423485 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.15□□□□□ -1.74
TOP2A-201ENST00000423485 GLI2P10070 1586 aa4.15□□□□□ -1.75
TOP2A-201ENST00000423485 CCDC85BQ15834 202 aaPredicted RBP4.15□□□□□ -1.75
TOP2A-201ENST00000423485 MCTP2Q6DN12 878 aa4.15□□□□□ -1.75
TOP2A-201ENST00000423485 CYP4F22Q6NT55 531 aa4.15□□□□□ -1.75
TOP2A-201ENST00000423485 ADAT2Q7Z6V5 191 aaKnown RBP4.15□□□□□ -1.75
TOP2A-201ENST00000423485 ZNF277Q9NRM2 450 aaPredicted RBP4.15□□□□□ -1.75
TOP2A-201ENST00000423485 ITGB4P16144 1822 aa4.15□□□□□ -1.75
TOP2A-201ENST00000423485 MARCKSP29966 332 aaPredicted RBP4.15□□□□□ -1.75
TOP2A-201ENST00000423485 TERF1P54274 439 aa4.15□□□□□ -1.75
TOP2A-201ENST00000423485 TAOK1Q7L7X3 1001 aa4.15□□□□□ -1.75
TOP2A-201ENST00000423485 SLAIN1Q8ND83 568 aa4.15□□□□□ -1.75
TOP2A-201ENST00000423485 TEKT1Q969V4 418 aa4.15□□□□□ -1.75
TOP2A-201ENST00000423485 CNOT7Q9UIV1 285 aaKnown RBP4.15□□□□□ -1.75
TOP2A-201ENST00000423485 POLIQ9UNA4 740 aa4.15□□□□□ -1.75
TOP2A-201ENST00000423485 SRGAP2CP0DJJ0 459 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 CCDC178Q5BJE1 867 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 ZNF790Q6PG37 636 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 RNF169Q8NCN4 708 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 HVCN1Q96D96 273 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 PHTF1Q9UMS5 762 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 SYCE3A1L190 88 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 AMHP03971 560 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 STAG3L1P0CL83 205 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 FKBP4Q02790 459 aaKnown RBP eCLIP4.14□□□□□ -1.75
TOP2A-201ENST00000423485 DZIP1LQ8IYY4 767 aaKnown RBP4.14□□□□□ -1.75
TOP2A-201ENST00000423485 ANKRD13AQ8IZ07 590 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 PCSK9Q8NBP7 692 aaKnown RBP4.14□□□□□ -1.75
TOP2A-201ENST00000423485 IL17RAQ96F46 866 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 ADD3Q9UEY8 706 aaKnown RBP4.14□□□□□ -1.75
TOP2A-201ENST00000423485 TOPAZ1Q8N9V7 1692 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 MRPS5P82675 430 aaKnown RBP4.14□□□□□ -1.75
TOP2A-201ENST00000423485 CT47A1Q5JQC4 288 aaPredicted RBP4.14□□□□□ -1.75
TOP2A-201ENST00000423485 USPL1Q5W0Q7 1092 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 TSEN34Q9BSV6 310 aaKnown RBP4.14□□□□□ -1.75
TOP2A-201ENST00000423485 ZBTB3Q9H5J0 574 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 DIP2CQ9Y2E4 1556 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 LRRC7Q96NW7 1537 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 AKAP12Q02952 1782 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 AKAP9Q99996 3911 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 USP17L3A6NCW0 530 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 USP17L4A6NCW7 530 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 TCP10L2B9ZVM9 353 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 ATN1P54259 1190 aaPredicted RBP4.14□□□□□ -1.75
TOP2A-201ENST00000423485 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.14□□□□□ -1.75
TOP2A-201ENST00000423485 USP17L1Q7RTZ2 530 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 ANKRD35Q8N283 1001 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 EFCAB3Q8N7B9 438 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 ZBTB38Q8NAP3 1195 aaPredicted RBP4.14□□□□□ -1.75
TOP2A-201ENST00000423485 URGCPQ8TCY9 931 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 OSBP2Q969R2 916 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 OTUD5Q96G74 571 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 MAP7D2Q96T17 732 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 CRNKL1Q9BZJ0 848 aaKnown RBP4.14□□□□□ -1.75
TOP2A-201ENST00000423485 ZMYND8Q9ULU4 1186 aaPredicted RBP4.14□□□□□ -1.75
TOP2A-201ENST00000423485 NR2E1Q9Y466 385 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 SLC4A7Q9Y6M7 1214 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 REREQ9P2R6 1566 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 PLSCR1O15162 318 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 NCK2O43639 380 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 LDHBP07195 334 aaKnown RBP4.14□□□□□ -1.75
TOP2A-201ENST00000423485 BPIFB4P59827 614 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 PDE4DQ08499 809 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 MAP3K12Q12852 859 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 HDGFL1Q5TGJ6 251 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 PPP2R2DQ66LE6 453 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 FBXO22Q8NEZ5 403 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 YME1L1Q96TA2 773 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 APOL6Q9BWW8 343 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 NMRK2Q9NPI5 230 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 NOP58Q9Y2X3 529 aaKnown RBP4.14□□□□□ -1.75
TOP2A-201ENST00000423485 SAMM50Q9Y512 469 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 CEP83Q9Y592 693 aa4.14□□□□□ -1.75
TOP2A-201ENST00000423485 ANKRD50Q9ULJ7 1429 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 TET3O43151 1660 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 TRIM6-TRIM34B2RNG4 842 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 TMPOP42166 694 aaKnown RBP4.13□□□□□ -1.75
TOP2A-201ENST00000423485 TDO2P48775 406 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 IRX6P78412 446 aaPredicted RBP4.13□□□□□ -1.75
TOP2A-201ENST00000423485 AASDHQ4L235 1098 aaPredicted RBP4.13□□□□□ -1.75
TOP2A-201ENST00000423485 GPC2Q8N158 579 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms