RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 IRF5Q13568 498 aa7.33□□□□□ -1.24
HDAC8-212ENST00000421523 RALBP1Q15311 655 aa7.33□□□□□ -1.24
HDAC8-212ENST00000421523 ANKRD23Q86SG2 305 aa7.33□□□□□ -1.24
HDAC8-212ENST00000421523 TXNRD3Q86VQ6 643 aa7.33□□□□□ -1.24
HDAC8-212ENST00000421523 ERO1BQ86YB8 467 aa7.33□□□□□ -1.24
HDAC8-212ENST00000421523 CERS5Q8N5B7 392 aa7.33□□□□□ -1.24
HDAC8-212ENST00000421523 MTMR14Q8NCE2 650 aa7.33□□□□□ -1.24
HDAC8-212ENST00000421523 WRNIP1Q96S55 665 aa7.33□□□□□ -1.24
HDAC8-212ENST00000421523 PARK7Q99497 189 aaKnown RBP7.33□□□□□ -1.24
HDAC8-212ENST00000421523 TMEM39BQ9GZU3 492 aa7.33□□□□□ -1.24
HDAC8-212ENST00000421523 COA1Q9GZY4 146 aa7.33□□□□□ -1.24
HDAC8-212ENST00000421523 LTBP2Q14767 1821 aa7.33□□□□□ -1.24
HDAC8-212ENST00000421523 MAST2Q6P0Q8 1798 aa7.33□□□□□ -1.24
HDAC8-212ENST00000421523 TCP10L2B9ZVM9 353 aa7.32□□□□□ -1.24
HDAC8-212ENST00000421523 CHL1O00533 1208 aa7.32□□□□□ -1.24
HDAC8-212ENST00000421523 HMGCRP04035 888 aa7.32□□□□□ -1.24
HDAC8-212ENST00000421523 RIPK4P57078 832 aa7.32□□□□□ -1.24
HDAC8-212ENST00000421523 TNFAIP1Q13829 316 aa7.32□□□□□ -1.24
HDAC8-212ENST00000421523 PDE3AQ14432 1141 aa7.32□□□□□ -1.24
HDAC8-212ENST00000421523 TEPSINQ96N21 525 aa7.32□□□□□ -1.24
HDAC8-212ENST00000421523 PNNQ9H307 717 aaKnown RBP7.32□□□□□ -1.24
HDAC8-212ENST00000421523 HMX1Q9NP08 348 aaPredicted RBP7.32□□□□□ -1.24
HDAC8-212ENST00000421523 C11orf16Q9NQ32 467 aa7.32□□□□□ -1.24
HDAC8-212ENST00000421523 PRKAG2Q9UGJ0 569 aa7.32□□□□□ -1.24
HDAC8-212ENST00000421523 OGDHLQ9ULD0 1010 aa7.32□□□□□ -1.24
HDAC8-212ENST00000421523 JAG2Q9Y219 1238 aa7.32□□□□□ -1.24
HDAC8-212ENST00000421523 ARAP2Q8WZ64 1704 aa7.32□□□□□ -1.24
HDAC8-212ENST00000421523 TRANK1O15050 2925 aa7.31□□□□□ -1.24
HDAC8-212ENST00000421523 COL6A1P12109 1028 aa7.31□□□□□ -1.24
HDAC8-212ENST00000421523 ATN1P54259 1190 aaPredicted RBP7.31□□□□□ -1.24
HDAC8-212ENST00000421523 NHLH1Q02575 133 aa7.31□□□□□ -1.24
HDAC8-212ENST00000421523 TFF2Q03403 129 aa7.31□□□□□ -1.24
HDAC8-212ENST00000421523 ANKRD18AQ8IVF6 992 aa7.31□□□□□ -1.24
HDAC8-212ENST00000421523 GAS2L1Q99501 681 aaPredicted RBP7.31□□□□□ -1.24
HDAC8-212ENST00000421523 PRDM5Q9NQX1 630 aaPredicted RBP7.31□□□□□ -1.24
HDAC8-212ENST00000421523 TRIM35Q9UPQ4 493 aa7.31□□□□□ -1.24
HDAC8-212ENST00000421523 SPTBN4Q9H254 2564 aa7.31□□□□□ -1.24
HDAC8-212ENST00000421523 ZFHX4Q86UP3 3567 aa7.3□□□□□ -1.24
HDAC8-212ENST00000421523 NEFMP07197 916 aa7.3□□□□□ -1.24
HDAC8-212ENST00000421523 DNAJB2P25686 324 aa7.3□□□□□ -1.24
HDAC8-212ENST00000421523 CCT4P50991 539 aaKnown RBP7.3□□□□□ -1.24
HDAC8-212ENST00000421523 KCNQ1P51787 676 aa7.3□□□□□ -1.24
HDAC8-212ENST00000421523 SPDYE2Q495Y8 402 aa7.3□□□□□ -1.24
HDAC8-212ENST00000421523 CCDC152Q4G0S7 254 aa7.3□□□□□ -1.24
HDAC8-212ENST00000421523 SAMD1Q6SPF0 538 aaPredicted RBP7.3□□□□□ -1.24
HDAC8-212ENST00000421523 RIC3Q7Z5B4 369 aa7.3□□□□□ -1.24
HDAC8-212ENST00000421523 COA7Q96BR5 231 aa7.3□□□□□ -1.24
HDAC8-212ENST00000421523 RNPC3Q96LT9 517 aaKnown RBP7.3□□□□□ -1.24
HDAC8-212ENST00000421523 PRDM12Q9H4Q4 367 aa7.3□□□□□ -1.24
HDAC8-212ENST00000421523 ZNF576Q9H609 170 aa7.3□□□□□ -1.24
HDAC8-212ENST00000421523 TDRD3Q9H7E2 651 aaKnown RBP7.3□□□□□ -1.24
HDAC8-212ENST00000421523 ZNF70Q9UC06 446 aaPredicted RBP7.3□□□□□ -1.24
HDAC8-212ENST00000421523 TSPYL4Q9UJ04 414 aa7.3□□□□□ -1.24
HDAC8-212ENST00000421523 MYBBP1AQ9BQG0 1328 aaKnown RBP7.29□□□□□ -1.24
HDAC8-212ENST00000421523 MAPK8IP3Q9UPT6 1336 aa7.29□□□□□ -1.24
HDAC8-212ENST00000421523 TRIOO75962 3097 aa7.29□□□□□ -1.24
HDAC8-212ENST00000421523 DOCK3Q8IZD9 2030 aa7.29□□□□□ -1.24
HDAC8-212ENST00000421523 SMIM22K7EJ46 135 aa7.29□□□□□ -1.24
HDAC8-212ENST00000421523 BMP1P13497 986 aa7.29□□□□□ -1.24
HDAC8-212ENST00000421523 PRKAR2AP13861 404 aaKnown RBP7.29□□□□□ -1.24
HDAC8-212ENST00000421523 IGFBP4P22692 258 aa7.29□□□□□ -1.24
HDAC8-212ENST00000421523 MOGSQ13724 837 aa7.29□□□□□ -1.24
HDAC8-212ENST00000421523 KRT24Q2M2I5 525 aa7.29□□□□□ -1.24
HDAC8-212ENST00000421523 MICALL1Q8N3F8 863 aa7.29□□□□□ -1.24
HDAC8-212ENST00000421523 SMCR8Q8TEV9 937 aaPredicted RBP7.29□□□□□ -1.24
HDAC8-212ENST00000421523 BADQ92934 168 aa7.29□□□□□ -1.24
HDAC8-212ENST00000421523 KHSRPQ92945 711 aaKnown RBP eCLIP7.29□□□□□ -1.24
HDAC8-212ENST00000421523 UIMC1Q96RL1 719 aa7.29□□□□□ -1.24
HDAC8-212ENST00000421523 ISCA1Q9BUE6 129 aa7.29□□□□□ -1.24
HDAC8-212ENST00000421523 SENP6Q9GZR1 1112 aaPredicted RBP7.29□□□□□ -1.24
HDAC8-212ENST00000421523 KCNH4Q9UQ05 1017 aa7.29□□□□□ -1.24
HDAC8-212ENST00000421523 MYO9BQ13459 2157 aa7.28□□□□□ -1.24
HDAC8-212ENST00000421523 GPR37L1O60883 481 aa7.28□□□□□ -1.24
HDAC8-212ENST00000421523 ZNF853P0CG23 659 aa7.28□□□□□ -1.24
HDAC8-212ENST00000421523 CACNB3P54284 484 aa7.28□□□□□ -1.24
HDAC8-212ENST00000421523 PPATQ06203 517 aa7.28□□□□□ -1.24
HDAC8-212ENST00000421523 LMOD3Q0VAK6 560 aa7.28□□□□□ -1.24
HDAC8-212ENST00000421523 DDX10Q13206 875 aaKnown RBP7.28□□□□□ -1.24
HDAC8-212ENST00000421523 AKNAD1Q5T1N1 836 aa7.28□□□□□ -1.24
HDAC8-212ENST00000421523 JARID2Q92833 1246 aaPredicted RBP7.28□□□□□ -1.24
HDAC8-212ENST00000421523 RUNDC1Q96C34 613 aa7.28□□□□□ -1.24
HDAC8-212ENST00000421523 TIFAQ96CG3 184 aa7.28□□□□□ -1.24
HDAC8-212ENST00000421523 MINPP1Q9UNW1 487 aa7.28□□□□□ -1.24
HDAC8-212ENST00000421523 ADAMTS8Q9UP79 889 aa7.28□□□□□ -1.24
HDAC8-212ENST00000421523 ATP11BQ9Y2G3 1177 aa7.28□□□□□ -1.24
HDAC8-212ENST00000421523 DCHS1Q96JQ0 3298 aa7.28□□□□□ -1.24
HDAC8-212ENST00000421523 WDR87Q6ZQQ6 2873 aa7.27□□□□□ -1.25
HDAC8-212ENST00000421523 AK9Q5TCS8 1911 aa7.27□□□□□ -1.25
HDAC8-212ENST00000421523 HOXB7P09629 217 aa7.27□□□□□ -1.25
HDAC8-212ENST00000421523 INPP5BP32019 993 aa7.27□□□□□ -1.25
HDAC8-212ENST00000421523 KCNJ4P48050 445 aa7.27□□□□□ -1.25
HDAC8-212ENST00000421523 TNNI2P48788 182 aa7.27□□□□□ -1.25
HDAC8-212ENST00000421523 RTP1P59025 263 aa7.27□□□□□ -1.25
HDAC8-212ENST00000421523 GPAT2Q6NUI2 795 aa7.27□□□□□ -1.25
HDAC8-212ENST00000421523 CCDC146Q8IYE0 955 aa7.27□□□□□ -1.25
HDAC8-212ENST00000421523 ANKRD13CQ8N6S4 541 aa7.27□□□□□ -1.25
HDAC8-212ENST00000421523 TRIB2Q92519 343 aa7.27□□□□□ -1.25
HDAC8-212ENST00000421523 CDC5LQ99459 802 aaKnown RBP7.27□□□□□ -1.25
HDAC8-212ENST00000421523 CD209Q9NNX6 404 aa7.27□□□□□ -1.25
HDAC8-212ENST00000421523 CXXC1Q9P0U4 656 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms