RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 MBD4O95243 580 aa17.02■□□□□ 0.32
SHMT1P1-201ENST00000419974 BAG3O95817 575 aa17.02■□□□□ 0.32
SHMT1P1-201ENST00000419974 FGAP02671 866 aa17.02■□□□□ 0.32
SHMT1P1-201ENST00000419974 PLCG2P16885 1265 aa17.02■□□□□ 0.32
SHMT1P1-201ENST00000419974 NT5C2P49902 561 aa17.02■□□□□ 0.32
SHMT1P1-201ENST00000419974 VPS53Q5VIR6 699 aa17.02■□□□□ 0.32
SHMT1P1-201ENST00000419974 ZNF277Q9NRM2 450 aaPredicted RBP17.02■□□□□ 0.32
SHMT1P1-201ENST00000419974 ATP8A2Q9NTI2 1148 aa17.02■□□□□ 0.32
SHMT1P1-201ENST00000419974 SNX14Q9Y5W7 946 aa17.02■□□□□ 0.32
SHMT1P1-201ENST00000419974 MYO5AQ9Y4I1 1855 aaKnown RBP17.02■□□□□ 0.32
SHMT1P1-201ENST00000419974 ZNF646O15015 1829 aaPredicted RBP17.02■□□□□ 0.31
SHMT1P1-201ENST00000419974 GSG1L2A8MUP6 293 aa17.01■□□□□ 0.31
SHMT1P1-201ENST00000419974 VEGFAP15692 232 aaPredicted RBP17.01■□□□□ 0.31
SHMT1P1-201ENST00000419974 GRIK5Q16478 980 aa17.01■□□□□ 0.31
SHMT1P1-201ENST00000419974 GMLQ99445 158 aa17.01■□□□□ 0.31
SHMT1P1-201ENST00000419974 NACAP1Q9BZK3 213 aa17.01■□□□□ 0.31
SHMT1P1-201ENST00000419974 SERPINA10Q9UK55 444 aa17.01■□□□□ 0.31
SHMT1P1-201ENST00000419974 PALD1Q9ULE6 856 aa17.01■□□□□ 0.31
SHMT1P1-201ENST00000419974 FSTL1Q12841 308 aa17■□□□□ 0.31
SHMT1P1-201ENST00000419974 NIM1KQ8IY84 436 aa17■□□□□ 0.31
SHMT1P1-201ENST00000419974 RASEFQ8IZ41 740 aa17■□□□□ 0.31
SHMT1P1-201ENST00000419974 LCORLQ8N3X6 602 aa17■□□□□ 0.31
SHMT1P1-201ENST00000419974 AGBL3Q8NEM8 1001 aa17■□□□□ 0.31
SHMT1P1-201ENST00000419974 ALDH8A1Q9H2A2 487 aaPredicted RBP17■□□□□ 0.31
SHMT1P1-201ENST00000419974 PSME4Q14997 1843 aa17■□□□□ 0.31
SHMT1P1-201ENST00000419974 COL4A5P29400 1685 aa17■□□□□ 0.31
SHMT1P1-201ENST00000419974 FZD9O00144 591 aa16.99■□□□□ 0.31
SHMT1P1-201ENST00000419974 CYP21A2P08686 494 aa16.99■□□□□ 0.31
SHMT1P1-201ENST00000419974 PSMA5P28066 241 aa16.99■□□□□ 0.31
SHMT1P1-201ENST00000419974 IMMTQ16891 758 aaKnown RBP16.99■□□□□ 0.31
SHMT1P1-201ENST00000419974 RSBN1LQ6PCB5 846 aaPredicted RBP16.99■□□□□ 0.31
SHMT1P1-201ENST00000419974 IFNL3Q8IZI9 196 aa16.99■□□□□ 0.31
SHMT1P1-201ENST00000419974 JDP2Q8WYK2 163 aa16.99■□□□□ 0.31
SHMT1P1-201ENST00000419974 ZDHHC15Q96MV8 337 aa16.99■□□□□ 0.31
SHMT1P1-201ENST00000419974 CRNKL1Q9BZJ0 848 aaKnown RBP16.99■□□□□ 0.31
SHMT1P1-201ENST00000419974 ARMT1Q9H993 441 aa16.99■□□□□ 0.31
SHMT1P1-201ENST00000419974 ZSWIM6Q9HCJ5 1215 aa16.99■□□□□ 0.31
SHMT1P1-201ENST00000419974 MKRN1Q9UHC7 482 aaKnown RBP16.99■□□□□ 0.31
SHMT1P1-201ENST00000419974 ANAPC4Q9UJX5 808 aa16.99■□□□□ 0.31
SHMT1P1-201ENST00000419974 TIAM2Q8IVF5 1701 aa16.99■□□□□ 0.31
SHMT1P1-201ENST00000419974 NPM3O75607 178 aaKnown RBP16.98■□□□□ 0.31
SHMT1P1-201ENST00000419974 HMGB1P09429 215 aaKnown RBP16.98■□□□□ 0.31
SHMT1P1-201ENST00000419974 PCP11498 1178 aaKnown RBP16.98■□□□□ 0.31
SHMT1P1-201ENST00000419974 MCM2P49736 904 aa16.98■□□□□ 0.31
SHMT1P1-201ENST00000419974 SBK1Q52WX2 424 aa16.98■□□□□ 0.31
SHMT1P1-201ENST00000419974 FBXL16Q8N461 479 aa16.98■□□□□ 0.31
SHMT1P1-201ENST00000419974 KCNQ5Q9NR82 932 aa16.98■□□□□ 0.31
SHMT1P1-201ENST00000419974 TAOK2Q9UL54 1235 aa16.98■□□□□ 0.31
SHMT1P1-201ENST00000419974 TTF2Q9UNY4 1162 aaKnown RBP16.98■□□□□ 0.31
SHMT1P1-201ENST00000419974 JAG2Q9Y219 1238 aa16.98■□□□□ 0.31
SHMT1P1-201ENST00000419974 SLC4A4Q9Y6R1 1079 aa16.98■□□□□ 0.31
SHMT1P1-201ENST00000419974 RPS12P25398 132 aaKnown RBP16.97■□□□□ 0.31
SHMT1P1-201ENST00000419974 APLP1P51693 650 aa16.97■□□□□ 0.31
SHMT1P1-201ENST00000419974 RHBDL3P58872 404 aa16.97■□□□□ 0.31
SHMT1P1-201ENST00000419974 TNIP1Q15025 636 aa16.97■□□□□ 0.31
SHMT1P1-201ENST00000419974 MIGA1Q8NAN2 632 aa16.97■□□□□ 0.31
SHMT1P1-201ENST00000419974 MTMR14Q8NCE2 650 aa16.97■□□□□ 0.31
SHMT1P1-201ENST00000419974 TEKT1Q969V4 418 aa16.97■□□□□ 0.31
SHMT1P1-201ENST00000419974 IPO9Q96P70 1041 aaKnown RBP16.97■□□□□ 0.31
SHMT1P1-201ENST00000419974 NOL10Q9BSC4 688 aaKnown RBP16.97■□□□□ 0.31
SHMT1P1-201ENST00000419974 EPB41L4AQ9HCS5 686 aaPredicted RBP16.97■□□□□ 0.31
SHMT1P1-201ENST00000419974 DAGLAQ9Y4D2 1042 aa16.97■□□□□ 0.31
SHMT1P1-201ENST00000419974 SCN9AQ15858 1988 aa16.97■□□□□ 0.31
SHMT1P1-201ENST00000419974 ZNF213O14771 459 aa16.96■□□□□ 0.31
SHMT1P1-201ENST00000419974 ST18O60284 1047 aa16.96■□□□□ 0.31
SHMT1P1-201ENST00000419974 DIXDC1Q155Q3 683 aa16.96■□□□□ 0.31
SHMT1P1-201ENST00000419974 AATFQ9NY61 560 aaKnown RBP eCLIP16.96■□□□□ 0.31
SHMT1P1-201ENST00000419974 WDR90Q96KV7 1748 aa16.96■□□□□ 0.31
SHMT1P1-201ENST00000419974 POTECB2RU33 542 aa16.96■□□□□ 0.3
SHMT1P1-201ENST00000419974 FGRP09769 529 aa16.96■□□□□ 0.3
SHMT1P1-201ENST00000419974 DYNLL1P63167 89 aaKnown RBP16.96■□□□□ 0.3
SHMT1P1-201ENST00000419974 CXCL9Q07325 125 aa16.96■□□□□ 0.3
SHMT1P1-201ENST00000419974 APOBEC3HQ6NTF7 200 aaKnown RBP16.96■□□□□ 0.3
SHMT1P1-201ENST00000419974 SMC1BQ8NDV3 1235 aa16.96■□□□□ 0.3
SHMT1P1-201ENST00000419974 NAPBQ9H115 298 aa16.96■□□□□ 0.3
SHMT1P1-201ENST00000419974 DCP1AQ9NPI6 582 aaPredicted RBP16.96■□□□□ 0.3
SHMT1P1-201ENST00000419974 WDR19Q8NEZ3 1342 aa16.95■□□□□ 0.3
SHMT1P1-201ENST00000419974 PSMD14O00487 310 aa16.95■□□□□ 0.3
SHMT1P1-201ENST00000419974 BTDP43251 543 aa16.95■□□□□ 0.3
SHMT1P1-201ENST00000419974 CRKP46108 304 aa16.95■□□□□ 0.3
SHMT1P1-201ENST00000419974 BECN1Q14457 450 aa16.95■□□□□ 0.3
SHMT1P1-201ENST00000419974 CIAPIN1Q6FI81 312 aa16.95■□□□□ 0.3
SHMT1P1-201ENST00000419974 RUFY3Q7L099 469 aa16.95■□□□□ 0.3
SHMT1P1-201ENST00000419974 DPF2Q92785 391 aa16.95■□□□□ 0.3
SHMT1P1-201ENST00000419974 TTC14Q96N46 770 aa16.95■□□□□ 0.3
SHMT1P1-201ENST00000419974 MTA3Q9BTC8 594 aa16.95■□□□□ 0.3
SHMT1P1-201ENST00000419974 ARPP21Q9UBL0 812 aaPredicted RBP16.95■□□□□ 0.3
SHMT1P1-201ENST00000419974 PRKAB2O43741 272 aa16.94■□□□□ 0.3
SHMT1P1-201ENST00000419974 APPP05067 770 aa16.94■□□□□ 0.3
SHMT1P1-201ENST00000419974 ADCK5Q3MIX3 580 aa16.94■□□□□ 0.3
SHMT1P1-201ENST00000419974 L3MBTL3Q96JM7 780 aaPredicted RBP16.94■□□□□ 0.3
SHMT1P1-201ENST00000419974 NEK1Q96PY6 1258 aa16.94■□□□□ 0.3
SHMT1P1-201ENST00000419974 HDAC9Q9UKV0 1011 aa16.94■□□□□ 0.3
SHMT1P1-201ENST00000419974 CYP46A1Q9Y6A2 500 aa16.94■□□□□ 0.3
SHMT1P1-201ENST00000419974 E7EWF7 191 aa16.93■□□□□ 0.3
SHMT1P1-201ENST00000419974 TDO2P48775 406 aa16.93■□□□□ 0.3
SHMT1P1-201ENST00000419974 NEK4P51957 841 aa16.93■□□□□ 0.3
SHMT1P1-201ENST00000419974 ZNF280AP59817 542 aaPredicted RBP16.93■□□□□ 0.3
SHMT1P1-201ENST00000419974 SH3RF3Q8TEJ3 882 aaPredicted RBP16.93■□□□□ 0.3
SHMT1P1-201ENST00000419974 STAG1Q8WVM7 1258 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms