RNA–Protein interactions for RNA: ENST00000420377.6

PTPN22-202, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN22, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-202ENST00000420377 TSC1Q92574 1164 aa4.88□□□□□ -1.63
PTPN22-202ENST00000420377 ZDHHC16Q969W1 377 aa4.88□□□□□ -1.63
PTPN22-202ENST00000420377 PANK2Q9BZ23 570 aa4.88□□□□□ -1.63
PTPN22-202ENST00000420377 DEF6Q9H4E7 631 aa4.88□□□□□ -1.63
PTPN22-202ENST00000420377 RNF181Q9P0P0 153 aa4.88□□□□□ -1.63
PTPN22-202ENST00000420377 PUF60Q9UHX1 559 aaKnown RBP4.88□□□□□ -1.63
PTPN22-202ENST00000420377 KDM3BQ7LBC6 1761 aa4.88□□□□□ -1.63
PTPN22-202ENST00000420377 USP42Q9H9J4 1324 aaKnown RBP4.88□□□□□ -1.63
PTPN22-202ENST00000420377 LOC102724428A0A0B4J2F2 783 aa4.88□□□□□ -1.63
PTPN22-202ENST00000420377 POTECB2RU33 542 aa4.88□□□□□ -1.63
PTPN22-202ENST00000420377 DPEP1P16444 411 aa4.88□□□□□ -1.63
PTPN22-202ENST00000420377 COL9A1P20849 921 aa4.88□□□□□ -1.63
PTPN22-202ENST00000420377 GYS2P54840 703 aa4.88□□□□□ -1.63
PTPN22-202ENST00000420377 SIK1P57059 783 aa4.88□□□□□ -1.63
PTPN22-202ENST00000420377 GUCA2AQ02747 115 aa4.88□□□□□ -1.63
PTPN22-202ENST00000420377 ADCY2Q08462 1091 aa4.88□□□□□ -1.63
PTPN22-202ENST00000420377 CCDC173Q0VFZ6 552 aa4.88□□□□□ -1.63
PTPN22-202ENST00000420377 ARSIQ5FYB1 569 aa4.88□□□□□ -1.63
PTPN22-202ENST00000420377 RAPGEF4Q8WZA2 1011 aa4.88□□□□□ -1.63
PTPN22-202ENST00000420377 PPP1R9BQ96SB3 815 aa4.88□□□□□ -1.63
PTPN22-202ENST00000420377 BRIP1Q9BX63 1249 aa4.88□□□□□ -1.63
PTPN22-202ENST00000420377 RETREG1Q9H6L5 497 aa4.88□□□□□ -1.63
PTPN22-202ENST00000420377 CWC15Q9P013 229 aaKnown RBP4.88□□□□□ -1.63
PTPN22-202ENST00000420377 JRKLQ9Y4A0 524 aa4.88□□□□□ -1.63
PTPN22-202ENST00000420377 MEGF6O75095 1541 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 KIF7Q2M1P5 1343 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.87□□□□□ -1.63
PTPN22-202ENST00000420377 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.87□□□□□ -1.63
PTPN22-202ENST00000420377 TIMM44O43615 452 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 KIF5CO60282 957 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 GYS1P13807 737 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 ATP2B1P20020 1258 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 NOGQ13253 232 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 NUTM2GQ5VZR2 741 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 MICALL1Q8N3F8 863 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 SMCR8Q8TEV9 937 aaPredicted RBP4.87□□□□□ -1.63
PTPN22-202ENST00000420377 C17orf50Q8WW18 174 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 PRIMPOLQ96LW4 560 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 VEZTQ9HBM0 779 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 NLRP2Q9NX02 1062 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 HACL1Q9UJ83 578 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 COL1A1P02452 1464 aaPredicted RBP4.87□□□□□ -1.63
PTPN22-202ENST00000420377 UBR2Q8IWV8 1755 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 BICDL2A1A5D9 508 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 CFAP69A5D8W1 941 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 ALDH1B1P30837 517 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 HOXC9P31274 260 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 VEGFBP49765 207 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 PPP4CP60510 307 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 RAD51AP2Q09MP3 1159 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 TERF2Q15554 542 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 AKAP4Q5JQC9 854 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 WWC2Q6AWC2 1192 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 C16orf87Q6PH81 154 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 TMC4Q7Z404 712 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 CTU1Q7Z7A3 348 aaKnown RBP4.87□□□□□ -1.63
PTPN22-202ENST00000420377 SUGP1Q8IWZ8 645 aaKnown RBP4.87□□□□□ -1.63
PTPN22-202ENST00000420377 IFNL2Q8IZJ0 200 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 KIF2CQ99661 725 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 IQCGQ9H095 443 aaKnown RBP4.87□□□□□ -1.63
PTPN22-202ENST00000420377 GRPEL1Q9HAV7 217 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 HMX1Q9NP08 348 aaPredicted RBP4.87□□□□□ -1.63
PTPN22-202ENST00000420377 IRAK4Q9NWZ3 460 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 NRBP1Q9UHY1 535 aa4.87□□□□□ -1.63
PTPN22-202ENST00000420377 RBM47A0AV96 593 aaKnown RBP4.86□□□□□ -1.63
PTPN22-202ENST00000420377 MMP10P09238 476 aa4.86□□□□□ -1.63
PTPN22-202ENST00000420377 TNNT1P13805 278 aa4.86□□□□□ -1.63
PTPN22-202ENST00000420377 PRSS12P56730 875 aa4.86□□□□□ -1.63
PTPN22-202ENST00000420377 CCDC15Q0P6D6 951 aa4.86□□□□□ -1.63
PTPN22-202ENST00000420377 BECN1Q14457 450 aa4.86□□□□□ -1.63
PTPN22-202ENST00000420377 ARHGEF6Q15052 776 aa4.86□□□□□ -1.63
PTPN22-202ENST00000420377 PDCD2Q16342 344 aaPredicted RBP4.86□□□□□ -1.63
PTPN22-202ENST00000420377 NUDT18Q6ZVK8 323 aa4.86□□□□□ -1.63
PTPN22-202ENST00000420377 GPC2Q8N158 579 aa4.86□□□□□ -1.63
PTPN22-202ENST00000420377 TAF1DQ9H5J8 278 aaPredicted RBP4.86□□□□□ -1.63
PTPN22-202ENST00000420377 CABP1Q9NZU7 370 aa4.86□□□□□ -1.63
PTPN22-202ENST00000420377 TSKSQ9UJT2 592 aa4.86□□□□□ -1.63
PTPN22-202ENST00000420377 AFDNP55196 1824 aaKnown RBP4.86□□□□□ -1.63
PTPN22-202ENST00000420377 HMMRO75330 724 aa4.86□□□□□ -1.63
PTPN22-202ENST00000420377 ECEL1O95672 775 aa4.86□□□□□ -1.63
PTPN22-202ENST00000420377 IGHDP01880 384 aa4.86□□□□□ -1.63
PTPN22-202ENST00000420377 IMPDH2P12268 514 aa4.86□□□□□ -1.63
PTPN22-202ENST00000420377 PRMT2P55345 433 aa4.86□□□□□ -1.63
PTPN22-202ENST00000420377 FILIP1LQ4L180 1135 aa4.86□□□□□ -1.63
PTPN22-202ENST00000420377 MUM1L1Q5H9M0 696 aa4.86□□□□□ -1.63
PTPN22-202ENST00000420377 CATIPQ7Z7H3 387 aa4.86□□□□□ -1.63
PTPN22-202ENST00000420377 ZNF710Q8N1W2 664 aa4.86□□□□□ -1.63
PTPN22-202ENST00000420377 PDCL2Q8N4E4 241 aa4.86□□□□□ -1.63
PTPN22-202ENST00000420377 SUPT20HQ8NEM7 779 aa4.86□□□□□ -1.63
PTPN22-202ENST00000420377 TDRD7Q8NHU6 1098 aaKnown RBP4.86□□□□□ -1.63
PTPN22-202ENST00000420377 FMNL2Q96PY5 1086 aa4.86□□□□□ -1.63
PTPN22-202ENST00000420377 GNL3LQ9NVN8 582 aaKnown RBP4.86□□□□□ -1.63
PTPN22-202ENST00000420377 NARFQ9UHQ1 456 aa4.86□□□□□ -1.63
PTPN22-202ENST00000420377 CTDP1Q9Y5B0 961 aaPredicted RBP4.86□□□□□ -1.63
PTPN22-202ENST00000420377 FZD9O00144 591 aa4.85□□□□□ -1.63
PTPN22-202ENST00000420377 POLRMTO00411 1230 aaKnown RBP4.85□□□□□ -1.63
PTPN22-202ENST00000420377 POU5F1Q01860 360 aaKnown RBP4.85□□□□□ -1.63
PTPN22-202ENST00000420377 FKBP4Q02790 459 aaKnown RBP eCLIP4.85□□□□□ -1.63
PTPN22-202ENST00000420377 AP1ARQ63HQ0 302 aa4.85□□□□□ -1.63
PTPN22-202ENST00000420377 RSBN1LQ6PCB5 846 aaPredicted RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms