RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 BRD2P25440 801 aaKnown RBP9.18□□□□□ -0.94
HMGXB4-202ENST00000418170 SPECC1LQ69YQ0 1117 aa9.18□□□□□ -0.94
HMGXB4-202ENST00000418170 PDILTQ8N807 584 aa9.18□□□□□ -0.94
HMGXB4-202ENST00000418170 CCDC8Q9H0W5 538 aaPredicted RBP9.18□□□□□ -0.94
HMGXB4-202ENST00000418170 TLR7Q9NYK1 1049 aaKnown RBP9.18□□□□□ -0.94
HMGXB4-202ENST00000418170 USP8P40818 1118 aa9.18□□□□□ -0.94
HMGXB4-202ENST00000418170 ADKP55263 362 aaKnown RBP9.18□□□□□ -0.94
HMGXB4-202ENST00000418170 PLEKHO1Q53GL0 409 aaPredicted RBP9.18□□□□□ -0.94
HMGXB4-202ENST00000418170 DHX32Q7L7V1 743 aaKnown RBP9.18□□□□□ -0.94
HMGXB4-202ENST00000418170 C19orf44Q9H6X5 657 aa9.18□□□□□ -0.94
HMGXB4-202ENST00000418170 IGSF1Q8N6C5 1336 aa9.18□□□□□ -0.94
HMGXB4-202ENST00000418170 SIPA1L3O60292 1781 aaPredicted RBP9.18□□□□□ -0.94
HMGXB4-202ENST00000418170 SHOX2O60902 331 aaPredicted RBP9.17□□□□□ -0.94
HMGXB4-202ENST00000418170 HNRNPH1P31943 449 aaKnown RBP9.17□□□□□ -0.94
HMGXB4-202ENST00000418170 CCT2P78371 535 aaKnown RBP9.17□□□□□ -0.94
HMGXB4-202ENST00000418170 TXNDC2Q86VQ3 553 aa9.17□□□□□ -0.94
HMGXB4-202ENST00000418170 CTCFLQ8NI51 663 aaPredicted RBP9.17□□□□□ -0.94
HMGXB4-202ENST00000418170 SUFUQ9UMX1 484 aa9.17□□□□□ -0.94
HMGXB4-202ENST00000418170 USP6P35125 1406 aa9.17□□□□□ -0.94
HMGXB4-202ENST00000418170 KIF5CO60282 957 aa9.17□□□□□ -0.94
HMGXB4-202ENST00000418170 SYF2O95926 243 aaKnown RBP9.17□□□□□ -0.94
HMGXB4-202ENST00000418170 RHOXF2BP0C7M4 288 aa9.17□□□□□ -0.94
HMGXB4-202ENST00000418170 MNAT1P51948 309 aa9.17□□□□□ -0.94
HMGXB4-202ENST00000418170 WDR93Q6P2C0 686 aa9.17□□□□□ -0.94
HMGXB4-202ENST00000418170 KCNV1Q6PIU1 500 aa9.17□□□□□ -0.94
HMGXB4-202ENST00000418170 STOX1Q6ZVD7 989 aa9.17□□□□□ -0.94
HMGXB4-202ENST00000418170 RHOXF2Q9BQY4 288 aa9.17□□□□□ -0.94
HMGXB4-202ENST00000418170 NCOA5Q9HCD5 579 aaKnown RBP9.17□□□□□ -0.94
HMGXB4-202ENST00000418170 ARHGEF25Q86VW2 580 aa9.17□□□□□ -0.94
HMGXB4-202ENST00000418170 IL17REQ8NFR9 667 aa9.17□□□□□ -0.94
HMGXB4-202ENST00000418170 MROH7-TTC4A0A0A0MT08 1334 aa9.17□□□□□ -0.94
HMGXB4-202ENST00000418170 MTF1Q14872 753 aa9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 EP400NLQ6ZTU2 488 aa9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 LZTFL1Q9NQ48 299 aa9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 FDPSP14324 419 aaKnown RBP9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 LIG3P49916 1009 aa9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 MYSM1Q5VVJ2 828 aa9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 OLFM4Q6UX06 510 aa9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 CLIC6Q96NY7 704 aa9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 ADGRG1Q9Y653 693 aa9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 ADAMTS7Q9UKP4 1686 aa9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 CTAGE9A4FU28 777 aa9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 EXOSC10Q01780 885 aaKnown RBP9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 BRAPQ7Z569 592 aa9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 EYA1Q99502 592 aa9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 RFX7Q2KHR2 1363 aa9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 ZNF609O15014 1411 aa9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 CDHR2Q9BYE9 1310 aa9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 CTAGE15A4D2H0 777 aa9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 CTAGE8P0CG41 777 aa9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 SYKP43405 635 aa9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 PIP4K2BP78356 416 aa9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 WHAMMP3Q1A5X7 153 aa9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 KIF4BQ2VIQ3 1234 aa9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 CTAGE6Q86UF2 777 aa9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 CTAGE4Q8IX94 777 aa9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 ZNF274Q96GC6 653 aaPredicted RBP9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 PANX2Q96RD6 677 aa9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 CHPF2Q9P2E5 772 aa9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 HPSEQ9Y251 543 aa9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 FAM169AQ9Y6X4 670 aa9.16□□□□□ -0.94
HMGXB4-202ENST00000418170 ABCA3Q99758 1704 aa9.15□□□□□ -0.94
HMGXB4-202ENST00000418170 FLT4P35916 1363 aa9.15□□□□□ -0.94
HMGXB4-202ENST00000418170 PPFIA3O75145 1194 aa9.15□□□□□ -0.94
HMGXB4-202ENST00000418170 POLR3DP05423 398 aaPredicted RBP9.15□□□□□ -0.94
HMGXB4-202ENST00000418170 PDIA3P30101 505 aaKnown RBP9.15□□□□□ -0.94
HMGXB4-202ENST00000418170 G3BP1Q13283 466 aaKnown RBP eCLIP9.15□□□□□ -0.94
HMGXB4-202ENST00000418170 C9orf78Q9NZ63 289 aaPredicted RBP9.15□□□□□ -0.94
HMGXB4-202ENST00000418170 MRC1P22897 1456 aa9.15□□□□□ -0.94
HMGXB4-202ENST00000418170 SOWAHDA6NJG2 315 aa9.15□□□□□ -0.94
HMGXB4-202ENST00000418170 PNOCQ13519 176 aa9.15□□□□□ -0.94
HMGXB4-202ENST00000418170 ZNF569Q5MCW4 686 aa9.15□□□□□ -0.94
HMGXB4-202ENST00000418170 ANO1Q5XXA6 986 aa9.15□□□□□ -0.94
HMGXB4-202ENST00000418170 IGSF22Q8N9C0 903 aa9.15□□□□□ -0.94
HMGXB4-202ENST00000418170 EDC3Q96F86 508 aaKnown RBP9.15□□□□□ -0.94
HMGXB4-202ENST00000418170 TACO1Q9BSH4 297 aaKnown RBP9.15□□□□□ -0.94
HMGXB4-202ENST00000418170 ZC3H4Q9UPT8 1303 aaKnown RBP9.15□□□□□ -0.95
HMGXB4-202ENST00000418170 EBAG9O00559 213 aa9.15□□□□□ -0.95
HMGXB4-202ENST00000418170 ZNF18P17022 549 aa9.15□□□□□ -0.95
HMGXB4-202ENST00000418170 EIF2S2P20042 333 aaKnown RBP9.15□□□□□ -0.95
HMGXB4-202ENST00000418170 FBXW10Q5XX13 1052 aa9.15□□□□□ -0.95
HMGXB4-202ENST00000418170 POTEDQ86YR6 584 aa9.15□□□□□ -0.95
HMGXB4-202ENST00000418170 CNPY4Q8N129 248 aa9.15□□□□□ -0.95
HMGXB4-202ENST00000418170 SMARCC1Q92922 1105 aaPredicted RBP9.15□□□□□ -0.95
HMGXB4-202ENST00000418170 A1CFQ9NQ94 594 aaKnown RBP9.15□□□□□ -0.95
HMGXB4-202ENST00000418170 HOXB7P09629 217 aa9.14□□□□□ -0.95
HMGXB4-202ENST00000418170 CCT5P48643 541 aa9.14□□□□□ -0.95
HMGXB4-202ENST00000418170 RAD9BQ6WBX8 426 aa9.14□□□□□ -0.95
HMGXB4-202ENST00000418170 SYNE3Q6ZMZ3 975 aa9.14□□□□□ -0.95
HMGXB4-202ENST00000418170 CCDC129Q6ZRS4 1044 aa9.14□□□□□ -0.95
HMGXB4-202ENST00000418170 NOA1Q8NC60 698 aaKnown RBP9.14□□□□□ -0.95
HMGXB4-202ENST00000418170 CARD10Q9BWT7 1032 aa9.14□□□□□ -0.95
HMGXB4-202ENST00000418170 NAA15Q9BXJ9 866 aaKnown RBP9.14□□□□□ -0.95
HMGXB4-202ENST00000418170 HPCAL4Q9UM19 191 aa9.14□□□□□ -0.95
HMGXB4-202ENST00000418170 TBX22Q9Y458 520 aa9.14□□□□□ -0.95
HMGXB4-202ENST00000418170 A0A0U1RQJ8 604 aa9.14□□□□□ -0.95
HMGXB4-202ENST00000418170 FAM237AA0A1B0GTK4 181 aa9.14□□□□□ -0.95
HMGXB4-202ENST00000418170 AKR1B15C9JRZ8 316 aaPredicted RBP9.14□□□□□ -0.95
HMGXB4-202ENST00000418170 TFRCP02786 760 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms