RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 OTOP1Q7RTM1 612 aa23.49■■□□□ 1.35
VARS2-202ENST00000421263 TRIM27P14373 513 aa23.48■■□□□ 1.35
VARS2-202ENST00000421263 ADORA1P30542 326 aa23.48■■□□□ 1.35
VARS2-202ENST00000421263 ERO1BQ86YB8 467 aa23.48■■□□□ 1.35
VARS2-202ENST00000421263 ERO1AQ96HE7 468 aa23.48■■□□□ 1.35
VARS2-202ENST00000421263 WRNIP1Q96S55 665 aa23.48■■□□□ 1.35
VARS2-202ENST00000421263 TRIM17Q9Y577 477 aa23.48■■□□□ 1.35
VARS2-202ENST00000421263 CCL15-CCL14A0A0B4J2E2 113 aa23.47■■□□□ 1.35
VARS2-202ENST00000421263 SRGAP3O43295 1099 aa23.47■■□□□ 1.35
VARS2-202ENST00000421263 BCAR3O75815 825 aa23.47■■□□□ 1.35
VARS2-202ENST00000421263 CCL15Q16663 113 aa23.47■■□□□ 1.35
VARS2-202ENST00000421263 DCAF15Q66K64 600 aa23.47■■□□□ 1.35
VARS2-202ENST00000421263 ATF7IPQ6VMQ6 1270 aa23.47■■□□□ 1.35
VARS2-202ENST00000421263 ZKSCAN4Q969J2 545 aaPredicted RBP23.47■■□□□ 1.35
VARS2-202ENST00000421263 OTUD5Q96G74 571 aa23.47■■□□□ 1.35
VARS2-202ENST00000421263 ZNF112Q9UJU3 913 aa23.47■■□□□ 1.35
VARS2-202ENST00000421263 SP3Q02447 781 aa23.46■■□□□ 1.35
VARS2-202ENST00000421263 NFIAQ12857 509 aa23.46■■□□□ 1.35
VARS2-202ENST00000421263 PDS5AQ29RF7 1337 aaKnown RBP23.46■■□□□ 1.35
VARS2-202ENST00000421263 FAM43AQ8N2R8 423 aa23.46■■□□□ 1.35
VARS2-202ENST00000421263 ZNF341Q9BYN7 854 aa23.46■■□□□ 1.35
VARS2-202ENST00000421263 FAM198AQ9UFP1 575 aa23.46■■□□□ 1.35
VARS2-202ENST00000421263 TNNQ9UQP3 1299 aa23.46■■□□□ 1.35
VARS2-202ENST00000421263 CAP1Q01518 475 aa23.45■■□□□ 1.34
VARS2-202ENST00000421263 MIGA2Q7L4E1 593 aa23.45■■□□□ 1.34
VARS2-202ENST00000421263 ZGPATQ8N5A5 531 aaKnown RBP23.45■■□□□ 1.34
VARS2-202ENST00000421263 CD99L2Q8TCZ2 262 aa23.45■■□□□ 1.34
VARS2-202ENST00000421263 USP40Q9NVE5 1235 aa23.45■■□□□ 1.34
VARS2-202ENST00000421263 AKAP2Q9Y2D5 859 aa23.45■■□□□ 1.34
VARS2-202ENST00000421263 PTPN22Q9Y2R2 807 aa23.45■■□□□ 1.34
VARS2-202ENST00000421263 HTTP42858 3142 aa23.44■■□□□ 1.34
VARS2-202ENST00000421263 A0A1B0GUL7 405 aa23.44■■□□□ 1.34
VARS2-202ENST00000421263 IRF6O14896 467 aa23.44■■□□□ 1.34
VARS2-202ENST00000421263 TFCP2Q12800 502 aa23.44■■□□□ 1.34
VARS2-202ENST00000421263 RASGRF1Q13972 1273 aa23.44■■□□□ 1.34
VARS2-202ENST00000421263 FAM163AQ96GL9 167 aaPredicted RBP23.44■■□□□ 1.34
VARS2-202ENST00000421263 XAGE2Q96GT9 111 aa23.44■■□□□ 1.34
VARS2-202ENST00000421263 ZFYVE28Q9HCC9 887 aa23.44■■□□□ 1.34
VARS2-202ENST00000421263 ZCCHC17Q9NP64 241 aaKnown RBP23.44■■□□□ 1.34
VARS2-202ENST00000421263 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.44■■□□□ 1.34
VARS2-202ENST00000421263 GAKO14976 1311 aa23.43■■□□□ 1.34
VARS2-202ENST00000421263 CETPP11597 493 aa23.43■■□□□ 1.34
VARS2-202ENST00000421263 PPATQ06203 517 aa23.43■■□□□ 1.34
VARS2-202ENST00000421263 TCP10Q12799 353 aa23.43■■□□□ 1.34
VARS2-202ENST00000421263 PPIL2Q13356 520 aa23.43■■□□□ 1.34
VARS2-202ENST00000421263 IDI2Q9BXS1 227 aa23.43■■□□□ 1.34
VARS2-202ENST00000421263 GNAI2P04899 355 aa23.42■■□□□ 1.34
VARS2-202ENST00000421263 INPP5BP32019 993 aa23.42■■□□□ 1.34
VARS2-202ENST00000421263 TAF1CQ15572 869 aaPredicted RBP23.42■■□□□ 1.34
VARS2-202ENST00000421263 FRAT1Q92837 279 aaPredicted RBP23.42■■□□□ 1.34
VARS2-202ENST00000421263 EFCC1Q9HA90 598 aa23.42■■□□□ 1.34
VARS2-202ENST00000421263 SNAPC2Q13487 334 aa23.41■■□□□ 1.34
VARS2-202ENST00000421263 ZFPM1Q8IX07 1006 aa23.41■■□□□ 1.34
VARS2-202ENST00000421263 MYH2Q9UKX2 1941 aa23.4■■□□□ 1.34
VARS2-202ENST00000421263 PNMA6EA0A0J9YXQ4 647 aa23.4■■□□□ 1.34
VARS2-202ENST00000421263 BTBD19C9JJ37 291 aa23.4■■□□□ 1.34
VARS2-202ENST00000421263 MVPQ14764 893 aaKnown RBP23.4■■□□□ 1.34
VARS2-202ENST00000421263 NOL9Q5SY16 702 aaKnown RBP23.4■■□□□ 1.34
VARS2-202ENST00000421263 CLUAP1Q96AJ1 413 aa23.4■■□□□ 1.34
VARS2-202ENST00000421263 TLR2O60603 784 aa23.39■■□□□ 1.33
VARS2-202ENST00000421263 ENTPD3O75355 529 aa23.39■■□□□ 1.33
VARS2-202ENST00000421263 SPTY2D1Q68D10 685 aaPredicted RBP23.39■■□□□ 1.33
VARS2-202ENST00000421263 KCNH4Q9UQ05 1017 aa23.39■■□□□ 1.33
VARS2-202ENST00000421263 PDE4DIPQ5VU43 2346 aa23.38■■□□□ 1.33
VARS2-202ENST00000421263 MAP3K10Q02779 954 aa23.38■■□□□ 1.33
VARS2-202ENST00000421263 ZKSCAN2Q63HK3 967 aa23.38■■□□□ 1.33
VARS2-202ENST00000421263 SLF2Q8IX21 1173 aa23.38■■□□□ 1.33
VARS2-202ENST00000421263 TMEM57Q8N5G2 664 aa23.38■■□□□ 1.33
VARS2-202ENST00000421263 NEUROD6Q96NK8 337 aa23.38■■□□□ 1.33
VARS2-202ENST00000421263 ABCF2Q9UG63 623 aa23.38■■□□□ 1.33
VARS2-202ENST00000421263 RFX7Q2KHR2 1363 aa23.38■■□□□ 1.33
VARS2-202ENST00000421263 ATRNL1Q5VV63 1379 aa23.38■■□□□ 1.33
VARS2-202ENST00000421263 AK9Q5TCS8 1911 aa23.37■■□□□ 1.33
VARS2-202ENST00000421263 RGS3P49796 1198 aa23.37■■□□□ 1.33
VARS2-202ENST00000421263 ARHGEF6Q15052 776 aa23.37■■□□□ 1.33
VARS2-202ENST00000421263 DZIP1Q86YF9 867 aaKnown RBP23.37■■□□□ 1.33
VARS2-202ENST00000421263 ARMC5Q96C12 935 aa23.37■■□□□ 1.33
VARS2-202ENST00000421263 HMG20BQ9P0W2 317 aa23.37■■□□□ 1.33
VARS2-202ENST00000421263 PHF20L1A8MW92 1017 aa23.36■■□□□ 1.33
VARS2-202ENST00000421263 WDHD1O75717 1129 aaPredicted RBP23.36■■□□□ 1.33
VARS2-202ENST00000421263 G3BP1Q13283 466 aaKnown RBP eCLIP23.36■■□□□ 1.33
VARS2-202ENST00000421263 ERICH6Q7L0X2 663 aa23.36■■□□□ 1.33
VARS2-202ENST00000421263 SH3BP5LQ7L8J4 393 aa23.36■■□□□ 1.33
VARS2-202ENST00000421263 MIER1Q8N108 512 aa23.36■■□□□ 1.33
VARS2-202ENST00000421263 ZNF384Q8TF68 577 aa23.36■■□□□ 1.33
VARS2-202ENST00000421263 CENPFP49454 3210 aa23.36■■□□□ 1.33
VARS2-202ENST00000421263 GPR75-ASB3A0A0A6YYF3 556 aa23.35■■□□□ 1.33
VARS2-202ENST00000421263 ARID4AP29374 1257 aaPredicted RBP23.35■■□□□ 1.33
VARS2-202ENST00000421263 MECOMQ03112 1051 aa23.35■■□□□ 1.33
VARS2-202ENST00000421263 MOGSQ13724 837 aa23.35■■□□□ 1.33
VARS2-202ENST00000421263 POLA2Q14181 598 aa23.35■■□□□ 1.33
VARS2-202ENST00000421263 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.35■■□□□ 1.33
VARS2-202ENST00000421263 MROH7-TTC4A0A0A0MT08 1334 aa23.34■■□□□ 1.33
VARS2-202ENST00000421263 RHBDL3P58872 404 aa23.34■■□□□ 1.33
VARS2-202ENST00000421263 ANKRD23Q86SG2 305 aa23.34■■□□□ 1.33
VARS2-202ENST00000421263 SPATA5Q8NB90 893 aa23.34■■□□□ 1.33
VARS2-202ENST00000421263 DDX4Q9NQI0 724 aaKnown RBP23.34■■□□□ 1.33
VARS2-202ENST00000421263 DDTLA6NHG4 134 aaPredicted RBP23.33■■□□□ 1.33
VARS2-202ENST00000421263 NPM3O75607 178 aaKnown RBP23.33■■□□□ 1.33
VARS2-202ENST00000421263 BTDP43251 543 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms