RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.31□□□□□ -0.76
SNCA-206ENST00000420646 PRDX5P30044 214 aa10.31□□□□□ -0.76
SNCA-206ENST00000420646 USP25Q9UHP3 1055 aa10.31□□□□□ -0.76
SNCA-206ENST00000420646 ANGEL1Q9UNK9 670 aaKnown RBP10.31□□□□□ -0.76
SNCA-206ENST00000420646 TRIM37O94972 964 aa10.31□□□□□ -0.76
SNCA-206ENST00000420646 TM4SF1P30408 202 aa10.31□□□□□ -0.76
SNCA-206ENST00000420646 TMEM67Q5HYA8 995 aa10.31□□□□□ -0.76
SNCA-206ENST00000420646 TRAPPC3LQ5T215 181 aa10.31□□□□□ -0.76
SNCA-206ENST00000420646 ZNF772Q68DY9 489 aaPredicted RBP10.31□□□□□ -0.76
SNCA-206ENST00000420646 IGDCC4Q8TDY8 1250 aa10.31□□□□□ -0.76
SNCA-206ENST00000420646 LLPHQ9BRT6 129 aaKnown RBP10.31□□□□□ -0.76
SNCA-206ENST00000420646 ESPNB1AK53 854 aa10.31□□□□□ -0.76
SNCA-206ENST00000420646 KIF28PB7ZC32 967 aa10.31□□□□□ -0.76
SNCA-206ENST00000420646 IFIT3O14879 490 aaKnown RBP10.31□□□□□ -0.76
SNCA-206ENST00000420646 CCDC173Q0VFZ6 552 aa10.31□□□□□ -0.76
SNCA-206ENST00000420646 CAVIN4Q5BKX8 364 aa10.31□□□□□ -0.76
SNCA-206ENST00000420646 SH2B2O14492 632 aaPredicted RBP10.3□□□□□ -0.76
SNCA-206ENST00000420646 METAP2P50579 478 aaKnown RBP eCLIP10.3□□□□□ -0.76
SNCA-206ENST00000420646 EVCP57679 992 aa10.3□□□□□ -0.76
SNCA-206ENST00000420646 APOA5Q6Q788 366 aa10.3□□□□□ -0.76
SNCA-206ENST00000420646 C8orf76Q96K31 380 aa10.3□□□□□ -0.76
SNCA-206ENST00000420646 PPP1R9BQ96SB3 815 aa10.3□□□□□ -0.76
SNCA-206ENST00000420646 SCAND2PQ9GZW5 306 aaPredicted RBP10.3□□□□□ -0.76
SNCA-206ENST00000420646 AATFQ9NY61 560 aaKnown RBP eCLIP10.3□□□□□ -0.76
SNCA-206ENST00000420646 LRP5O75197 1615 aa10.3□□□□□ -0.76
SNCA-206ENST00000420646 HMGN5P82970 282 aaKnown RBP10.3□□□□□ -0.76
SNCA-206ENST00000420646 MFSD6Q6ZSS7 791 aa10.3□□□□□ -0.76
SNCA-206ENST00000420646 FBXW7Q969H0 707 aa10.3□□□□□ -0.76
SNCA-206ENST00000420646 LY9Q9HBG7 655 aa10.3□□□□□ -0.76
SNCA-206ENST00000420646 ANKIB1Q9P2G1 1089 aa10.3□□□□□ -0.76
SNCA-206ENST00000420646 RTL9Q8NET4 1388 aa10.29□□□□□ -0.76
SNCA-206ENST00000420646 hCG_1642624A0A1W2PR95 340 aa10.29□□□□□ -0.76
SNCA-206ENST00000420646 UBE4AQ14139 1066 aa10.29□□□□□ -0.76
SNCA-206ENST00000420646 GRIK5Q16478 980 aa10.29□□□□□ -0.76
SNCA-206ENST00000420646 SLC10A5Q5PT55 438 aa10.29□□□□□ -0.76
SNCA-206ENST00000420646 RC3H1Q5TC82 1133 aaKnown RBP10.29□□□□□ -0.76
SNCA-206ENST00000420646 TICAM2Q86XR7 235 aa10.29□□□□□ -0.76
SNCA-206ENST00000420646 CLIC4Q9Y696 253 aa10.29□□□□□ -0.76
SNCA-206ENST00000420646 MYH7P12883 1935 aa10.29□□□□□ -0.76
SNCA-206ENST00000420646 ZNF804BA4D1E1 1349 aa10.29□□□□□ -0.76
SNCA-206ENST00000420646 MAGEB6P1A0A0J9YX57 407 aa10.29□□□□□ -0.76
SNCA-206ENST00000420646 AP5Z1O43299 807 aa10.29□□□□□ -0.76
SNCA-206ENST00000420646 GUCY1A2P33402 732 aa10.29□□□□□ -0.76
SNCA-206ENST00000420646 CSPP1Q1MSJ5 1256 aa10.29□□□□□ -0.76
SNCA-206ENST00000420646 AKNAD1Q5T1N1 836 aa10.29□□□□□ -0.76
SNCA-206ENST00000420646 ZNF830Q96NB3 372 aaPredicted RBP10.29□□□□□ -0.76
SNCA-206ENST00000420646 GOLPH3LQ9H4A5 285 aa10.29□□□□□ -0.76
SNCA-206ENST00000420646 FAM217BQ9NTX9 383 aaPredicted RBP10.29□□□□□ -0.76
SNCA-206ENST00000420646 COL5A3P25940 1745 aaPredicted RBP10.29□□□□□ -0.76
SNCA-206ENST00000420646 ATRNO75882 1429 aa10.29□□□□□ -0.76
SNCA-206ENST00000420646 BTAF1O14981 1849 aa10.29□□□□□ -0.76
SNCA-206ENST00000420646 RANBP6O60518 1105 aaKnown RBP10.29□□□□□ -0.76
SNCA-206ENST00000420646 ME1P48163 572 aa10.29□□□□□ -0.76
SNCA-206ENST00000420646 MECOMQ03112 1051 aa10.29□□□□□ -0.76
SNCA-206ENST00000420646 NAA16Q6N069 864 aaPredicted RBP10.29□□□□□ -0.76
SNCA-206ENST00000420646 NUP133Q8WUM0 1156 aa10.29□□□□□ -0.76
SNCA-206ENST00000420646 FUCA2Q9BTY2 467 aa10.29□□□□□ -0.76
SNCA-206ENST00000420646 NUP62CLQ9H1M0 184 aa10.29□□□□□ -0.76
SNCA-206ENST00000420646 GNL3LQ9NVN8 582 aaKnown RBP10.29□□□□□ -0.76
SNCA-206ENST00000420646 SPATA31A6Q5VVP1 1343 aa10.28□□□□□ -0.76
SNCA-206ENST00000420646 HIBADHP31937 336 aaKnown RBP10.28□□□□□ -0.76
SNCA-206ENST00000420646 FBXO18Q8NFZ0 1043 aa10.28□□□□□ -0.76
SNCA-206ENST00000420646 RIOK1Q9BRS2 568 aaKnown RBP10.28□□□□□ -0.76
SNCA-206ENST00000420646 NYXQ9GZU5 481 aa10.28□□□□□ -0.76
SNCA-206ENST00000420646 TNMDQ9H2S6 317 aa10.28□□□□□ -0.76
SNCA-206ENST00000420646 ZSCAN16Q9H4T2 348 aaPredicted RBP10.28□□□□□ -0.76
SNCA-206ENST00000420646 ZBTB43O43298 467 aa10.28□□□□□ -0.76
SNCA-206ENST00000420646 NMT2O60551 498 aa10.28□□□□□ -0.76
SNCA-206ENST00000420646 CYP2D6P10635 497 aa10.28□□□□□ -0.76
SNCA-206ENST00000420646 PPARAQ07869 468 aa10.28□□□□□ -0.76
SNCA-206ENST00000420646 UPF1Q92900 1129 aaKnown RBP eCLIP10.28□□□□□ -0.76
SNCA-206ENST00000420646 ELP1O95163 1332 aa10.27□□□□□ -0.76
SNCA-206ENST00000420646 GOLGA8AA7E2F4 631 aa10.27□□□□□ -0.76
SNCA-206ENST00000420646 FBXO33Q7Z6M2 555 aa10.27□□□□□ -0.76
SNCA-206ENST00000420646 LUZP1Q86V48 1076 aa10.27□□□□□ -0.76
SNCA-206ENST00000420646 CCAR1Q8IX12 1150 aaKnown RBP10.27□□□□□ -0.76
SNCA-206ENST00000420646 FBXL16Q8N461 479 aa10.27□□□□□ -0.76
SNCA-206ENST00000420646 CNBD1Q8NA66 436 aa10.27□□□□□ -0.76
SNCA-206ENST00000420646 ALG1Q9BT22 464 aa10.27□□□□□ -0.76
SNCA-206ENST00000420646 SLC26A6Q9BXS9 759 aa10.27□□□□□ -0.76
SNCA-206ENST00000420646 NACAP1Q9BZK3 213 aa10.27□□□□□ -0.76
SNCA-206ENST00000420646 SLC12A7Q9Y666 1083 aa10.27□□□□□ -0.76
SNCA-206ENST00000420646 RREB1Q92766 1687 aa10.27□□□□□ -0.77
SNCA-206ENST00000420646 A0A1B0GVL5 298 aa10.27□□□□□ -0.77
SNCA-206ENST00000420646 USP17L12C9JPN9 530 aa10.27□□□□□ -0.77
SNCA-206ENST00000420646 USP17L21D6R901 530 aa10.27□□□□□ -0.77
SNCA-206ENST00000420646 MARCKSP29966 332 aaPredicted RBP10.27□□□□□ -0.77
SNCA-206ENST00000420646 DIXDC1Q155Q3 683 aa10.27□□□□□ -0.77
SNCA-206ENST00000420646 NSUN4Q96CB9 384 aaKnown RBP10.27□□□□□ -0.77
SNCA-206ENST00000420646 PDLIM2Q96JY6 352 aa10.27□□□□□ -0.77
SNCA-206ENST00000420646 CFAP45Q9UL16 551 aa10.27□□□□□ -0.77
SNCA-206ENST00000420646 ALX1Q15699 326 aa10.27□□□□□ -0.77
SNCA-206ENST00000420646 NTRK3Q16288 839 aa10.27□□□□□ -0.77
SNCA-206ENST00000420646 MAP3K11Q16584 847 aa10.27□□□□□ -0.77
SNCA-206ENST00000420646 PRR5LQ6MZQ0 368 aa10.27□□□□□ -0.77
SNCA-206ENST00000420646 OLFM4Q6UX06 510 aa10.27□□□□□ -0.77
SNCA-206ENST00000420646 KCNJ14Q9UNX9 436 aa10.27□□□□□ -0.77
SNCA-206ENST00000420646 CCDC69A6NI79 296 aa10.26□□□□□ -0.77
SNCA-206ENST00000420646 DHX16O60231 1041 aaKnown RBP10.26□□□□□ -0.77
SNCA-206ENST00000420646 FAM47AQ5JRC9 791 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms