RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 SLKQ9H2G2 1235 aaPredicted RBP24.67■■□□□ 1.54
CASC3-203ENST00000418132 PPP1R1BQ9UD71 204 aaPredicted RBP24.67■■□□□ 1.54
CASC3-203ENST00000418132 ZNF646O15015 1829 aaPredicted RBP24.66■■□□□ 1.54
CASC3-203ENST00000418132 TDO2P48775 406 aa24.66■■□□□ 1.54
CASC3-203ENST00000418132 GIMAP6Q6P9H5 292 aa24.66■■□□□ 1.54
CASC3-203ENST00000418132 CRNKL1Q9BZJ0 848 aaKnown RBP24.66■■□□□ 1.54
CASC3-203ENST00000418132 LIMCH1Q9UPQ0 1083 aa24.66■■□□□ 1.54
CASC3-203ENST00000418132 SCN9AQ15858 1988 aa24.66■■□□□ 1.54
CASC3-203ENST00000418132 PPIP5K2O43314 1243 aa24.65■■□□□ 1.54
CASC3-203ENST00000418132 HSP90AA1P07900 732 aaKnown RBP24.65■■□□□ 1.54
CASC3-203ENST00000418132 DHX32Q7L7V1 743 aaKnown RBP24.65■■□□□ 1.54
CASC3-203ENST00000418132 SLF2Q8IX21 1173 aa24.65■■□□□ 1.54
CASC3-203ENST00000418132 FKBP1AP62942 108 aaKnown RBP24.65■■□□□ 1.54
CASC3-203ENST00000418132 CUL4AQ13619 759 aa24.65■■□□□ 1.54
CASC3-203ENST00000418132 STRIP1Q5VSL9 837 aa24.65■■□□□ 1.54
CASC3-203ENST00000418132 NOL8Q76FK4 1167 aaKnown RBP24.65■■□□□ 1.54
CASC3-203ENST00000418132 FBXW7Q969H0 707 aa24.65■■□□□ 1.54
CASC3-203ENST00000418132 VPS33BQ9H267 617 aa24.65■■□□□ 1.54
CASC3-203ENST00000418132 TIAM2Q8IVF5 1701 aa24.65■■□□□ 1.54
CASC3-203ENST00000418132 GAKO14976 1311 aa24.64■■□□□ 1.54
CASC3-203ENST00000418132 BAG3O95817 575 aa24.64■■□□□ 1.54
CASC3-203ENST00000418132 EXOSC10Q01780 885 aaKnown RBP24.64■■□□□ 1.54
CASC3-203ENST00000418132 ANKRD1Q15327 319 aa24.64■■□□□ 1.54
CASC3-203ENST00000418132 CERS3Q8IU89 383 aa24.64■■□□□ 1.54
CASC3-203ENST00000418132 TCEANC2Q96MN5 208 aa24.64■■□□□ 1.54
CASC3-203ENST00000418132 KCNQ5Q9NR82 932 aa24.64■■□□□ 1.54
CASC3-203ENST00000418132 GPR75-ASB3A0A0A6YYF3 556 aa24.63■■□□□ 1.53
CASC3-203ENST00000418132 DDIT3P35638 169 aa24.63■■□□□ 1.53
CASC3-203ENST00000418132 TBC1D10CQ8IV04 446 aa24.63■■□□□ 1.53
CASC3-203ENST00000418132 ATP8A2Q9NTI2 1148 aa24.63■■□□□ 1.53
CASC3-203ENST00000418132 KLHL34Q8N239 644 aa24.63■■□□□ 1.53
CASC3-203ENST00000418132 NOL10Q9BSC4 688 aaKnown RBP24.63■■□□□ 1.53
CASC3-203ENST00000418132 TOB2Q14106 344 aaPredicted RBP24.62■■□□□ 1.53
CASC3-203ENST00000418132 DACT2Q5SW24 774 aa24.62■■□□□ 1.53
CASC3-203ENST00000418132 NCOA7Q8NI08 942 aa24.62■■□□□ 1.53
CASC3-203ENST00000418132 SPON1Q9HCB6 807 aa24.62■■□□□ 1.53
CASC3-203ENST00000418132 MXD3Q9BW11 206 aa24.62■■□□□ 1.53
CASC3-203ENST00000418132 DCP1AQ9NPI6 582 aaPredicted RBP24.62■■□□□ 1.53
CASC3-203ENST00000418132 FER1L6Q2WGJ9 1857 aa24.61■■□□□ 1.53
CASC3-203ENST00000418132 BAZ2AQ9UIF9 1905 aaKnown RBP24.61■■□□□ 1.53
CASC3-203ENST00000418132 USP17L3A6NCW0 530 aa24.61■■□□□ 1.53
CASC3-203ENST00000418132 USP17L4A6NCW7 530 aa24.61■■□□□ 1.53
CASC3-203ENST00000418132 NFKBIBQ15653 356 aa24.61■■□□□ 1.53
CASC3-203ENST00000418132 ILDR2Q71H61 639 aa24.61■■□□□ 1.53
CASC3-203ENST00000418132 USP17L1Q7RTZ2 530 aa24.61■■□□□ 1.53
CASC3-203ENST00000418132 MB21D2Q8IYB1 491 aaPredicted RBP24.61■■□□□ 1.53
CASC3-203ENST00000418132 ZSCAN31Q96LW9 406 aaPredicted RBP24.61■■□□□ 1.53
CASC3-203ENST00000418132 ANAPC4Q9UJX5 808 aa24.61■■□□□ 1.53
CASC3-203ENST00000418132 PSME4Q14997 1843 aa24.6■■□□□ 1.53
CASC3-203ENST00000418132 BTDP43251 543 aa24.6■■□□□ 1.53
CASC3-203ENST00000418132 SH3RF3Q8TEJ3 882 aaPredicted RBP24.6■■□□□ 1.53
CASC3-203ENST00000418132 LARP6Q9BRS8 491 aaKnown RBP24.6■■□□□ 1.53
CASC3-203ENST00000418132 AGXT2Q9BYV1 514 aa24.6■■□□□ 1.53
CASC3-203ENST00000418132 FOXD4L1Q9NU39 408 aa24.6■■□□□ 1.53
CASC3-203ENST00000418132 TTF2Q9UNY4 1162 aaKnown RBP24.6■■□□□ 1.53
CASC3-203ENST00000418132 PPARAQ07869 468 aa24.6■■□□□ 1.53
CASC3-203ENST00000418132 TRDNQ13061 729 aa24.6■■□□□ 1.53
CASC3-203ENST00000418132 Q6ZUG5 572 aa24.6■■□□□ 1.53
CASC3-203ENST00000418132 RALYLQ86SE5 291 aaKnown RBP24.6■■□□□ 1.53
CASC3-203ENST00000418132 INTS4Q96HW7 963 aaKnown RBP24.6■■□□□ 1.53
CASC3-203ENST00000418132 ZNF277Q9NRM2 450 aaPredicted RBP24.6■■□□□ 1.53
CASC3-203ENST00000418132 YDJCA8MPS7 323 aa24.59■■□□□ 1.53
CASC3-203ENST00000418132 CTDSPL2Q05D32 466 aa24.59■■□□□ 1.53
CASC3-203ENST00000418132 AKNAD1Q5T1N1 836 aa24.59■■□□□ 1.53
CASC3-203ENST00000418132 FBXL16Q8N461 479 aa24.59■■□□□ 1.53
CASC3-203ENST00000418132 STAG1Q8WVM7 1258 aa24.59■■□□□ 1.53
CASC3-203ENST00000418132 SH2B1Q9NRF2 756 aaPredicted RBP24.59■■□□□ 1.53
CASC3-203ENST00000418132 MKRN1Q9UHC7 482 aaKnown RBP24.59■■□□□ 1.53
CASC3-203ENST00000418132 TPCN1Q9ULQ1 816 aa24.59■■□□□ 1.53
CASC3-203ENST00000418132 DAGLAQ9Y4D2 1042 aa24.59■■□□□ 1.53
CASC3-203ENST00000418132 WDR19Q8NEZ3 1342 aa24.59■■□□□ 1.53
CASC3-203ENST00000418132 GOLGB1Q14789 3259 aaKnown RBP24.59■■□□□ 1.53
CASC3-203ENST00000418132 PLCG2P16885 1265 aa24.58■■□□□ 1.53
CASC3-203ENST00000418132 MCM5P33992 734 aa24.58■■□□□ 1.53
CASC3-203ENST00000418132 CTR9Q6PD62 1173 aa24.58■■□□□ 1.53
CASC3-203ENST00000418132 LARGE2Q8N3Y3 721 aa24.58■■□□□ 1.53
CASC3-203ENST00000418132 COL4A5P29400 1685 aa24.58■■□□□ 1.53
CASC3-203ENST00000418132 F8W031 263 aaPredicted RBP24.57■■□□□ 1.52
CASC3-203ENST00000418132 LARGE1O95461 756 aa24.57■■□□□ 1.52
CASC3-203ENST00000418132 RHBDL3P58872 404 aa24.57■■□□□ 1.52
CASC3-203ENST00000418132 SBK1Q52WX2 424 aa24.57■■□□□ 1.52
CASC3-203ENST00000418132 MRIQ9BWK5 157 aa24.57■■□□□ 1.52
CASC3-203ENST00000418132 CNNM2Q9H8M5 875 aa24.57■■□□□ 1.52
CASC3-203ENST00000418132 TACC3Q9Y6A5 838 aa24.57■■□□□ 1.52
CASC3-203ENST00000418132 CDK5RAP2Q96SN8 1893 aa24.57■■□□□ 1.52
CASC3-203ENST00000418132 NEDD4P46934 1319 aa24.57■■□□□ 1.52
CASC3-203ENST00000418132 LAMB1P07942 1786 aa24.57■■□□□ 1.52
CASC3-203ENST00000418132 USP17L12C9JPN9 530 aa24.56■■□□□ 1.52
CASC3-203ENST00000418132 USP17L21D6R901 530 aa24.56■■□□□ 1.52
CASC3-203ENST00000418132 ME3Q16798 604 aa24.56■■□□□ 1.52
CASC3-203ENST00000418132 HHIPL2Q6UWX4 724 aa24.56■■□□□ 1.52
CASC3-203ENST00000418132 MFSD6Q6ZSS7 791 aa24.56■■□□□ 1.52
CASC3-203ENST00000418132 LRRC2Q9BYS8 371 aa24.56■■□□□ 1.52
CASC3-203ENST00000418132 CWC22Q9HCG8 908 aaKnown RBP24.56■■□□□ 1.52
CASC3-203ENST00000418132 CHMP5Q9NZZ3 219 aa24.56■■□□□ 1.52
CASC3-203ENST00000418132 ARPP21Q9UBL0 812 aaPredicted RBP24.56■■□□□ 1.52
CASC3-203ENST00000418132 CIZ1Q9ULV3 898 aaPredicted RBP24.56■■□□□ 1.52
CASC3-203ENST00000418132 BCS1LQ9Y276 419 aa24.56■■□□□ 1.52
CASC3-203ENST00000418132 MINDY4BA8MYZ0 360 aa24.56■■□□□ 1.52
CASC3-203ENST00000418132 IARSP41252 1262 aaKnown RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms