RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 FAM83AQ86UY5 434 aa11.66□□□□□ -0.54
TRIM39-206ENST00000420746 MYLIPQ8WY64 445 aa11.66□□□□□ -0.54
TRIM39-206ENST00000420746 SLC45A1Q9Y2W3 748 aa11.66□□□□□ -0.54
TRIM39-206ENST00000420746 COL6A1P12109 1028 aa11.65□□□□□ -0.54
TRIM39-206ENST00000420746 GPAT2Q6NUI2 795 aa11.65□□□□□ -0.54
TRIM39-206ENST00000420746 COA7Q96BR5 231 aa11.65□□□□□ -0.54
TRIM39-206ENST00000420746 MPHOSPH8Q99549 860 aa11.65□□□□□ -0.54
TRIM39-206ENST00000420746 LBHD1Q9BQE6 289 aaPredicted RBP11.65□□□□□ -0.54
TRIM39-206ENST00000420746 HMX1Q9NP08 348 aaPredicted RBP11.65□□□□□ -0.54
TRIM39-206ENST00000420746 CXCL11O14625 94 aa11.64□□□□□ -0.55
TRIM39-206ENST00000420746 CYP2C8P10632 490 aa11.64□□□□□ -0.55
TRIM39-206ENST00000420746 RIPK4P57078 832 aa11.64□□□□□ -0.55
TRIM39-206ENST00000420746 SMAD3P84022 425 aaKnown RBP11.64□□□□□ -0.55
TRIM39-206ENST00000420746 CHRNDQ07001 517 aa11.64□□□□□ -0.55
TRIM39-206ENST00000420746 MAPK8IP2Q13387 824 aaPredicted RBP11.64□□□□□ -0.55
TRIM39-206ENST00000420746 FKBP1CQ5VVH2 108 aa11.64□□□□□ -0.55
TRIM39-206ENST00000420746 METTL22Q9BUU2 404 aaPredicted RBP11.64□□□□□ -0.55
TRIM39-206ENST00000420746 ZNF341Q9BYN7 854 aa11.64□□□□□ -0.55
TRIM39-206ENST00000420746 TTF2Q9UNY4 1162 aaKnown RBP11.64□□□□□ -0.55
TRIM39-206ENST00000420746 SPEF2Q9C093 1822 aa11.63□□□□□ -0.55
TRIM39-206ENST00000420746 CRKP46108 304 aa11.63□□□□□ -0.55
TRIM39-206ENST00000420746 HDLBPQ00341 1268 aaKnown RBP11.63□□□□□ -0.55
TRIM39-206ENST00000420746 NCBP3Q53F19 620 aaKnown RBP11.63□□□□□ -0.55
TRIM39-206ENST00000420746 MFSD14BQ5SR56 506 aa11.63□□□□□ -0.55
TRIM39-206ENST00000420746 NOL9Q5SY16 702 aaKnown RBP11.63□□□□□ -0.55
TRIM39-206ENST00000420746 FASTKD5Q7L8L6 764 aaKnown RBP11.63□□□□□ -0.55
TRIM39-206ENST00000420746 ATXN2LQ8WWM7 1075 aaKnown RBP11.63□□□□□ -0.55
TRIM39-206ENST00000420746 JARID2Q92833 1246 aaPredicted RBP11.63□□□□□ -0.55
TRIM39-206ENST00000420746 C1QTNF1Q9BXJ1 281 aa11.63□□□□□ -0.55
TRIM39-206ENST00000420746 TTYH1Q9H313 450 aaPredicted RBP11.63□□□□□ -0.55
TRIM39-206ENST00000420746 ZNF112Q9UJU3 913 aa11.63□□□□□ -0.55
TRIM39-206ENST00000420746 PIEZO1Q92508 2521 aa11.63□□□□□ -0.55
TRIM39-206ENST00000420746 ITGA6P23229 1130 aa11.62□□□□□ -0.55
TRIM39-206ENST00000420746 SNX27Q96L92 541 aa11.62□□□□□ -0.55
TRIM39-206ENST00000420746 MYH3P11055 1940 aa11.62□□□□□ -0.55
TRIM39-206ENST00000420746 DNAH12Q6ZR08 3092 aa11.61□□□□□ -0.55
TRIM39-206ENST00000420746 BDP1A6H8Y1 2624 aa11.61□□□□□ -0.55
TRIM39-206ENST00000420746 DDX58O95786 925 aaKnown RBP11.61□□□□□ -0.55
TRIM39-206ENST00000420746 INPP5BP32019 993 aa11.61□□□□□ -0.55
TRIM39-206ENST00000420746 LRRC26Q2I0M4 334 aa11.61□□□□□ -0.55
TRIM39-206ENST00000420746 MAP3K21Q5TCX8 1036 aa11.61□□□□□ -0.55
TRIM39-206ENST00000420746 PLA2G12BQ9BX93 195 aa11.61□□□□□ -0.55
TRIM39-206ENST00000420746 TMOD2Q9NZR1 351 aa11.61□□□□□ -0.55
TRIM39-206ENST00000420746 HCN4Q9Y3Q4 1203 aa11.61□□□□□ -0.55
TRIM39-206ENST00000420746 A0A0G2JLL6 359 aaPredicted RBP11.6□□□□□ -0.55
TRIM39-206ENST00000420746 FAM110CQ1W6H9 321 aa11.6□□□□□ -0.55
TRIM39-206ENST00000420746 PRRT2Q7Z6L0 340 aaPredicted RBP11.6□□□□□ -0.55
TRIM39-206ENST00000420746 PHAXQ9H814 394 aaKnown RBP11.6□□□□□ -0.55
TRIM39-206ENST00000420746 TAOK2Q9UL54 1235 aa11.6□□□□□ -0.55
TRIM39-206ENST00000420746 JAG2Q9Y219 1238 aa11.6□□□□□ -0.55
TRIM39-206ENST00000420746 DUSP27Q5VZP5 1158 aa11.59□□□□□ -0.55
TRIM39-206ENST00000420746 USP38Q8NB14 1042 aa11.59□□□□□ -0.55
TRIM39-206ENST00000420746 TDRD7Q8NHU6 1098 aaKnown RBP11.59□□□□□ -0.55
TRIM39-206ENST00000420746 SMCR8Q8TEV9 937 aaPredicted RBP11.59□□□□□ -0.55
TRIM39-206ENST00000420746 ASB2Q96Q27 587 aa11.59□□□□□ -0.55
TRIM39-206ENST00000420746 UHRF1Q96T88 793 aaPredicted RBP11.59□□□□□ -0.55
TRIM39-206ENST00000420746 MRIQ9BWK5 157 aa11.59□□□□□ -0.55
TRIM39-206ENST00000420746 SNAP23O00161 211 aa11.58□□□□□ -0.56
TRIM39-206ENST00000420746 IGKV5-2P06315 115 aa11.58□□□□□ -0.56
TRIM39-206ENST00000420746 CSF1RP07333 972 aa11.58□□□□□ -0.56
TRIM39-206ENST00000420746 TMPOP42166 694 aaKnown RBP11.58□□□□□ -0.56
TRIM39-206ENST00000420746 ADAMTS19Q8TE59 1207 aa11.58□□□□□ -0.56
TRIM39-206ENST00000420746 NCOR1O75376 2440 aa11.58□□□□□ -0.56
TRIM39-206ENST00000420746 H7C1W4 665 aa11.57□□□□□ -0.56
TRIM39-206ENST00000420746 TAF5LO75529 589 aa11.57□□□□□ -0.56
TRIM39-206ENST00000420746 CACNB3P54284 484 aa11.57□□□□□ -0.56
TRIM39-206ENST00000420746 SHHQ15465 462 aa11.57□□□□□ -0.56
TRIM39-206ENST00000420746 MIGA2Q7L4E1 593 aa11.57□□□□□ -0.56
TRIM39-206ENST00000420746 TEKT1Q969V4 418 aa11.57□□□□□ -0.56
TRIM39-206ENST00000420746 ZDHHC15Q96MV8 337 aa11.57□□□□□ -0.56
TRIM39-206ENST00000420746 THEGQ9P2T0 379 aa11.57□□□□□ -0.56
TRIM39-206ENST00000420746 PRKAG2Q9UGJ0 569 aa11.57□□□□□ -0.56
TRIM39-206ENST00000420746 GJD2Q9UKL4 321 aa11.57□□□□□ -0.56
TRIM39-206ENST00000420746 MAST2Q6P0Q8 1798 aa11.56□□□□□ -0.56
TRIM39-206ENST00000420746 ANKRD18BA2A2Z9 1011 aa11.56□□□□□ -0.56
TRIM39-206ENST00000420746 PRKAR2AP13861 404 aaKnown RBP11.56□□□□□ -0.56
TRIM39-206ENST00000420746 NEXNQ0ZGT2 675 aa11.56□□□□□ -0.56
TRIM39-206ENST00000420746 TRIM32Q13049 653 aa11.56□□□□□ -0.56
TRIM39-206ENST00000420746 TRMT44Q8IYL2 757 aaKnown RBP11.56□□□□□ -0.56
TRIM39-206ENST00000420746 ANKRD13CQ8N6S4 541 aa11.56□□□□□ -0.56
TRIM39-206ENST00000420746 TRIB2Q92519 343 aa11.56□□□□□ -0.56
TRIM39-206ENST00000420746 CHMP4AQ9BY43 222 aa11.56□□□□□ -0.56
TRIM39-206ENST00000420746 PNMA3Q9UL41 463 aa11.56□□□□□ -0.56
TRIM39-206ENST00000420746 MAP3K2Q9Y2U5 619 aa11.56□□□□□ -0.56
TRIM39-206ENST00000420746 A0A1B0GUL6 1792 aa11.55□□□□□ -0.56
TRIM39-206ENST00000420746 XRCC5P13010 732 aaKnown RBP11.55□□□□□ -0.56
TRIM39-206ENST00000420746 GCLCP48506 637 aaPredicted RBP11.55□□□□□ -0.56
TRIM39-206ENST00000420746 MRPS5P82675 430 aaKnown RBP11.55□□□□□ -0.56
TRIM39-206ENST00000420746 LHX8Q68G74 356 aa11.55□□□□□ -0.56
TRIM39-206ENST00000420746 APOBEC3HQ6NTF7 200 aaKnown RBP11.55□□□□□ -0.56
TRIM39-206ENST00000420746 KSR2Q6VAB6 950 aa11.55□□□□□ -0.56
TRIM39-206ENST00000420746 UBE3BQ7Z3V4 1068 aa11.55□□□□□ -0.56
TRIM39-206ENST00000420746 TBC1D22AQ8WUA7 517 aa11.55□□□□□ -0.56
TRIM39-206ENST00000420746 FAM151AQ8WW52 585 aa11.55□□□□□ -0.56
TRIM39-206ENST00000420746 AGTPBP1Q9UPW5 1226 aa11.55□□□□□ -0.56
TRIM39-206ENST00000420746 AFG3L2Q9Y4W6 797 aa11.55□□□□□ -0.56
TRIM39-206ENST00000420746 LTBP2Q14767 1821 aa11.55□□□□□ -0.56
TRIM39-206ENST00000420746 MAST3O60307 1309 aa11.55□□□□□ -0.56
TRIM39-206ENST00000420746 NEURL1BA8MQ27 555 aa11.54□□□□□ -0.56
TRIM39-206ENST00000420746 C9orf50Q5SZB4 431 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms