RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 CLSTN2Q9H4D0 955 aa16.98■□□□□ 0.31
HLA-DPA1-242ENST00000419277 EPB41L4AQ9HCS5 686 aaPredicted RBP16.98■□□□□ 0.31
HLA-DPA1-242ENST00000419277 POLR3EQ9NVU0 708 aa16.98■□□□□ 0.31
HLA-DPA1-242ENST00000419277 ORC3Q9UBD5 711 aaPredicted RBP16.98■□□□□ 0.31
HLA-DPA1-242ENST00000419277 A0A0G2JLW4 131 aa16.97■□□□□ 0.31
HLA-DPA1-242ENST00000419277 ZBTB43O43298 467 aa16.97■□□□□ 0.31
HLA-DPA1-242ENST00000419277 MSNP26038 577 aaKnown RBP16.97■□□□□ 0.31
HLA-DPA1-242ENST00000419277 CERS3Q8IU89 383 aa16.97■□□□□ 0.31
HLA-DPA1-242ENST00000419277 NCOA5Q9HCD5 579 aaKnown RBP16.97■□□□□ 0.31
HLA-DPA1-242ENST00000419277 RTEL1Q9NZ71 1219 aa16.97■□□□□ 0.31
HLA-DPA1-242ENST00000419277 TRPC5Q9UL62 973 aaPredicted RBP16.97■□□□□ 0.31
HLA-DPA1-242ENST00000419277 DLEC1Q9Y238 1755 aa16.97■□□□□ 0.31
HLA-DPA1-242ENST00000419277 ECM29Q5VYK3 1845 aa16.97■□□□□ 0.31
HLA-DPA1-242ENST00000419277 FDPSP14324 419 aaKnown RBP16.96■□□□□ 0.31
HLA-DPA1-242ENST00000419277 FBXO33Q7Z6M2 555 aa16.96■□□□□ 0.31
HLA-DPA1-242ENST00000419277 FAM200AQ8TCP9 573 aa16.96■□□□□ 0.31
HLA-DPA1-242ENST00000419277 SLC4A4Q9Y6R1 1079 aa16.96■□□□□ 0.31
HLA-DPA1-242ENST00000419277 NEDD4P46934 1319 aa16.96■□□□□ 0.3
HLA-DPA1-242ENST00000419277 MAGEB6P1A0A0J9YX57 407 aa16.96■□□□□ 0.3
HLA-DPA1-242ENST00000419277 A0A1W2PQ27 194 aa16.96■□□□□ 0.3
HLA-DPA1-242ENST00000419277 A0A1W2PQ64 194 aa16.96■□□□□ 0.3
HLA-DPA1-242ENST00000419277 A0A1W2PQD8 194 aa16.96■□□□□ 0.3
HLA-DPA1-242ENST00000419277 ADD1P35611 737 aaKnown RBP16.96■□□□□ 0.3
HLA-DPA1-242ENST00000419277 CCDC73Q6ZRK6 1079 aa16.96■□□□□ 0.3
HLA-DPA1-242ENST00000419277 CHST3Q7LGC8 479 aa16.96■□□□□ 0.3
HLA-DPA1-242ENST00000419277 IGDCC4Q8TDY8 1250 aa16.96■□□□□ 0.3
HLA-DPA1-242ENST00000419277 BCL11BQ9C0K0 894 aaPredicted RBP16.96■□□□□ 0.3
HLA-DPA1-242ENST00000419277 DACT1Q9NYF0 836 aa16.96■□□□□ 0.3
HLA-DPA1-242ENST00000419277 NOL7Q9UMY1 257 aaKnown RBP16.96■□□□□ 0.3
HLA-DPA1-242ENST00000419277 COL1A1P02452 1464 aaPredicted RBP16.95■□□□□ 0.3
HLA-DPA1-242ENST00000419277 CCDC69A6NI79 296 aa16.95■□□□□ 0.3
HLA-DPA1-242ENST00000419277 B4E1Z4 1266 aa16.95■□□□□ 0.3
HLA-DPA1-242ENST00000419277 TMEM67Q5HYA8 995 aa16.95■□□□□ 0.3
HLA-DPA1-242ENST00000419277 SLC27A3Q5K4L6 730 aa16.95■□□□□ 0.3
HLA-DPA1-242ENST00000419277 TRAPPC3LQ5T215 181 aa16.95■□□□□ 0.3
HLA-DPA1-242ENST00000419277 MEX3CQ5U5Q3 659 aaKnown RBP16.95■□□□□ 0.3
HLA-DPA1-242ENST00000419277 SPTY2D1Q68D10 685 aaPredicted RBP16.95■□□□□ 0.3
HLA-DPA1-242ENST00000419277 ESR2Q92731 530 aa16.95■□□□□ 0.3
HLA-DPA1-242ENST00000419277 ARMT1Q9H993 441 aa16.95■□□□□ 0.3
HLA-DPA1-242ENST00000419277 LY9Q9HBG7 655 aa16.95■□□□□ 0.3
HLA-DPA1-242ENST00000419277 SLC12A7Q9Y666 1083 aa16.95■□□□□ 0.3
HLA-DPA1-242ENST00000419277 COL4A1P02462 1669 aa16.95■□□□□ 0.3
HLA-DPA1-242ENST00000419277 CYP7A1P22680 504 aa16.94■□□□□ 0.3
HLA-DPA1-242ENST00000419277 RFC4P35249 363 aa16.94■□□□□ 0.3
HLA-DPA1-242ENST00000419277 FAM84BQ96KN1 310 aaPredicted RBP16.94■□□□□ 0.3
HLA-DPA1-242ENST00000419277 RAI14Q9P0K7 980 aa16.94■□□□□ 0.3
HLA-DPA1-242ENST00000419277 TNRC6CQ9HCJ0 1690 aaKnown RBP16.94■□□□□ 0.3
HLA-DPA1-242ENST00000419277 TAF1P21675 1872 aa16.94■□□□□ 0.3
HLA-DPA1-242ENST00000419277 TPM3P06753 285 aa16.93■□□□□ 0.3
HLA-DPA1-242ENST00000419277 FAM160A1Q05DH4 1040 aa16.93■□□□□ 0.3
HLA-DPA1-242ENST00000419277 TRIM29Q14134 588 aa16.93■□□□□ 0.3
HLA-DPA1-242ENST00000419277 ADALQ6DHV7 355 aa16.93■□□□□ 0.3
HLA-DPA1-242ENST00000419277 NFXL1Q6ZNB6 911 aa16.93■□□□□ 0.3
HLA-DPA1-242ENST00000419277 CYB5R4Q7L1T6 521 aa16.93■□□□□ 0.3
HLA-DPA1-242ENST00000419277 LCORLQ8N3X6 602 aa16.93■□□□□ 0.3
HLA-DPA1-242ENST00000419277 JMYQ8N9B5 988 aa16.93■□□□□ 0.3
HLA-DPA1-242ENST00000419277 LEMD3Q9Y2U8 911 aa16.93■□□□□ 0.3
HLA-DPA1-242ENST00000419277 GOLGA8AA7E2F4 631 aa16.93■□□□□ 0.3
HLA-DPA1-242ENST00000419277 IFIT3O14879 490 aaKnown RBP16.93■□□□□ 0.3
HLA-DPA1-242ENST00000419277 IFNAR1P17181 557 aa16.93■□□□□ 0.3
HLA-DPA1-242ENST00000419277 HIBADHP31937 336 aaKnown RBP16.93■□□□□ 0.3
HLA-DPA1-242ENST00000419277 PPARAQ07869 468 aa16.93■□□□□ 0.3
HLA-DPA1-242ENST00000419277 FAM173BQ6P4H8 233 aa16.93■□□□□ 0.3
HLA-DPA1-242ENST00000419277 C15orf52Q6ZUT6 534 aaKnown RBP16.93■□□□□ 0.3
HLA-DPA1-242ENST00000419277 TRIM22Q8IYM9 498 aa16.93■□□□□ 0.3
HLA-DPA1-242ENST00000419277 RNF214Q8ND24 703 aa16.93■□□□□ 0.3
HLA-DPA1-242ENST00000419277 CELF1Q92879 486 aaKnown RBP16.93■□□□□ 0.3
HLA-DPA1-242ENST00000419277 ARHGEF1Q92888 912 aaKnown RBP16.93■□□□□ 0.3
HLA-DPA1-242ENST00000419277 PGBD1Q96JS3 809 aa16.93■□□□□ 0.3
HLA-DPA1-242ENST00000419277 RIOK1Q9BRS2 568 aaKnown RBP16.93■□□□□ 0.3
HLA-DPA1-242ENST00000419277 TFIP11Q9UBB9 837 aaKnown RBP16.93■□□□□ 0.3
HLA-DPA1-242ENST00000419277 USP25Q9UHP3 1055 aa16.93■□□□□ 0.3
HLA-DPA1-242ENST00000419277 KINO60870 393 aaKnown RBP16.92■□□□□ 0.3
HLA-DPA1-242ENST00000419277 FGRP09769 529 aa16.92■□□□□ 0.3
HLA-DPA1-242ENST00000419277 LIG1P18858 919 aa16.92■□□□□ 0.3
HLA-DPA1-242ENST00000419277 IARSP41252 1262 aaKnown RBP16.92■□□□□ 0.3
HLA-DPA1-242ENST00000419277 WTAPQ15007 396 aa16.92■□□□□ 0.3
HLA-DPA1-242ENST00000419277 MYSM1Q5VVJ2 828 aa16.92■□□□□ 0.3
HLA-DPA1-242ENST00000419277 SASS6Q6UVJ0 657 aa16.92■□□□□ 0.3
HLA-DPA1-242ENST00000419277 USP28Q96RU2 1077 aa16.92■□□□□ 0.3
HLA-DPA1-242ENST00000419277 UBAC1Q9BSL1 405 aa16.92■□□□□ 0.3
HLA-DPA1-242ENST00000419277 RRAGDQ9NQL2 400 aaPredicted RBP16.92■□□□□ 0.3
HLA-DPA1-242ENST00000419277 ABCF2Q9UG63 623 aa16.92■□□□□ 0.3
HLA-DPA1-242ENST00000419277 KDM4AO75164 1064 aa16.91■□□□□ 0.3
HLA-DPA1-242ENST00000419277 SLC3A2P08195 630 aaKnown RBP16.91■□□□□ 0.3
HLA-DPA1-242ENST00000419277 GYG1P46976 350 aa16.91■□□□□ 0.3
HLA-DPA1-242ENST00000419277 TYRO3Q06418 890 aa16.91■□□□□ 0.3
HLA-DPA1-242ENST00000419277 MRPS27Q92552 414 aaKnown RBP16.91■□□□□ 0.3
HLA-DPA1-242ENST00000419277 ATP8A2Q9NTI2 1148 aa16.91■□□□□ 0.3
HLA-DPA1-242ENST00000419277 ZSWIM5Q9P217 1185 aa16.91■□□□□ 0.3
HLA-DPA1-242ENST00000419277 AFF2P51816 1311 aa16.91■□□□□ 0.3
HLA-DPA1-242ENST00000419277 MYH6P13533 1939 aa16.9■□□□□ 0.3
HLA-DPA1-242ENST00000419277 CALM1P0DP23 149 aa16.9■□□□□ 0.3
HLA-DPA1-242ENST00000419277 CALM2P0DP24 149 aa16.9■□□□□ 0.3
HLA-DPA1-242ENST00000419277 CALM3P0DP25 149 aa16.9■□□□□ 0.3
HLA-DPA1-242ENST00000419277 KIF23Q02241 960 aaPredicted RBP16.9■□□□□ 0.3
HLA-DPA1-242ENST00000419277 GRAPQ13588 217 aa16.9■□□□□ 0.3
HLA-DPA1-242ENST00000419277 NTRK3Q16288 839 aa16.9■□□□□ 0.3
HLA-DPA1-242ENST00000419277 BICDL1Q6ZP65 573 aa16.9■□□□□ 0.3
HLA-DPA1-242ENST00000419277 C3orf67Q6ZVT6 689 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms