RNA–Protein interactions for RNA: ENST00000421069.5

VPS8-202, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-202ENST00000421069 ARID5AQ03989 594 aa7.33□□□□□ -1.24
VPS8-202ENST00000421069 FMR1NBQ8N0W7 255 aaPredicted RBP7.33□□□□□ -1.24
VPS8-202ENST00000421069 GATAD2BQ8WXI9 593 aa7.33□□□□□ -1.24
VPS8-202ENST00000421069 TRIM11Q96F44 468 aa7.33□□□□□ -1.24
VPS8-202ENST00000421069 LRRC3Q9BY71 257 aa7.33□□□□□ -1.24
VPS8-202ENST00000421069 FAM221AA4D161 298 aa7.32□□□□□ -1.24
VPS8-202ENST00000421069 DLL1O00548 723 aa7.32□□□□□ -1.24
VPS8-202ENST00000421069 MAOBP27338 520 aa7.32□□□□□ -1.24
VPS8-202ENST00000421069 SNRPNP63162 240 aaKnown RBP7.32□□□□□ -1.24
VPS8-202ENST00000421069 COL9A2Q14055 689 aaPredicted RBP7.32□□□□□ -1.24
VPS8-202ENST00000421069 BNC2Q6ZN30 1099 aaPredicted RBP7.32□□□□□ -1.24
VPS8-202ENST00000421069 KCNB2Q92953 911 aa7.32□□□□□ -1.24
VPS8-202ENST00000421069 GAL3ST3Q96A11 431 aa7.32□□□□□ -1.24
VPS8-202ENST00000421069 SEC16BQ96JE7 1060 aa7.32□□□□□ -1.24
VPS8-202ENST00000421069 PLVAPQ9BX97 442 aa7.32□□□□□ -1.24
VPS8-202ENST00000421069 CILPO75339 1184 aa7.31□□□□□ -1.24
VPS8-202ENST00000421069 ATF4P18848 351 aaPredicted RBP7.31□□□□□ -1.24
VPS8-202ENST00000421069 LORP23490 312 aaPredicted RBP7.31□□□□□ -1.24
VPS8-202ENST00000421069 FOXD4L6Q3SYB3 417 aaPredicted RBP7.31□□□□□ -1.24
VPS8-202ENST00000421069 MAP1SQ66K74 1059 aaPredicted RBP7.31□□□□□ -1.24
VPS8-202ENST00000421069 FOXD4L3Q6VB84 417 aaPredicted RBP7.31□□□□□ -1.24
VPS8-202ENST00000421069 SYNGAP1Q96PV0 1343 aa7.3□□□□□ -1.24
VPS8-202ENST00000421069 LOC100289279A0A1B0GTE1 492 aa7.3□□□□□ -1.24
VPS8-202ENST00000421069 ADAM11O75078 769 aa7.3□□□□□ -1.24
VPS8-202ENST00000421069 F13A1P00488 732 aa7.3□□□□□ -1.24
VPS8-202ENST00000421069 NLRP12P59046 1061 aa7.3□□□□□ -1.24
VPS8-202ENST00000421069 APOBRQ0VD83 1088 aa7.3□□□□□ -1.24
VPS8-202ENST00000421069 SEPT6Q14141 434 aa7.3□□□□□ -1.24
VPS8-202ENST00000421069 MPP2Q14168 576 aa7.3□□□□□ -1.24
VPS8-202ENST00000421069 SLITRK4Q8IW52 837 aa7.3□□□□□ -1.24
VPS8-202ENST00000421069 BEND7Q8N7W2 519 aaPredicted RBP7.3□□□□□ -1.24
VPS8-202ENST00000421069 ZSCAN1Q8NBB4 408 aa7.3□□□□□ -1.24
VPS8-202ENST00000421069 JARID2Q92833 1246 aaPredicted RBP7.3□□□□□ -1.24
VPS8-202ENST00000421069 TANGO6Q9C0B7 1094 aa7.3□□□□□ -1.24
VPS8-202ENST00000421069 CCDC86Q9H6F5 360 aaKnown RBP7.3□□□□□ -1.24
VPS8-202ENST00000421069 NOP53Q9NZM5 478 aaKnown RBP7.3□□□□□ -1.24
VPS8-202ENST00000421069 USP35Q9P2H5 1018 aa7.3□□□□□ -1.24
VPS8-202ENST00000421069 PRKAG2Q9UGJ0 569 aa7.3□□□□□ -1.24
VPS8-202ENST00000421069 DDX3YO15523 660 aaKnown RBP7.29□□□□□ -1.24
VPS8-202ENST00000421069 IGSF3O75054 1194 aa7.29□□□□□ -1.24
VPS8-202ENST00000421069 ECEL1O95672 775 aa7.29□□□□□ -1.24
VPS8-202ENST00000421069 ELNP15502 786 aa7.29□□□□□ -1.24
VPS8-202ENST00000421069 DNAJA1P31689 397 aaKnown RBP7.29□□□□□ -1.24
VPS8-202ENST00000421069 TRIM28Q13263 835 aaKnown RBP7.29□□□□□ -1.24
VPS8-202ENST00000421069 PODNQ7Z5L7 613 aa7.29□□□□□ -1.24
VPS8-202ENST00000421069 GPBAR1Q8TDU6 330 aa7.29□□□□□ -1.24
VPS8-202ENST00000421069 NKD1Q969G9 470 aa7.29□□□□□ -1.24
VPS8-202ENST00000421069 ARMC5Q96C12 935 aa7.29□□□□□ -1.24
VPS8-202ENST00000421069 USP26Q9BXU7 913 aa7.29□□□□□ -1.24
VPS8-202ENST00000421069 ZC3H12CQ9C0D7 883 aaKnown RBP7.29□□□□□ -1.24
VPS8-202ENST00000421069 KCNK4Q9NYG8 393 aa7.29□□□□□ -1.24
VPS8-202ENST00000421069 UBP1Q9NZI7 540 aa7.29□□□□□ -1.24
VPS8-202ENST00000421069 MEGF11A6BM72 1044 aa7.28□□□□□ -1.24
VPS8-202ENST00000421069 ZNF862O60290 1169 aa7.28□□□□□ -1.24
VPS8-202ENST00000421069 BPNT1O95861 308 aa7.28□□□□□ -1.24
VPS8-202ENST00000421069 CTSBP07858 339 aa7.28□□□□□ -1.24
VPS8-202ENST00000421069 ATP2B1P20020 1258 aa7.28□□□□□ -1.24
VPS8-202ENST00000421069 CRKP46108 304 aa7.28□□□□□ -1.24
VPS8-202ENST00000421069 SOX9P48436 509 aa7.28□□□□□ -1.24
VPS8-202ENST00000421069 RPL6Q02878 288 aaKnown RBP7.28□□□□□ -1.24
VPS8-202ENST00000421069 PTPN11Q06124 597 aaPredicted RBP7.28□□□□□ -1.24
VPS8-202ENST00000421069 PDE3AQ14432 1141 aa7.28□□□□□ -1.24
VPS8-202ENST00000421069 CWF19L2Q2TBE0 894 aaKnown RBP7.28□□□□□ -1.24
VPS8-202ENST00000421069 KIF4BQ2VIQ3 1234 aa7.28□□□□□ -1.24
VPS8-202ENST00000421069 IGF2-ASQ6U949 168 aa7.28□□□□□ -1.24
VPS8-202ENST00000421069 MPRIPQ6WCQ1 1025 aa7.28□□□□□ -1.24
VPS8-202ENST00000421069 SNCAIPQ9Y6H5 919 aa7.28□□□□□ -1.24
VPS8-202ENST00000421069 FGRP09769 529 aa7.27□□□□□ -1.25
VPS8-202ENST00000421069 INSM1Q01101 510 aaPredicted RBP7.27□□□□□ -1.25
VPS8-202ENST00000421069 DUOXA2Q1HG44 320 aa7.27□□□□□ -1.25
VPS8-202ENST00000421069 PRRT3Q5FWE3 981 aa7.27□□□□□ -1.25
VPS8-202ENST00000421069 EXOSC6Q5RKV6 272 aaKnown RBP7.27□□□□□ -1.25
VPS8-202ENST00000421069 REC114Q7Z4M0 266 aa7.27□□□□□ -1.25
VPS8-202ENST00000421069 UBXN4Q92575 508 aa7.27□□□□□ -1.25
VPS8-202ENST00000421069 ACSBG1Q96GR2 724 aa7.27□□□□□ -1.25
VPS8-202ENST00000421069 GINM1Q9NU53 330 aa7.27□□□□□ -1.25
VPS8-202ENST00000421069 STRIP2Q9ULQ0 834 aa7.27□□□□□ -1.25
VPS8-202ENST00000421069 PCDHA4Q9UN74 947 aa7.27□□□□□ -1.25
VPS8-202ENST00000421069 EFR3BQ9Y2G0 817 aa7.27□□□□□ -1.25
VPS8-202ENST00000421069 TACC3Q9Y6A5 838 aa7.27□□□□□ -1.25
VPS8-202ENST00000421069 DLGAP3O95886 979 aa7.26□□□□□ -1.25
VPS8-202ENST00000421069 SLFN14P0C7P3 912 aa7.26□□□□□ -1.25
VPS8-202ENST00000421069 LIG1P18858 919 aa7.26□□□□□ -1.25
VPS8-202ENST00000421069 SEZ6Q53EL9 994 aa7.26□□□□□ -1.25
VPS8-202ENST00000421069 MCF2L2Q86YR7 1114 aa7.26□□□□□ -1.25
VPS8-202ENST00000421069 REXO1Q8N1G1 1221 aaKnown RBP7.26□□□□□ -1.25
VPS8-202ENST00000421069 FBXO27Q8NI29 283 aa7.26□□□□□ -1.25
VPS8-202ENST00000421069 UBASH3BQ8TF42 649 aa7.26□□□□□ -1.25
VPS8-202ENST00000421069 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.26□□□□□ -1.25
VPS8-202ENST00000421069 TMPRSS13Q9BYE2 586 aa7.26□□□□□ -1.25
VPS8-202ENST00000421069 MRPL18Q9H0U6 180 aaKnown RBP7.26□□□□□ -1.25
VPS8-202ENST00000421069 ADAMTS8Q9UP79 889 aa7.26□□□□□ -1.25
VPS8-202ENST00000421069 GFRA2O00451 464 aa7.25□□□□□ -1.25
VPS8-202ENST00000421069 TLR3O15455 904 aaKnown RBP7.25□□□□□ -1.25
VPS8-202ENST00000421069 AOC2O75106 756 aa7.25□□□□□ -1.25
VPS8-202ENST00000421069 NASPP49321 788 aaPredicted RBP7.25□□□□□ -1.25
VPS8-202ENST00000421069 ZNF165P49910 485 aa7.25□□□□□ -1.25
VPS8-202ENST00000421069 ZC3H12AQ5D1E8 599 aaKnown RBP7.25□□□□□ -1.25
VPS8-202ENST00000421069 HDXQ7Z353 690 aa7.25□□□□□ -1.25
VPS8-202ENST00000421069 WDR89Q96FK6 387 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms