RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 MROH7-TTC4A0A0A0MT08 1334 aa19.15■□□□□ 0.66
BRAT1-202ENST00000421712 ERC2O15083 957 aa19.14■□□□□ 0.65
BRAT1-202ENST00000421712 RASA3Q14644 834 aa19.14■□□□□ 0.65
BRAT1-202ENST00000421712 MAGEB6Q8N7X4 407 aa19.14■□□□□ 0.65
BRAT1-202ENST00000421712 C2orf69Q8N8R5 385 aa19.14■□□□□ 0.65
BRAT1-202ENST00000421712 OTUD7AQ8TE49 926 aaPredicted RBP19.14■□□□□ 0.65
BRAT1-202ENST00000421712 EDC3Q96F86 508 aaKnown RBP19.14■□□□□ 0.65
BRAT1-202ENST00000421712 FAM163AQ96GL9 167 aaPredicted RBP19.14■□□□□ 0.65
BRAT1-202ENST00000421712 MX1P20591 662 aa19.13■□□□□ 0.65
BRAT1-202ENST00000421712 CYP7A1P22680 504 aa19.13■□□□□ 0.65
BRAT1-202ENST00000421712 TTLL12Q14166 644 aaPredicted RBP19.13■□□□□ 0.65
BRAT1-202ENST00000421712 CHD1LQ86WJ1 897 aa19.13■□□□□ 0.65
BRAT1-202ENST00000421712 PPP2R3BQ9Y5P8 575 aa19.13■□□□□ 0.65
BRAT1-202ENST00000421712 GAKO14976 1311 aa19.13■□□□□ 0.65
BRAT1-202ENST00000421712 ECM29Q5VYK3 1845 aa19.13■□□□□ 0.65
BRAT1-202ENST00000421712 TRPM7Q96QT4 1865 aa19.13■□□□□ 0.65
BRAT1-202ENST00000421712 TTC41PQ6P2S7 1318 aa19.12■□□□□ 0.65
BRAT1-202ENST00000421712 GPR75-ASB3A0A0A6YYF3 556 aa19.12■□□□□ 0.65
BRAT1-202ENST00000421712 IGSF3O75054 1194 aa19.12■□□□□ 0.65
BRAT1-202ENST00000421712 BAG3O95817 575 aa19.12■□□□□ 0.65
BRAT1-202ENST00000421712 NUCB1Q02818 461 aa19.12■□□□□ 0.65
BRAT1-202ENST00000421712 ZNF384Q8TF68 577 aa19.12■□□□□ 0.65
BRAT1-202ENST00000421712 GBA2Q9HCG7 927 aaPredicted RBP19.12■□□□□ 0.65
BRAT1-202ENST00000421712 GLRX3O76003 335 aaKnown RBP19.11■□□□□ 0.65
BRAT1-202ENST00000421712 TCP10Q12799 353 aa19.11■□□□□ 0.65
BRAT1-202ENST00000421712 PRKG1Q13976 671 aa19.11■□□□□ 0.65
BRAT1-202ENST00000421712 SUPT20HL1Q3ZLR7 823 aa19.11■□□□□ 0.65
BRAT1-202ENST00000421712 SLC9C2Q5TAH2 1124 aa19.11■□□□□ 0.65
BRAT1-202ENST00000421712 PAXIP1Q6ZW49 1069 aaPredicted RBP19.11■□□□□ 0.65
BRAT1-202ENST00000421712 AATFQ9NY61 560 aaKnown RBP eCLIP19.11■□□□□ 0.65
BRAT1-202ENST00000421712 MYO5AQ9Y4I1 1855 aaKnown RBP19.11■□□□□ 0.65
BRAT1-202ENST00000421712 MAP4K4O95819 1239 aaPredicted RBP19.1■□□□□ 0.65
BRAT1-202ENST00000421712 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.1■□□□□ 0.652e-6■■■■■ 29.5
BRAT1-202ENST00000421712 TMEM39BQ9GZU3 492 aa19.1■□□□□ 0.65
BRAT1-202ENST00000421712 PLCG2P16885 1265 aa19.09■□□□□ 0.65
BRAT1-202ENST00000421712 DEFB115Q30KQ5 88 aa19.09■□□□□ 0.65
BRAT1-202ENST00000421712 NBPF12Q5TAG4 269 aaPredicted RBP19.09■□□□□ 0.65
BRAT1-202ENST00000421712 FKBP1CQ5VVH2 108 aa19.09■□□□□ 0.65
BRAT1-202ENST00000421712 FAM83AQ86UY5 434 aa19.09■□□□□ 0.65
BRAT1-202ENST00000421712 MKRN1Q9UHC7 482 aaKnown RBP19.09■□□□□ 0.65
BRAT1-202ENST00000421712 PDE6AP16499 860 aa19.08■□□□□ 0.64
BRAT1-202ENST00000421712 PDE1AP54750 535 aa19.08■□□□□ 0.64
BRAT1-202ENST00000421712 HUNKP57058 714 aa19.08■□□□□ 0.64
BRAT1-202ENST00000421712 NFIAQ12857 509 aa19.08■□□□□ 0.64
BRAT1-202ENST00000421712 PICALMQ13492 652 aa19.08■□□□□ 0.64
BRAT1-202ENST00000421712 ARMC9Q7Z3E5 817 aa19.08■□□□□ 0.64
BRAT1-202ENST00000421712 ADGRA1Q86SQ6 560 aa19.08■□□□□ 0.64
BRAT1-202ENST00000421712 ZSCAN29Q8IWY8 852 aaPredicted RBP19.08■□□□□ 0.64
BRAT1-202ENST00000421712 TEX11Q8IYF3 940 aa19.08■□□□□ 0.64
BRAT1-202ENST00000421712 MIGA1Q8NAN2 632 aa19.08■□□□□ 0.64
BRAT1-202ENST00000421712 TLL2Q9Y6L7 1015 aa19.08■□□□□ 0.64
BRAT1-202ENST00000421712 PPP1R12BO60237 982 aaPredicted RBP19.07■□□□□ 0.64
BRAT1-202ENST00000421712 RGS3P49796 1198 aa19.07■□□□□ 0.64
BRAT1-202ENST00000421712 GRM1Q13255 1194 aa19.07■□□□□ 0.64
BRAT1-202ENST00000421712 ZSCAN25Q6NSZ9 544 aa19.07■□□□□ 0.64
BRAT1-202ENST00000421712 TMED8Q6PL24 325 aaPredicted RBP19.07■□□□□ 0.64
BRAT1-202ENST00000421712 SAPCD2Q86UD0 394 aa19.07■□□□□ 0.64
BRAT1-202ENST00000421712 PI4K2BQ8TCG2 481 aa19.07■□□□□ 0.64
BRAT1-202ENST00000421712 SH3RF3Q8TEJ3 882 aaPredicted RBP19.07■□□□□ 0.64
BRAT1-202ENST00000421712 FAM151AQ8WW52 585 aa19.07■□□□□ 0.64
BRAT1-202ENST00000421712 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.07■□□□□ 0.64
BRAT1-202ENST00000421712 AK9Q5TCS8 1911 aa19.07■□□□□ 0.64
BRAT1-202ENST00000421712 CNTNAP1P78357 1384 aa19.06■□□□□ 0.64
BRAT1-202ENST00000421712 ZNF532Q9HCE3 1301 aa19.06■□□□□ 0.64
BRAT1-202ENST00000421712 UBE2Q2LH0YL09 131 aa19.06■□□□□ 0.64
BRAT1-202ENST00000421712 RHBDL3P58872 404 aa19.06■□□□□ 0.64
BRAT1-202ENST00000421712 PPP4CP60510 307 aa19.06■□□□□ 0.64
BRAT1-202ENST00000421712 DYNLL1P63167 89 aaKnown RBP19.06■□□□□ 0.64
BRAT1-202ENST00000421712 MOB2Q70IA6 237 aa19.06■□□□□ 0.64
BRAT1-202ENST00000421712 FAM198AQ9UFP1 575 aa19.06■□□□□ 0.64
BRAT1-202ENST00000421712 STAP2Q9UGK3 403 aa19.06■□□□□ 0.64
BRAT1-202ENST00000421712 ANGEL1Q9UNK9 670 aaKnown RBP19.06■□□□□ 0.64
BRAT1-202ENST00000421712 SALL3Q9BXA9 1300 aa19.05■□□□□ 0.64
BRAT1-202ENST00000421712 MAGEB6P1A0A0J9YX57 407 aa19.05■□□□□ 0.64
BRAT1-202ENST00000421712 WDHD1O75717 1129 aaPredicted RBP19.05■□□□□ 0.64
BRAT1-202ENST00000421712 FKBP1BP68106 108 aa19.05■□□□□ 0.64
BRAT1-202ENST00000421712 TGFBRAP1Q8WUH2 860 aa19.05■□□□□ 0.64
BRAT1-202ENST00000421712 HOOK2Q96ED9 719 aa19.05■□□□□ 0.64
BRAT1-202ENST00000421712 CCDC136Q96JN2 1154 aa19.05■□□□□ 0.64
BRAT1-202ENST00000421712 TEPSINQ96N21 525 aa19.05■□□□□ 0.64
BRAT1-202ENST00000421712 IDI2Q9BXS1 227 aa19.05■□□□□ 0.64
BRAT1-202ENST00000421712 FZD1Q9UP38 647 aa19.05■□□□□ 0.64
BRAT1-202ENST00000421712 MAST2Q6P0Q8 1798 aa19.05■□□□□ 0.64
BRAT1-202ENST00000421712 ENTPD3O75355 529 aa19.04■□□□□ 0.64
BRAT1-202ENST00000421712 ADD2P35612 726 aa19.04■□□□□ 0.64
BRAT1-202ENST00000421712 LRRFIP1Q32MZ4 808 aaKnown RBP19.04■□□□□ 0.64
BRAT1-202ENST00000421712 CERS3Q8IU89 383 aa19.04■□□□□ 0.64
BRAT1-202ENST00000421712 CDAN1Q8IWY9 1227 aa19.04■□□□□ 0.64
BRAT1-202ENST00000421712 ZFPM1Q8IX07 1006 aa19.04■□□□□ 0.64
BRAT1-202ENST00000421712 KBTBD3Q8NAB2 608 aa19.04■□□□□ 0.64
BRAT1-202ENST00000421712 FSD1Q9BTV5 496 aa19.04■□□□□ 0.64
BRAT1-202ENST00000421712 DOCK2Q92608 1830 aa19.03■□□□□ 0.64
BRAT1-202ENST00000421712 RASSF10A6NK89 507 aa19.03■□□□□ 0.64
BRAT1-202ENST00000421712 TRIM6-TRIM34B2RNG4 842 aa19.03■□□□□ 0.64
BRAT1-202ENST00000421712 ECE1P42892 770 aa19.03■□□□□ 0.64
BRAT1-202ENST00000421712 USP5P45974 858 aa19.03■□□□□ 0.64
BRAT1-202ENST00000421712 ZNF157P51786 506 aaPredicted RBP19.03■□□□□ 0.64
BRAT1-202ENST00000421712 SLFNL1Q499Z3 407 aa19.03■□□□□ 0.64
BRAT1-202ENST00000421712 PLEKHM2Q8IWE5 1019 aa19.03■□□□□ 0.64
BRAT1-202ENST00000421712 DNAJC5GQ8N7S2 189 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms