RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 FAAP100Q0VG06 881 aa6.22□□□□□ -1.41
HMGB3P20-201ENST00000417997 DSC3Q14574 896 aa6.22□□□□□ -1.41
HMGB3P20-201ENST00000417997 RPS26P11Q5JNZ5 115 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P20-201ENST00000417997 NXPE4Q6UWF7 544 aa6.22□□□□□ -1.41
HMGB3P20-201ENST00000417997 GLIS3Q8NEA6 775 aa6.22□□□□□ -1.41
HMGB3P20-201ENST00000417997 ACTL7BQ9Y614 415 aa6.22□□□□□ -1.41
HMGB3P20-201ENST00000417997 LIG1P18858 919 aa6.21□□□□□ -1.42
HMGB3P20-201ENST00000417997 ASPAP45381 313 aa6.21□□□□□ -1.42
HMGB3P20-201ENST00000417997 CD97P48960 835 aa6.21□□□□□ -1.42
HMGB3P20-201ENST00000417997 PPP2R3AQ06190 1150 aa6.21□□□□□ -1.42
HMGB3P20-201ENST00000417997 ENOX2Q16206 610 aaKnown RBP6.21□□□□□ -1.42
HMGB3P20-201ENST00000417997 OSBPL1AQ9BXW6 950 aa6.21□□□□□ -1.42
HMGB3P20-201ENST00000417997 AOC2O75106 756 aa6.2□□□□□ -1.42
HMGB3P20-201ENST00000417997 MED26O95402 600 aa6.2□□□□□ -1.42
HMGB3P20-201ENST00000417997 NFICP08651 508 aa6.2□□□□□ -1.42
HMGB3P20-201ENST00000417997 INTS5Q6P9B9 1019 aaKnown RBP6.2□□□□□ -1.42
HMGB3P20-201ENST00000417997 KCNB2Q92953 911 aa6.2□□□□□ -1.42
HMGB3P20-201ENST00000417997 TBC1D32Q96NH3 1257 aa6.2□□□□□ -1.42
HMGB3P20-201ENST00000417997 CCDC86Q9H6F5 360 aaKnown RBP6.2□□□□□ -1.42
HMGB3P20-201ENST00000417997 LGR6Q9HBX8 967 aa6.2□□□□□ -1.42
HMGB3P20-201ENST00000417997 FAM105AQ9NUU6 356 aa6.2□□□□□ -1.42
HMGB3P20-201ENST00000417997 TMEM39AQ9NV64 488 aa6.2□□□□□ -1.42
HMGB3P20-201ENST00000417997 LEMD3Q9Y2U8 911 aa6.2□□□□□ -1.42
HMGB3P20-201ENST00000417997 PRR19A6NJB7 356 aa6.19□□□□□ -1.42
HMGB3P20-201ENST00000417997 F13BP05160 661 aa6.19□□□□□ -1.42
HMGB3P20-201ENST00000417997 XRCC5P13010 732 aaKnown RBP6.19□□□□□ -1.42
HMGB3P20-201ENST00000417997 ATP2B2Q01814 1243 aa6.19□□□□□ -1.42
HMGB3P20-201ENST00000417997 SETDB2Q96T68 719 aa6.19□□□□□ -1.42
HMGB3P20-201ENST00000417997 WDR18Q9BV38 432 aa6.19□□□□□ -1.42
HMGB3P20-201ENST00000417997 TRAIPQ9BWF2 469 aa6.19□□□□□ -1.42
HMGB3P20-201ENST00000417997 PIM2Q9P1W9 311 aa6.19□□□□□ -1.42
HMGB3P20-201ENST00000417997 DAGLAQ9Y4D2 1042 aa6.19□□□□□ -1.42
HMGB3P20-201ENST00000417997 ABCC8Q09428 1581 aa6.18□□□□□ -1.42
HMGB3P20-201ENST00000417997 GSTP1P09211 210 aaKnown RBP6.18□□□□□ -1.42
HMGB3P20-201ENST00000417997 HNRNPUQ00839 825 aaKnown RBP eCLIP6.18□□□□□ -1.42
HMGB3P20-201ENST00000417997 MAP7Q14244 749 aa6.18□□□□□ -1.42
HMGB3P20-201ENST00000417997 AEBP1Q8IUX7 1158 aa6.18□□□□□ -1.42
HMGB3P20-201ENST00000417997 SHISA5Q8N114 240 aa6.18□□□□□ -1.42
HMGB3P20-201ENST00000417997 WDR89Q96FK6 387 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P20-201ENST00000417997 ASB16Q96NS5 453 aa6.18□□□□□ -1.42
HMGB3P20-201ENST00000417997 PIDD1Q9HB75 910 aa6.18□□□□□ -1.42
HMGB3P20-201ENST00000417997 CBX8Q9HC52 389 aa6.18□□□□□ -1.42
HMGB3P20-201ENST00000417997 PRKAG2Q9UGJ0 569 aa6.18□□□□□ -1.42
HMGB3P20-201ENST00000417997 WWC3Q9ULE0 1092 aa6.18□□□□□ -1.42
HMGB3P20-201ENST00000417997 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P20-201ENST00000417997 PATL2C9JE40 543 aaKnown RBP6.17□□□□□ -1.42
HMGB3P20-201ENST00000417997 SLFN14P0C7P3 912 aa6.17□□□□□ -1.42
HMGB3P20-201ENST00000417997 ADMP35318 185 aa6.17□□□□□ -1.42
HMGB3P20-201ENST00000417997 FMR1Q06787 632 aaKnown RBP eCLIP6.17□□□□□ -1.42
HMGB3P20-201ENST00000417997 TPTE2Q6XPS3 522 aa6.17□□□□□ -1.42
HMGB3P20-201ENST00000417997 SULF2Q8IWU5 870 aa6.17□□□□□ -1.42
HMGB3P20-201ENST00000417997 EZH1Q92800 747 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P20-201ENST00000417997 SEMA6CQ9H3T2 930 aa6.17□□□□□ -1.42
HMGB3P20-201ENST00000417997 PPP1R9AQ9ULJ8 1098 aa6.17□□□□□ -1.42
HMGB3P20-201ENST00000417997 FAM170BA6NMN3 283 aa6.16□□□□□ -1.42
HMGB3P20-201ENST00000417997 FBXO24O75426 580 aa6.16□□□□□ -1.42
HMGB3P20-201ENST00000417997 GSTT1P30711 240 aa6.16□□□□□ -1.42
HMGB3P20-201ENST00000417997 HOXA10P31260 410 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P20-201ENST00000417997 ALG1LQ6GMV1 187 aa6.16□□□□□ -1.42
HMGB3P20-201ENST00000417997 ZAR1Q86SH2 424 aa6.16□□□□□ -1.42
HMGB3P20-201ENST00000417997 FBF1Q8TES7 1133 aa6.16□□□□□ -1.42
HMGB3P20-201ENST00000417997 METTL22Q9BUU2 404 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P20-201ENST00000417997 LRRC4CQ9HCJ2 640 aa6.16□□□□□ -1.42
HMGB3P20-201ENST00000417997 KIAA1324LA8MWY0 1029 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P20-201ENST00000417997 TMPRSS2O15393 492 aa6.15□□□□□ -1.42
HMGB3P20-201ENST00000417997 CYP26A1O43174 497 aa6.15□□□□□ -1.42
HMGB3P20-201ENST00000417997 DYNC1LI2O43237 492 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P20-201ENST00000417997 ZNF862O60290 1169 aa6.15□□□□□ -1.42
HMGB3P20-201ENST00000417997 RNGTTO60942 597 aaKnown RBP6.15□□□□□ -1.42
HMGB3P20-201ENST00000417997 P4HBP07237 508 aaKnown RBP6.15□□□□□ -1.42
HMGB3P20-201ENST00000417997 ARNTP27540 789 aa6.15□□□□□ -1.42
HMGB3P20-201ENST00000417997 ID3Q02535 119 aa6.15□□□□□ -1.42
HMGB3P20-201ENST00000417997 DUSP27Q5VZP5 1158 aa6.15□□□□□ -1.42
HMGB3P20-201ENST00000417997 MAP1SQ66K74 1059 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P20-201ENST00000417997 ACSBG1Q96GR2 724 aa6.15□□□□□ -1.42
HMGB3P20-201ENST00000417997 OSBPL7Q9BZF2 842 aa6.15□□□□□ -1.42
HMGB3P20-201ENST00000417997 ATXN3LQ9H3M9 355 aa6.15□□□□□ -1.42
HMGB3P20-201ENST00000417997 ACSS3Q9H6R3 686 aa6.15□□□□□ -1.42
HMGB3P20-201ENST00000417997 SPG7Q9UQ90 795 aa6.15□□□□□ -1.42
HMGB3P20-201ENST00000417997 LDHBP07195 334 aaKnown RBP6.14□□□□□ -1.43
HMGB3P20-201ENST00000417997 PDIA4P13667 645 aaKnown RBP6.14□□□□□ -1.43
HMGB3P20-201ENST00000417997 FOSL1P15407 271 aa6.14□□□□□ -1.43
HMGB3P20-201ENST00000417997 C3orf58Q8NDZ4 430 aa6.14□□□□□ -1.43
HMGB3P20-201ENST00000417997 STK35Q8TDR2 534 aa6.14□□□□□ -1.43
HMGB3P20-201ENST00000417997 EMILIN2Q9BXX0 1053 aa6.14□□□□□ -1.43
HMGB3P20-201ENST00000417997 SSU72Q9NP77 194 aaKnown RBP6.14□□□□□ -1.43
HMGB3P20-201ENST00000417997 KRT82Q9NSB4 513 aa6.14□□□□□ -1.43
HMGB3P20-201ENST00000417997 CRIM1Q9NZV1 1036 aa6.14□□□□□ -1.43
HMGB3P20-201ENST00000417997 WNT11O96014 354 aa6.13□□□□□ -1.43
HMGB3P20-201ENST00000417997 HCLS1P14317 486 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P20-201ENST00000417997 SPINK2P20155 84 aa6.13□□□□□ -1.43
HMGB3P20-201ENST00000417997 NME2P22392 152 aa6.13□□□□□ -1.43
HMGB3P20-201ENST00000417997 GP2P55259 537 aaKnown RBP6.13□□□□□ -1.43
HMGB3P20-201ENST00000417997 CYP27A1Q02318 531 aa6.13□□□□□ -1.43
HMGB3P20-201ENST00000417997 KIF4BQ2VIQ3 1234 aa6.13□□□□□ -1.43
HMGB3P20-201ENST00000417997 ZNF765Q7L2R6 523 aa6.13□□□□□ -1.43
HMGB3P20-201ENST00000417997 DTX1Q86Y01 620 aa6.13□□□□□ -1.43
HMGB3P20-201ENST00000417997 FANCD2OSQ96PS1 177 aa6.13□□□□□ -1.43
HMGB3P20-201ENST00000417997 CEP44Q9C0F1 390 aa6.13□□□□□ -1.43
HMGB3P20-201ENST00000417997 SRCIN1Q9C0H9 1055 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms