RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 ITGA6P23229 1130 aa12.6□□□□□ -0.39
PTCH1-205ENST00000418258 PUM3Q15397 648 aaKnown RBP12.6□□□□□ -0.39
PTCH1-205ENST00000418258 UAP1Q16222 522 aaPredicted RBP12.6□□□□□ -0.39
PTCH1-205ENST00000418258 NAP1L4Q99733 375 aaKnown RBP12.6□□□□□ -0.39
PTCH1-205ENST00000418258 ASXL2Q76L83 1435 aa12.6□□□□□ -0.39
PTCH1-205ENST00000418258 TBC1D31Q96DN5 1066 aa12.6□□□□□ -0.39
PTCH1-205ENST00000418258 AATFQ9NY61 560 aaKnown RBP eCLIP12.6□□□□□ -0.39
PTCH1-205ENST00000418258 TTC41PQ6P2S7 1318 aa12.6□□□□□ -0.39
PTCH1-205ENST00000418258 FMNL3Q8IVF7 1028 aa12.59□□□□□ -0.39
PTCH1-205ENST00000418258 TRIM7Q9C029 511 aa12.59□□□□□ -0.39
PTCH1-205ENST00000418258 MCM6Q14566 821 aa12.59□□□□□ -0.39
PTCH1-205ENST00000418258 CREB3L3Q68CJ9 461 aa12.59□□□□□ -0.39
PTCH1-205ENST00000418258 NIM1KQ8IY84 436 aa12.59□□□□□ -0.39
PTCH1-205ENST00000418258 ARHGAP45Q92619 1136 aa12.59□□□□□ -0.39
PTCH1-205ENST00000418258 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.59□□□□□ -0.39
PTCH1-205ENST00000418258 HSPA4P34932 840 aa12.59□□□□□ -0.39
PTCH1-205ENST00000418258 PPP1R21Q6ZMI0 780 aa12.59□□□□□ -0.39
PTCH1-205ENST00000418258 CPXCR1Q8N123 301 aa12.59□□□□□ -0.39
PTCH1-205ENST00000418258 TSGA10Q9BZW7 698 aa12.59□□□□□ -0.39
PTCH1-205ENST00000418258 ZRANB1Q9UGI0 708 aa12.59□□□□□ -0.39
PTCH1-205ENST00000418258 MAST3O60307 1309 aa12.59□□□□□ -0.39
PTCH1-205ENST00000418258 ZNF518AQ6AHZ1 1483 aa12.59□□□□□ -0.39
PTCH1-205ENST00000418258 ZNF174Q15697 407 aa12.59□□□□□ -0.39
PTCH1-205ENST00000418258 INF2Q27J81 1249 aa12.59□□□□□ -0.39
PTCH1-205ENST00000418258 UVSSAQ2YD98 709 aa12.59□□□□□ -0.39
PTCH1-205ENST00000418258 PPP1R9BQ96SB3 815 aa12.59□□□□□ -0.39
PTCH1-205ENST00000418258 DACT1Q9NYF0 836 aa12.59□□□□□ -0.39
PTCH1-205ENST00000418258 AZI2Q9H6S1 392 aa12.59□□□□□ -0.39
PTCH1-205ENST00000418258 ARFGAP3Q9NP61 516 aa12.59□□□□□ -0.39
PTCH1-205ENST00000418258 DNAI1Q9UI46 699 aa12.59□□□□□ -0.39
PTCH1-205ENST00000418258 MTUS1Q9ULD2 1270 aa12.59□□□□□ -0.39
PTCH1-205ENST00000418258 GUCA1BQ9UMX6 200 aa12.59□□□□□ -0.39
PTCH1-205ENST00000418258 YTHDC2Q9H6S0 1430 aaKnown RBP12.59□□□□□ -0.39
PTCH1-205ENST00000418258 CCDC160A6NGH7 325 aa12.59□□□□□ -0.39
PTCH1-205ENST00000418258 TRAF5O00463 557 aa12.58□□□□□ -0.39
PTCH1-205ENST00000418258 SKILP12757 684 aa12.58□□□□□ -0.39
PTCH1-205ENST00000418258 SEL1L2Q5TEA6 688 aa12.58□□□□□ -0.39
PTCH1-205ENST00000418258 CCDC129Q6ZRS4 1044 aa12.58□□□□□ -0.39
PTCH1-205ENST00000418258 FNBP4Q8N3X1 1017 aaPredicted RBP12.58□□□□□ -0.39
PTCH1-205ENST00000418258 DNAJC25Q9H1X3 360 aa12.58□□□□□ -0.39
PTCH1-205ENST00000418258 TRPM2O94759 1503 aa12.58□□□□□ -0.4
PTCH1-205ENST00000418258 ZBTB24O43167 697 aaPredicted RBP12.58□□□□□ -0.4
PTCH1-205ENST00000418258 APBA3O96018 575 aa12.58□□□□□ -0.4
PTCH1-205ENST00000418258 MRPL50Q8N5N7 158 aaKnown RBP12.58□□□□□ -0.4
PTCH1-205ENST00000418258 ANKRD44Q8N8A2 993 aa12.58□□□□□ -0.4
PTCH1-205ENST00000418258 IFT81Q8WYA0 676 aa12.58□□□□□ -0.4
PTCH1-205ENST00000418258 RNMTO43148 476 aaKnown RBP12.58□□□□□ -0.4
PTCH1-205ENST00000418258 ZBED4O75132 1171 aa12.58□□□□□ -0.4
PTCH1-205ENST00000418258 IQUBQ8NA54 791 aa12.58□□□□□ -0.4
PTCH1-205ENST00000418258 CCDC87Q9NVE4 849 aa12.58□□□□□ -0.4
PTCH1-205ENST00000418258 H7C1D1 291 aa12.58□□□□□ -0.4
PTCH1-205ENST00000418258 LEO1Q8WVC0 666 aaPredicted RBP12.58□□□□□ -0.4
PTCH1-205ENST00000418258 TTC14Q96N46 770 aa12.58□□□□□ -0.4
PTCH1-205ENST00000418258 GTPBP4Q9BZE4 634 aaKnown RBP12.58□□□□□ -0.4
PTCH1-205ENST00000418258 KCNK9Q9NPC2 374 aa12.58□□□□□ -0.4
PTCH1-205ENST00000418258 RRP9O43818 475 aaKnown RBP12.58□□□□□ -0.4
PTCH1-205ENST00000418258 IRX3P78415 501 aaPredicted RBP12.58□□□□□ -0.4
PTCH1-205ENST00000418258 HDAC1Q13547 482 aaPredicted RBP12.58□□□□□ -0.4
PTCH1-205ENST00000418258 SPC25Q9HBM1 224 aa12.58□□□□□ -0.4
PTCH1-205ENST00000418258 DHX32Q7L7V1 743 aaKnown RBP12.58□□□□□ -0.4
PTCH1-205ENST00000418258 ARHGEF35A5YM69 484 aa12.57□□□□□ -0.4
PTCH1-205ENST00000418258 RUFY3Q7L099 469 aa12.57□□□□□ -0.4
PTCH1-205ENST00000418258 TRERF1Q96PN7 1200 aa12.57□□□□□ -0.4
PTCH1-205ENST00000418258 CALUO43852 315 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-205ENST00000418258 SUPT20HQ8NEM7 779 aa12.57□□□□□ -0.4
PTCH1-205ENST00000418258 WDR66Q8TBY9 1149 aa12.57□□□□□ -0.4
PTCH1-205ENST00000418258 CDCA7Q9BWT1 371 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-205ENST00000418258 STK10O94804 968 aaKnown RBP12.57□□□□□ -0.4
PTCH1-205ENST00000418258 DNM2P50570 870 aa12.57□□□□□ -0.4
PTCH1-205ENST00000418258 HAUS3Q68CZ6 603 aa12.57□□□□□ -0.4
PTCH1-205ENST00000418258 ZNF830Q96NB3 372 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-205ENST00000418258 CTNND2Q9UQB3 1225 aa12.57□□□□□ -0.4
PTCH1-205ENST00000418258 GSDMBQ8TAX9 411 aa12.57□□□□□ -0.4
PTCH1-205ENST00000418258 ATRIPQ8WXE1 791 aa12.57□□□□□ -0.4
PTCH1-205ENST00000418258 FAM204AQ9H8W3 233 aa12.57□□□□□ -0.4
PTCH1-205ENST00000418258 HAUS2Q9NVX0 235 aa12.57□□□□□ -0.4
PTCH1-205ENST00000418258 CALCOCO1Q9P1Z2 691 aa12.57□□□□□ -0.4
PTCH1-205ENST00000418258 OPA1O60313 960 aa12.57□□□□□ -0.4
PTCH1-205ENST00000418258 DKC1O60832 514 aaKnown RBP eCLIP12.57□□□□□ -0.4
PTCH1-205ENST00000418258 MTRF1LQ9UGC7 380 aaKnown RBP12.57□□□□□ -0.4
PTCH1-205ENST00000418258 SRRTQ9BXP5 876 aaKnown RBP12.57□□□□□ -0.4
PTCH1-205ENST00000418258 USP21Q9UK80 565 aa12.57□□□□□ -0.4
PTCH1-205ENST00000418258 IRX5P78411 483 aaPredicted RBP12.56□□□□□ -0.4
PTCH1-205ENST00000418258 PARP10Q53GL7 1025 aa12.56□□□□□ -0.4
PTCH1-205ENST00000418258 BRAPQ7Z569 592 aa12.56□□□□□ -0.4
PTCH1-205ENST00000418258 ARMT1Q9H993 441 aa12.56□□□□□ -0.4
PTCH1-205ENST00000418258 F13A1P00488 732 aa12.56□□□□□ -0.4
PTCH1-205ENST00000418258 PPP2R5DQ14738 602 aa12.56□□□□□ -0.4
PTCH1-205ENST00000418258 TBC1D32Q96NH3 1257 aa12.56□□□□□ -0.4
PTCH1-205ENST00000418258 EXOC7Q9UPT5 735 aa12.56□□□□□ -0.4
PTCH1-205ENST00000418258 B4E1Z4 1266 aa12.56□□□□□ -0.4
PTCH1-205ENST00000418258 DAAM2Q86T65 1068 aa12.56□□□□□ -0.4
PTCH1-205ENST00000418258 SLC1A4P43007 532 aa12.56□□□□□ -0.4
PTCH1-205ENST00000418258 CCDC24Q8N4L8 307 aa12.56□□□□□ -0.4
PTCH1-205ENST00000418258 RPRD2Q5VT52 1461 aaKnown RBP12.56□□□□□ -0.4
PTCH1-205ENST00000418258 SPOPO43791 374 aa12.56□□□□□ -0.4
PTCH1-205ENST00000418258 CCDC125Q86Z20 511 aa12.56□□□□□ -0.4
PTCH1-205ENST00000418258 CSRNP2Q9H175 543 aa12.56□□□□□ -0.4
PTCH1-205ENST00000418258 LZTFL1Q9NQ48 299 aa12.56□□□□□ -0.4
PTCH1-205ENST00000418258 TTLL3Q9Y4R7 772 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms